Gene
| Gene Model ID | pfu_aug2.0_1434.1_15037 |
|---|---|
| Locus | scaffold1434.1 : 1 ... 2665 : - |
| To GenomeBrowser | scaffold1434.1:1..2665 |
| Genes list of scaffold | scaffold1434.1 |
| Synonym | pfu_aug1.0_471.1_58134 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1434.1_15037.t1 | 2 | 1 | rve | 203 | 256 | 3.9e-08 | 33.4 | 3.1e-07 | 0.0023 | 18.0 |
| pfu_aug2.0_1434.1_15037.t1 | 2 | 2 | rve | 262 | 278 | 3.9e-08 | 33.4 | 8.0e-06 | 0.059 | 13.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1434.1_15037.t1 | gi|542230799|ref|XP_005453987.1| | PREDICTED: uncharacterized protein LOC102079436 [Oreochromis niloticus] | 8.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_1434.1_15037.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1434.1_15037.t1 atgtcaaaggcgaggataatcactgtgcagatctattatcccggattccacaccctaagacatcacaaaggtctaagaaa tccgacaataaacctgatatcgacgataggacttttgagattggagtcaaactcaaacgagcttaatcctagagactttg ccatttttcacgttgaagaccacaacgaggtgaccaaagctatctcagatttacctgaggagtttaacctgaaagaggag caagaaaaagaccaagacgttgtcaagctgaagaacagattaaggaaaggaacagctacaaaagctgaacagacgcacta ttttgaagacaaaaaagagggactattttactacctttcccaacctgactctgaggatccaaggctaagactgtatatac ctcaagagatggagacagtcgtcctcagacagcatcatgatcaactcggacacatggcagtagacaagacgtacgattcc attcgtctaaagtacttctttccaaatatgtacaagaaaatacacgcctacatcgaggaaagtgtcacatgtcagacaag gagctcaaggaaatcaaaaccgcctctcaaggaaaccgaggtacccccttatcctttcgcaaagattggactggatctat caggaccatatccgacgacattatctggcaataattacatagtttccttcatagacgtttattccgggtggccagaggca tttcccgtgccagacaagtcagcagatcgaattgtacatctgattttggaagaaatattcccaagtcaccaagcaaacgg aaaggttgagagattccacagaactcttcatgatgccatgtccaaacaaagtcaggaagacgttcgaacgttggacctgt acttgaatcagacactagctgccatttggtttcatgtaaacgagtcatcaaagtttactccttacttcctgctgtacaac agaaacgtagtacttcctttggacaccattttgaagccaagacgtagattatgaaacatcctacgtaaaacgaagtacgt aatcccaccggaacaaacagtcagtgatgacgaggagtgtgaacctcaagatatcgcaatacgacacagaatccaagaaa gggagggttcgtctgacgaagataacattccacttatggagcttcggagacgattaaggactcatgctatgccagagaca c |
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Protein
| Protein ID | pfu_aug2.0_1434.1_15037.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1434.1_15037.t1 MSKARIITVQIYYPGFHTLRHHKGLRNPTINLISTIGLLRLESNSNELNPRDFAIFHVEDHNEVTKAISDLPEEFNLKEE QEKDQDVVKLKNRLRKGTATKAEQTHYFEDKKEGLFYYLSQPDSEDPRLRLYIPQEMETVVLRQHHDQLGHMAVDKTYDS IRLKYFFPNMYKKIHAYIEESVTCQTRSSRKSKPPLKETEVPPYPFAKIGLDLSGPYPTTLSGNNYIVSFIDVYSGWPEA FPVPDKSADRIVHLILEEIFPSHQANGKVERFHRTLHDAMSKQSQEDVRTLDLYLNQTLAAIWFHVNESSKFTPYFLLYN RNVVLPLDTILKPRRRLXNILRKTKYVIPPEQTVSDDEECEPQDIAIRHRIQEREGSSDEDNIPLMELRRRLRTHAMPET |
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