Gene
Gene Model ID | pfu_aug2.0_1433.1_11664 |
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Locus | scaffold1433.1 : 106066 ... 122927 : + |
To GenomeBrowser | scaffold1433.1:106066..122927 |
Genes list of scaffold | scaffold1433.1 |
Synonym | pfu_aug1.0_37476.1_05009 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1433.1_11664.t1 | 2 | 1 | HLH | 62 | 114 | 3.8e-10 | 39.3 | 2.1e-13 | 5.2e-10 | 38.8 |
pfu_aug2.0_1433.1_11664.t1 | 2 | 2 | HLH | 135 | 149 | 3.8e-10 | 39.3 | 0.98 | 2400.0 | -1.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1433.1_11664.t1 | gi|676461374|ref|XP_009055923.1| | hypothetical protein LOTGIDRAFT_161770 [Lottia gigantea] | 7.0e-38 |
pfu_aug2.0_1433.1_11664.t1 | gi|704567543|ref|XP_010184403.1| | PREDICTED: carbohydrate-responsive element-binding protein, partial [Mesitornis unicolor] | 3.0e-37 |
pfu_aug2.0_1433.1_11664.t1 | gi|586458357|ref|XP_006859900.1| | PREDICTED: carbohydrate-responsive element-binding protein [Chrysochloris asiatica] | 1.0e-36 |
pfu_aug2.0_1433.1_11664.t1 | gi|557295108|ref|XP_006029971.1| | PREDICTED: carbohydrate-responsive element-binding protein [Alligator sinensis] | 1.0e-36 |
pfu_aug2.0_1433.1_11664.t1 | gi|564228834|ref|XP_006258864.1| | PREDICTED: carbohydrate-responsive element-binding protein [Alligator mississippiensis] | 2.0e-36 |
Transcript
Transcript ID | pfu_aug2.0_1433.1_11664.t1 |
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Definition | - |
>pfu_aug2.0_1433.1_11664.t1 atgaaaggcctagaagtaaatgtagatagtgaactgttggaaaatttacataattcacttcaacaattaaaggtacagaa aggtagaaggcacttcggtccttccacaaatgggtcaccaaaatcccccaaatcacctacagagaagaaatgtggacgtc cagctaatcccataccaagacacaagagggactcgcacatcaaagcagaacataggagaagagacaaaatacagaaaggt tttgaaacattgagaacattggttccagaattagaagatgctccagcaaaagagagcaaagccattatgctgaaaaaaac ggctgaacactgccggaaattaaagggggatagtaagactctgtctaaccaagaggcagcattgagaagtgaaatcacag ccctcaataaccaaatacaagtgctgcagctacagctacccgactctggattggatgaagtagagaagccagcagcagac attgacacgttgtatgaaagctatgtccagtcaaggatgaagaaaaactggaagttttggctgtttgattttctgatacg acccctgtttgagtccttcaagtcaatggtgacaacgaacacgtcagatgaatttgatcattctgtatccaaatgggtca aagaaaagatgtccctgccgcagttaaggagaggatttctggaggctatgaagacagtcagtcattccacctgtataatg gacaatcctaacggtctccaagaccaggccaaggagaagatcactgacgttaacgtccacatctcatatcttaaagacga ggatttcaaggctcagaatggctcatcagttgatccagtcaacataacggctacaaatggggtcagcgatcaagttcata tcaaggagtctcaggtagctttctcaccagtaggaaaagtagaggaatcttttccccttcaggtggacgatttctcggtg ttttcacaagctgatctcggtctcctcgatgattgtcgcatgaccctagcctacagtcccatcacaacttctgcttcaaa tgccatagtaaacaattttgatgtggagatggctgacagcttcctccatagtctcaatgtccccgaccttggcatggtgt ttgatggtaaccatgacaacatactaccaaatatatctgtcggagactctatcccatttggcaatgtgcctttaacggta cacaatgtcatttcctctactgaggttgtcccttcactgcaggcaaccaaccaaaatggaatgtctgtaaatacatctgt cacaaatgtagttgaatcgcaaatattccttgaaaatttatag |
Protein
Protein ID | pfu_aug2.0_1433.1_11664.t1 |
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Definition | - |
>pfu_aug2.0_1433.1_11664.t1 MKGLEVNVDSELLENLHNSLQQLKVQKGRRHFGPSTNGSPKSPKSPTEKKCGRPANPIPRHKRDSHIKAEHRRRDKIQKG FETLRTLVPELEDAPAKESKAIMLKKTAEHCRKLKGDSKTLSNQEAALRSEITALNNQIQVLQLQLPDSGLDEVEKPAAD IDTLYESYVQSRMKKNWKFWLFDFLIRPLFESFKSMVTTNTSDEFDHSVSKWVKEKMSLPQLRRGFLEAMKTVSHSTCIM DNPNGLQDQAKEKITDVNVHISYLKDEDFKAQNGSSVDPVNITATNGVSDQVHIKESQVAFSPVGKVEESFPLQVDDFSV FSQADLGLLDDCRMTLAYSPITTSASNAIVNNFDVEMADSFLHSLNVPDLGMVFDGNHDNILPNISVGDSIPFGNVPLTV HNVISSTEVVPSLQATNQNGMSVNTSVTNVVESQIFLENL |