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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1430.1_01626
Locus scaffold1430.1 : 80116 ... 123212 : +
To GenomeBrowser scaffold1430.1:80116..123212
Genes list of scaffold scaffold1430.1
Synonym pfu_aug1.0_3287.1_23273

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1430.1_01626.t1 3 1 MFS_1 199 275 1.3e-24 86.5 1.5e-11 1.1e-07 30.8
pfu_aug2.0_1430.1_01626.t1 3 2 MFS_1 377 533 1.3e-24 86.5 4.6e-13 3.4e-09 35.8
pfu_aug2.0_1430.1_01626.t1 3 3 MFS_1 532 600 1.3e-24 86.5 6.0e-11 4.5e-07 28.9
pfu_aug2.0_1430.1_01626.t1 2 1 p450 589 831 0.0 209.0 8.2e-21 6.1e-17 61.2
pfu_aug2.0_1430.1_01626.t1 2 2 p450 829 966 0.0 209.0 0.0 3.69943e-43 147.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1430.1_01626.t1 gi|149930901|gb|ABR45717.1| 0.0
pfu_aug2.0_1430.1_01626.t1 gi|676488504|ref|XP_009064638.1| hypothetical protein LOTGIDRAFT_204704 [Lottia gigantea] 0.0
pfu_aug2.0_1430.1_01626.t1 gi|676488498|ref|XP_009064636.1| hypothetical protein LOTGIDRAFT_131752 [Lottia gigantea] 0.0
pfu_aug2.0_1430.1_01626.t1 gi|260781928|ref|XP_002586047.1| hypothetical protein BRAFLDRAFT_145601 [Branchiostoma floridae] 0.0
pfu_aug2.0_1430.1_01626.t1 gi|260823548|ref|XP_002604245.1| hypothetical protein BRAFLDRAFT_211258 [Branchiostoma floridae] 0.0

Transcript
Transcript IDpfu_aug2.0_1430.1_01626.t1
Definition-
>pfu_aug2.0_1430.1_01626.t1
atgcatatgacgcctctgtacgctttcgcggatgtaaccacagataactacggatcgaggtcaatgctcaggtcgttggg
agtcgttgtcagtcctaacaatcagtacctatcagtagcaatccgcaatagcaaagaatattttgaacacgctcaaaact
taatcgtacgactccgttggtcggcttcggataaaagtgccgtagaggtcgcagcttcttgtaggggagtcttattcctg
gcagcccgaggatatttttatgataaaaacagtcatacgatacccttacgtattgctagatacttagacgatgtgttgtc
catcaataatccaaaattcgcggattacctgggcattatctatccttcggagcttgaagtcaaagaaaccacagagacaa
ataattcaacatcctatttggacataatgttgtcccacgacactgatggtcacatgaacaccttactctatgacgaacgt
gacgacttcagattcagcatcacaaactttcgttttctgagtagcaacatcccttcatcgcctgcttatggcgtgttcat
atctcagatgatacgctatgccagagcaaggataggctttagcttgtgtcatgttgccgccagcgtaatagttaatgtac
attttgatagaagacgtgttttagcagtcggagtatcatcagcaggtggcggagtgggtaccatggttttgcctttcttg
gttaactttctaattgagacgtatggctggcaaggaactttcatgcttctgtccgggatgggtttacaaggagtgtattg
tagttggatatttggactttccgtcgaaaaacagattccatcgaaagggaaaagatacgtagcttctgagttcaacttca
tttacagatacatagacgatgtgttgtccatcaataatccaaaattcacggattacctgagcagtatatatccttcggag
cttgaagtcaaagaaactacagagacaaataactcaacatcctatttggacaaaatgttgttctacgacactgatgatca
cttgaacacctcactctatgacaaacatgacgactgcaatttcagcattaaaaactttccttttctgagtagcaacattc
cttcatcgcctgcttatgtcggagtagcatcagcaggtggcggagtgggaaccatggttttgcctttcttatttaccttt
ctaattgagacgtatggctggcaaggaactttcatgcttctatccgggatgggtttacaaggagtgtactgtagttggat
atttggactttccgtcgaaaaacagattccatcgaaagatatagagaaaacaacttcagctaaatcggatatagatttga
aagatttagatgcttttacaaatacagaaagtatattgcaaaagacaaaggcaatcctatcttctaggaagtacattcta
ttcaacatatcggggatctgtgtttcattggcatattttgttccatatttgatggtaccagatattgctagggaacaggg
gatttccaaagacagcattgccctcatggtcactttatcgggactttcaagattgtttggcctgtatcagtcggtcatcg
ctgtagatataattggaaaggataatttaggattagcattcggatacttgacgtttctagatggaatcgccattgtactg
ggacctcccttggcagggtacctgtatgatttgaccggcgattaccagttgacattccccagctgcggtatcttgtttgg
tattggagggatcctgagtatagcagcacgtcctacaccagtagtcgtattgaataacctggaggtagtcatcgaggcat
tggtcaagaaaagtgccgacttttccagcagacctcgatttttcacaggtgaacttttctcacaaaacggaaaaggtatc
gttttcggtccttacagcgcaacatggaaattccataagaaagtggccgggaaggctctcaggtacggttgctttagagc
agatacgcgttttctaaaggtgtgtcacgatttctcacggcgagctaaggggtgtgttagccgtttcgtcacgttcaatc
acggaacgtcctggcttgttacgatttatttcgaattctactacggcctggcatggtacgcacagtcacacaagaggtgt
gatctaaatgatcctgatgttgagagactattgaaaatcgacacagaagttgttgagacttttggaaatggacttctaga
ggaccttgtaccagccatgacatacgtgtacaagacacaacgatgtaagagggttgagagcttgctttttgaagcactta
gctttttgaagaaggaactaaatcaacacgaagaaacttttgacccgaataacataagggactacacagacagtctgctg
tttgccagggaggaagccgaagacaaaccggaagaagcatcaaagctgacagaggtgtacatcgtgcaaatcctaaatga
tatattcttcggaaagaaacgtcatcctaaagccaccgaccgacctaacttgtgttttactgaggcttgtataatggaaa
ccatgagaatgggatctgtggtgggaataggtgtacctcacgccacaatatgtgatactaatgttggtggatatgacgta
caaaaggacaccatggtttttatcaaccactgggcattacataacgactctagctactggaaagatgtggagaagtttga
tctgtatcgttacttgacaaaagagggtaaaatggacatgaaaccggagaactggatgcctttctctgcagggagaaggg
tgtgtctcggggagcctgtagctagaacagaattgctgctcattgcctctaatctcttgcagaactttcgctttaaagct
ccacctggtgtaacccatgtaccgggaatgagatgtcccactcaagggacggaacttccagctttttacaaagttgttgt
tgaacgccgcacacaatcatag

Protein
Protein IDpfu_aug2.0_1430.1_01626.t1
Definition-
>pfu_aug2.0_1430.1_01626.t1
MHMTPLYAFADVTTDNYGSRSMLRSLGVVVSPNNQYLSVAIRNSKEYFEHAQNLIVRLRWSASDKSAVEVAASCRGVLFL
AARGYFYDKNSHTIPLRIARYLDDVLSINNPKFADYLGIIYPSELEVKETTETNNSTSYLDIMLSHDTDGHMNTLLYDER
DDFRFSITNFRFLSSNIPSSPAYGVFISQMIRYARARIGFSLCHVAASVIVNVHFDRRRVLAVGVSSAGGGVGTMVLPFL
VNFLIETYGWQGTFMLLSGMGLQGVYCSWIFGLSVEKQIPSKGKRYVASEFNFIYRYIDDVLSINNPKFTDYLSSIYPSE
LEVKETTETNNSTSYLDKMLFYDTDDHLNTSLYDKHDDCNFSIKNFPFLSSNIPSSPAYVGVASAGGGVGTMVLPFLFTF
LIETYGWQGTFMLLSGMGLQGVYCSWIFGLSVEKQIPSKDIEKTTSAKSDIDLKDLDAFTNTESILQKTKAILSSRKYIL
FNISGICVSLAYFVPYLMVPDIAREQGISKDSIALMVTLSGLSRLFGLYQSVIAVDIIGKDNLGLAFGYLTFLDGIAIVL
GPPLAGYLYDLTGDYQLTFPSCGILFGIGGILSIAARPTPVVVLNNLEVVIEALVKKSADFSSRPRFFTGELFSQNGKGI
VFGPYSATWKFHKKVAGKALRYGCFRADTRFLKVCHDFSRRAKGCVSRFVTFNHGTSWLVTIYFEFYYGLAWYAQSHKRC
DLNDPDVERLLKIDTEVVETFGNGLLEDLVPAMTYVYKTQRCKRVESLLFEALSFLKKELNQHEETFDPNNIRDYTDSLL
FAREEAEDKPEEASKLTEVYIVQILNDIFFGKKRHPKATDRPNLCFTEACIMETMRMGSVVGIGVPHATICDTNVGGYDV
QKDTMVFINHWALHNDSSYWKDVEKFDLYRYLTKEGKMDMKPENWMPFSAGRRVCLGEPVARTELLLIASNLLQNFRFKA
PPGVTHVPGMRCPTQGTELPAFYKVVVERRTQS

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