Gene
Gene Model ID | pfu_aug2.0_1433.1_11666 |
---|---|
Locus | scaffold1433.1 : 149956 ... 158528 : + |
To GenomeBrowser | scaffold1433.1:149956..158528 |
Genes list of scaffold | scaffold1433.1 |
Synonym | NA |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
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ddb1- and cul4-associated factor 6 | GO:0005654 GO:0005737 GO:0005925 GO:0030374 GO:0045944 GO:0080008 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1433.1_11666.t1 | 2 | 1 | WD40 | 27 | 58 | 1.5e-11 | 43.7 | 9.5e-10 | 7.0e-06 | 25.7 |
pfu_aug2.0_1433.1_11666.t1 | 2 | 2 | WD40 | 68 | 104 | 1.5e-11 | 43.7 | 3.0e-07 | 0.0022 | 17.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1433.1_11666.t1 | gi|524881634|ref|XP_005097467.1| | PREDICTED: DDB1- and CUL4-associated factor 6-like isoform X2 [Aplysia californica] | 0.0 |
pfu_aug2.0_1433.1_11666.t1 | gi|524881632|ref|XP_005097466.1| | PREDICTED: DDB1- and CUL4-associated factor 6-like isoform X1 [Aplysia californica] | 0.0 |
pfu_aug2.0_1433.1_11666.t1 | gi|593766365|ref|XP_007121701.1| | PREDICTED: DDB1- and CUL4-associated factor 6-like, partial [Physeter catodon] | 5.04467e-44 |
pfu_aug2.0_1433.1_11666.t1 | gi|562835598|ref|XP_006147110.1| | PREDICTED: DDB1- and CUL4-associated factor 6 [Tupaia chinensis] | 2.00386e-43 |
pfu_aug2.0_1433.1_11666.t1 | gi|677991258|ref|XP_009075363.1| | PREDICTED: DDB1- and CUL4-associated factor 6, partial [Acanthisitta chloris] | 2.99878e-43 |
Transcript
Transcript ID | pfu_aug2.0_1433.1_11666.t1 |
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Definition | - |
>pfu_aug2.0_1433.1_11666.t1 atgtatcaaagatatgataattactacaatgatatttgtattgtagggaacattgactatgtacagagactaaagctgga ctacaagttagagacccatacaggatgtgtgaacacgatatgctggaacacgactggtcagaacatactgtctggttcag acgatcaacatcttatcatctctgatccatttaaacgcaagaagattgtaactattagatcaggacatagggctaacata ttcagtgccaagtatatgcctttctccagtgacaaacatatcgtgagttgctctggagatgggaagatattctttacaga catagagagagaggatacttatggggctcatctatttgactgtcattttggaacaacatatgag |
Protein
Protein ID | pfu_aug2.0_1433.1_11666.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1433.1_11666.t1 MYQRYDNYYNDICIVGNIDYVQRLKLDYKLETHTGCVNTICWNTTGQNILSGSDDQHLIISDPFKRKKIVTIRSGHRANI FSAKYMPFSSDKHIVSCSGDGKIFFTDIEREDTYGAHLFDCHFGTTYE |