Gene
Gene Model ID | pfu_aug2.0_1433.1_11660 |
---|---|
Locus | scaffold1433.1 : 27076 ... 42355 : - |
To GenomeBrowser | scaffold1433.1:27076..42355 |
Genes list of scaffold | scaffold1433.1 |
Synonym | pfu_aug1.0_327.1_50803 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1433.1_11660.t1 | 1 | 1 | Beta-lactamase | 47 | 300 | 1.4e-34 | 119.6 | 1.1e-38 | 1.7e-34 | 119.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1433.1_11660.t1 | gi|676434827|ref|XP_009047356.1| | hypothetical protein LOTGIDRAFT_230584 [Lottia gigantea] | 0.0 |
pfu_aug2.0_1433.1_11660.t1 | gi|676486813|ref|XP_009064095.1| | hypothetical protein LOTGIDRAFT_167965 [Lottia gigantea] | 0.0 |
pfu_aug2.0_1433.1_11660.t1 | gi|676476609|ref|XP_009060848.1| | hypothetical protein LOTGIDRAFT_165565 [Lottia gigantea] | 0.0 |
pfu_aug2.0_1433.1_11660.t1 | gi|260834328|ref|XP_002612163.1| | hypothetical protein BRAFLDRAFT_88902 [Branchiostoma floridae] | 1.4013e-45 |
Transcript
Transcript ID | pfu_aug2.0_1433.1_11660.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1433.1_11660.t1 atgatcgtcgtgaaaaatagtgatgcagttttagctcagagtgatgggaaaattaagatgctgaggtacagaaaacttcg tattaatatggttaaaatgagagaaaaagtattaaatttggaacaggaatctgaaattgatgatttcataggggagttaa taggatgtaagcgatttccaggattagggttatctatagtaaaaaatggagaaacattcgccaaaggttacggctacaga gatgtcaacagtaagaagccgtttgacgcggacacagtctcttgtggtgggtccactgggaaagcatttacagctgtact cctagcaattctcatgactgaaaaaaataaaaatggccacagagtaaattggaggtcaaacatacaggatatatcaagtg gagagatcagatttaaggatgaaacgaggacatctgaagtcacacttcttgaccttctgacccatagaattggtatggaa acagttgatctactattgatcactggatatcctgacaacattgctaatcgcaaatttatttctaaacgtttgagaaatat gaaaaccatagcgccatttcgggaggagttcatttataacaaccttatgtacatgacggcagggcatgtggcagaaattc tgggaggtgcgtcgtttgaggagctgataaggtcccggatatttaaaccactaaatatgactgctgcctcattcatggca gatcttgactttaatcaaaatgtggccagaccttacgacaaggaaaacgatactttgttggaatctgatacgtatctgta cagggtgcattctctttctcccgctggtactgtgtgtgctagtccacgtgattattcaaaatggctggtgtttttgctca acaacgcgacgactatggatggagtgagattgatagaggattcgttatggcgggacatgtggaaggggagacagtatatt ggagacgccgcggaaacgtcatatagcctgtataagccattcccttacttccggtcagcaagttcgtatgcaacggcttg gttccgttcgaactacagagagaggtga |
Protein
Protein ID | pfu_aug2.0_1433.1_11660.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1433.1_11660.t1 MIVVKNSDAVLAQSDGKIKMLRYRKLRINMVKMREKVLNLEQESEIDDFIGELIGCKRFPGLGLSIVKNGETFAKGYGYR DVNSKKPFDADTVSCGGSTGKAFTAVLLAILMTEKNKNGHRVNWRSNIQDISSGEIRFKDETRTSEVTLLDLLTHRIGME TVDLLLITGYPDNIANRKFISKRLRNMKTIAPFREEFIYNNLMYMTAGHVAEILGGASFEELIRSRIFKPLNMTAASFMA DLDFNQNVARPYDKENDTLLESDTYLYRVHSLSPAGTVCASPRDYSKWLVFLLNNATTMDGVRLIEDSLWRDMWKGRQYI GDAAETSYSLYKPFPYFRSASSYATAWFRSNYRER |