Gene
| Gene Model ID | pfu_aug2.0_1433.1_11660 |
|---|---|
| Locus | scaffold1433.1 : 27076 ... 42355 : - |
| To GenomeBrowser | scaffold1433.1:27076..42355 |
| Genes list of scaffold | scaffold1433.1 |
| Synonym | pfu_aug1.0_327.1_50803 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1433.1_11660.t1 | 1 | 1 | Beta-lactamase | 47 | 300 | 1.4e-34 | 119.6 | 1.1e-38 | 1.7e-34 | 119.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1433.1_11660.t1 | gi|676434827|ref|XP_009047356.1| | hypothetical protein LOTGIDRAFT_230584 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1433.1_11660.t1 | gi|676486813|ref|XP_009064095.1| | hypothetical protein LOTGIDRAFT_167965 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1433.1_11660.t1 | gi|676476609|ref|XP_009060848.1| | hypothetical protein LOTGIDRAFT_165565 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1433.1_11660.t1 | gi|260834328|ref|XP_002612163.1| | hypothetical protein BRAFLDRAFT_88902 [Branchiostoma floridae] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug2.0_1433.1_11660.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1433.1_11660.t1 atgatcgtcgtgaaaaatagtgatgcagttttagctcagagtgatgggaaaattaagatgctgaggtacagaaaacttcg tattaatatggttaaaatgagagaaaaagtattaaatttggaacaggaatctgaaattgatgatttcataggggagttaa taggatgtaagcgatttccaggattagggttatctatagtaaaaaatggagaaacattcgccaaaggttacggctacaga gatgtcaacagtaagaagccgtttgacgcggacacagtctcttgtggtgggtccactgggaaagcatttacagctgtact cctagcaattctcatgactgaaaaaaataaaaatggccacagagtaaattggaggtcaaacatacaggatatatcaagtg gagagatcagatttaaggatgaaacgaggacatctgaagtcacacttcttgaccttctgacccatagaattggtatggaa acagttgatctactattgatcactggatatcctgacaacattgctaatcgcaaatttatttctaaacgtttgagaaatat gaaaaccatagcgccatttcgggaggagttcatttataacaaccttatgtacatgacggcagggcatgtggcagaaattc tgggaggtgcgtcgtttgaggagctgataaggtcccggatatttaaaccactaaatatgactgctgcctcattcatggca gatcttgactttaatcaaaatgtggccagaccttacgacaaggaaaacgatactttgttggaatctgatacgtatctgta cagggtgcattctctttctcccgctggtactgtgtgtgctagtccacgtgattattcaaaatggctggtgtttttgctca acaacgcgacgactatggatggagtgagattgatagaggattcgttatggcgggacatgtggaaggggagacagtatatt ggagacgccgcggaaacgtcatatagcctgtataagccattcccttacttccggtcagcaagttcgtatgcaacggcttg gttccgttcgaactacagagagaggtga |
|
Protein
| Protein ID | pfu_aug2.0_1433.1_11660.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1433.1_11660.t1 MIVVKNSDAVLAQSDGKIKMLRYRKLRINMVKMREKVLNLEQESEIDDFIGELIGCKRFPGLGLSIVKNGETFAKGYGYR DVNSKKPFDADTVSCGGSTGKAFTAVLLAILMTEKNKNGHRVNWRSNIQDISSGEIRFKDETRTSEVTLLDLLTHRIGME TVDLLLITGYPDNIANRKFISKRLRNMKTIAPFREEFIYNNLMYMTAGHVAEILGGASFEELIRSRIFKPLNMTAASFMA DLDFNQNVARPYDKENDTLLESDTYLYRVHSLSPAGTVCASPRDYSKWLVFLLNNATTMDGVRLIEDSLWRDMWKGRQYI GDAAETSYSLYKPFPYFRSASSYATAWFRSNYRER |
|