Gene
| Gene Model ID | pfu_aug2.0_1434.1_15040 |
|---|---|
| Locus | scaffold1434.1 : 130906 ... 156834 : + |
| To GenomeBrowser | scaffold1434.1:130906..156834 |
| Genes list of scaffold | scaffold1434.1 |
| Synonym | pfu_aug1.0_9276.1_02737 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| helicase with zinc finger domain 2 | GO:0016070 GO:0034645 GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1434.1_15040.t1 | 3 | 1 | Viral_helicase1 | 254 | 348 | 1.9e-08 | 34.1 | 0.31 | 760.0 | -0.6 |
| pfu_aug2.0_1434.1_15040.t1 | 2 | 1 | RNB | 715 | 882 | 4.7e-40 | 137.8 | 4.0e-25 | 9.8e-22 | 77.6 |
| pfu_aug2.0_1434.1_15040.t1 | 3 | 1 | AAA_11 | 845 | 953 | 3.2e-23 | 82.5 | 0.95 | 2300.0 | -2.2 |
| pfu_aug2.0_1434.1_15040.t1 | 2 | 2 | RNB | 883 | 1042 | 4.7e-40 | 137.8 | 7.5e-20 | 1.9e-16 | 60.3 |
| pfu_aug2.0_1434.1_15040.t1 | 3 | 2 | Viral_helicase1 | 1509 | 1534 | 1.9e-08 | 34.1 | 0.64 | 1600.0 | -1.7 |
| pfu_aug2.0_1434.1_15040.t1 | 3 | 2 | AAA_11 | 1516 | 1540 | 3.2e-23 | 82.5 | 0.00085 | 2.1 | 7.8 |
| pfu_aug2.0_1434.1_15040.t1 | 3 | 3 | AAA_11 | 1550 | 1717 | 3.2e-23 | 82.5 | 6.7e-24 | 1.7e-20 | 73.6 |
| pfu_aug2.0_1434.1_15040.t1 | 3 | 3 | Viral_helicase1 | 1672 | 1856 | 1.9e-08 | 34.1 | 1.1e-10 | 2.7e-07 | 30.3 |
| pfu_aug2.0_1434.1_15040.t1 | 2 | 1 | AAA_12 | 1726 | 1750 | 1.8e-25 | 89.5 | 3.6e-05 | 0.089 | 12.1 |
| pfu_aug2.0_1434.1_15040.t1 | 2 | 2 | AAA_12 | 1756 | 1857 | 1.8e-25 | 89.5 | 2.1e-24 | 5.2e-21 | 74.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1434.1_15040.t1 | gi|551525975|ref|XP_005814465.1| | PREDICTED: helicase with zinc finger domain 2-like, partial [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_1434.1_15040.t1 | gi|119595663|gb|EAW75257.1| | peroxisomal proliferator-activated receptor A interacting complex 285, isoform CRA_c [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1434.1_15040.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1434.1_15040.t1 atgatcggcgacgagagaatagaagaaggagaattaggtggattattcacagacagcgatgactctgatgatgagagaca acttttaacagtcccacgtgcaattagcagtactgtttccttcctgacgcaaagagttacagaaggtgaacttggtggac tctttactgaaagtgaaaattcggactcagatcatgaacttgtacatactaaggaagaagacatacaagatcaaatggaa gaacctgaattacatagcttgaatattgattctttcgatataactacatgtactactaaagaagcaggattggagttttt gcaaaatgaggacgaaattcaaagcgatgacgcatcacgccaactcacggaatccgataaagtatctaaatcctgtttta atgagcgtagtcatagtgtgtttccggaaaccaaaaacatgaagaaacatgcgaaaaatgaagaatataatgaagttgat cccttccatcttccttcatgtgcatatgaaaacaaagatcgctttgatggccaatcacttgttgcagcaaaacaaatggc tgacggtagaatcaaagacaattttaacgtttctactatcagtaaaagtcaatgtgatagcatacacggaaatgcatcaa ccaaaacatgtacagatgaaacagatgatgcctccttaaaggagagtcttgaaggaagcattgaaaagaaggatacaacc ttcaagcaatttgataagctcgacacagatatacaaattcgcaaacactttccattgaccaaaagacatacgtctacaag gagaatccattcctctttagggtataagaacatctcgatgtgcagttctactgaagaagaggatattttttccgagacgg actcgagtgactcacctccagaatattctattctttactctagaaaatcttcgtcggttctctcaattgatgaagacaac acaggaaaaatatatggaagttccaatgcaagcgagagaacttatggaaagttacagatatactcacaaacgtttacaaa gacatctgcaggcagcaaacattctccaaaaaggagcaagtattctctacagaacgacgaagaaatctgggacagcagtt ccattgaagatagctcaagtcagagtgaaccatattgtgctttggacttcgatgacagctctgattctgacattgagaac aacaaatatgatttaggtaatattttgcaagattgtgatgaaaagatttggtacgactctgaattagagaggcggatgaa gaaggtagttgataagagaaatttcagaaatattttcggagcagatgacgagcaagagttttactcgcagtttcacgatg acctgcttgattcacgaggcgaatataaggactttgttctaaaagacattctggacaaaggtttggatttaaatgaaaat gcttggtcttactgtaaaaggctagatcgttcgatatctaaaaatgttaatgagatatcattcagcaggagcgataaatt aacattcgaaggaattgcttacatggaagacgagaataatgccaaagtggaatgtaagccttatggggaaatagtattta tcagtgggtgctcaaaaacacatcattgtttctctggagatactgtacttggaagattcatcggctcaaaacaaggaaga aaatatggtgagataatcaagatactagagacatcacgatttcggaatgtaaagcatcctgtgatgttgtgtactgtaga taaatttagtcatgcgatgatacctctatgcaaatcagttccaaaaattcatgttctacagaaacgagttcaaacacaga catcgtatctgtcttccagttctgttgatatttacagatacgattccacgtcgggatacttgagatttcatggaactgaa agtctacatccaaacatcaggaaaagaaaagtttttatggtggttattattggatgggatgatgaaaagccgctgcctct aggtgctgtaatagatgtcattgatgtgcaggatataggaacttgtctgaaattaagtaaactgatgcataagataccaa actaccatgatgatcttgataatgaacaatatcccagtttgacaatagcagatgatgcaattgaaattttcacgattgat gagagaggaacagtgttaaaagatgatgggtttagcttgcaagaagaacaaagcgacaacaatggcattctgcatcaata taaattgggaattcatgtaacaaatgttgcaagtgttatttcaaaagatagtgacagaaacaacaaggctgaggaaagaa ttttatccttaaaccaaggaaaattcccaacacttcatttattgccaaggaagttttgcctagaagtttgtagtctaaat gaaagaatgaagcgcaatgcaatttccttgtttttaaatgtatcagaaatgagggatggcacttggcagatcaagaaggg gtccatgatttgtaagtcggtagtaaagtccgttaagggatatgaatacaaagatgtagataatatcctacaggcaacag aatctctagattctgaggaatttacaaaactcagagtgttacaaaaagtcgcagaagatttgagaaacaaacgtctgaga agaaataaaaatcaactctcagggcatgacattgttgaggaattcatgatttttgcaaatcatgggatcgcagaattcat tcttgaacatgaaatgacaaggagtaagatttatcgtcggtcgttgagggtgctgaatcagagaggcctttccaaagaat acggccaagaaatgtcaacttcgtcagccaacgatagtagtttaggcagtatggatagatcaaagagaattaacatatct ctgatcaaactaacgcttggcaaacactctgaagaccctccaacgattgacggatgtttcagcaaggagtacgatagtga ctcaaaaatgaaatcacatgccgaatatattgtagcaactagaaaacatacgacagaaacactacacgtgggtttaagac gtaacccatatacacacttcacctcaccgatgcgtcgatacgtggacattgtaacacaaagaatagttttatctataatc gacaaaagttgttttccatacagcagtcatgaactcaaagccatttgccagcgtgtgaataaaagacagcttgacttcat aagatatgaaagcaaagttatggatctttctttttccaatgaactgttaatgaaatctgaaatgagtctggccgaagtat tattcttcgatgttaagtctgccattacaatgagcgtaccatcaaaattcaagaatggaatagatacgatactggaaata ccctttacaaatttagatttgagtacagacccgaaggaatgtgagcttggaaaatataatgaaacccctgcatgtaaaat acaatggaagaaacgagtatattgcacatatcctacggaaaagttaaaaaaatctttcccgttcttccttaggaaagata actctgaaaaaaggtttaacatagtgccgtttaagcatgttgctctgttaccagcgtctcttgcttcaaaactgaattgt aacgagtcaaacctgtcaatagaaacaaaaatcaagttgataggtcaggtggaagcttggaagacatatgatataccgga cattcgatctgacgaagaagagggacttatctttatgcatcttgccagtgtatctttcaagatttttattggtcaaaagc ttgatgttgttctttcaacagaactgcatagagggacattgagaccgattccgagccttatatcgtttacaccaaacttc cagatttgcgttaagcatatgaaagaacctattcattacttgaccagctatccaacagagggaagaaaagaaacatacca aactgttgatcaatatactcatatttggggaaaaataattgacatggaagcaacatataatgctgtcaaagaaatggata atccaattatttgtggaatagatattaaattcaaaggccgccaaggtatcttcaccttggctgaggaattttgtgttttg cgagacatcgacattacaggggctggtcattccaagattggctcacattttgaagaggttaaaagcaaaagctatctttg catcagatgtcatattccagatgaaagtagtaatgagtgcttcgtatgggtcggacatgcatggatacaaagggtaaaga gagcgcatattagcgattgtcaggggaagagtagagcggtttatttgatatgctttacacttcatccagaaacatcagtt atatcggaagaagttatggaggatgaaagaattgtgagaggtgctaggattgaactactgatgaaatcaattgttgacag tcgaacagaatgctgtatcagaaatttgtcaaaagaaaacggcttagcaacaagcattgccttgggaaggcctccatcgc ctctagatatttcccgtgtaaaggcatgtgataaaatttgtgaaggcctttcgcacagcgtgattttaaatgatcagcaa acccaggcaatcaagcaggctttacgagtcccatttagtctaatccagggtccacctgttcaacaggaacgtcagtcgga ttcacttgcttcaatacgcattgtccgaatatatggaaaggctcacgaaacaaatgactaccctgttccaggaaaagctg aatcatcagggaaaagaggtcagagggacatggaatgcgacaactttcttaaggatcatggtgtcgtattgcaccatatc atcagggaacccgggaaaccatatagtaaggagcttaaagattttaaaaggaagtttggagatgaatttctggatgatat ttccgttgatgacgtcattcagtatgaaaaacttgtgcgattggccacaaaaatggaactgaaaagctatgacgtcatat tttgtactttaacaatggcggttgcgccaaacgtacacagcgcaactgaaggtaccgtacagcaaatcataatcgacgag gctggaatgtgcacagaacctttaagtatggcacccattatcactcacaaaccaaaacaagtggttttgattggagatca tcaacagttacaaccaatagttaaaagtcgagaggccaaagattatggacttgtaatttcactttttgaaagacacgcaa aactggcgaaacagccccttacccttctgaaggaacagtatcgtatggtagtcgtttttaaagaactcctggaccacaat atctcttcaaaggatatcaatgtgatgtcacaatacaatgcacaattcaaagaactaaaaggaatcttgtcgaacacttg taaaaaggatttgaacgtgaatacagtcgttagcagccaaggtggagaatgggactacgttatttttagcaccgttcgat cccttcctagcttcctgatagaggacaaacctccagctacatggttcggaattaacctcggtttcataacggacagccat caggttaatgttgcccttacgagggctaagaaaggactcattataatagctatgatcttgttagtgtcatcttacagtaa gctattaccggtatacactacaattgtgccgtttggtaactggacgagtggaagtgttctgcacatgacaaatatggaca agaaccatatcccaatacagagaataaaatggaaaattcgaaaattattaaccgaaggcatacaaaataatgataaaacg ggaactaaagcaaacaaacaaacaattccatcatatgaacagaagcgaactcccaataaggaagtgagaccatgtgccca ggaagagacagcatcccccgcttgcaaacaacacccgtcaattcggcagacatatcagatccagttacttccactaagga agatacaatgttttgctgccagtgctgcaattgagtttgaacagttggacatctcctttcttccatag |
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Protein
| Protein ID | pfu_aug2.0_1434.1_15040.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1434.1_15040.t1 MIGDERIEEGELGGLFTDSDDSDDERQLLTVPRAISSTVSFLTQRVTEGELGGLFTESENSDSDHELVHTKEEDIQDQME EPELHSLNIDSFDITTCTTKEAGLEFLQNEDEIQSDDASRQLTESDKVSKSCFNERSHSVFPETKNMKKHAKNEEYNEVD PFHLPSCAYENKDRFDGQSLVAAKQMADGRIKDNFNVSTISKSQCDSIHGNASTKTCTDETDDASLKESLEGSIEKKDTT FKQFDKLDTDIQIRKHFPLTKRHTSTRRIHSSLGYKNISMCSSTEEEDIFSETDSSDSPPEYSILYSRKSSSVLSIDEDN TGKIYGSSNASERTYGKLQIYSQTFTKTSAGSKHSPKRSKYSLQNDEEIWDSSSIEDSSSQSEPYCALDFDDSSDSDIEN NKYDLGNILQDCDEKIWYDSELERRMKKVVDKRNFRNIFGADDEQEFYSQFHDDLLDSRGEYKDFVLKDILDKGLDLNEN AWSYCKRLDRSISKNVNEISFSRSDKLTFEGIAYMEDENNAKVECKPYGEIVFISGCSKTHHCFSGDTVLGRFIGSKQGR KYGEIIKILETSRFRNVKHPVMLCTVDKFSHAMIPLCKSVPKIHVLQKRVQTQTSYLSSSSVDIYRYDSTSGYLRFHGTE SLHPNIRKRKVFMVVIIGWDDEKPLPLGAVIDVIDVQDIGTCLKLSKLMHKIPNYHDDLDNEQYPSLTIADDAIEIFTID ERGTVLKDDGFSLQEEQSDNNGILHQYKLGIHVTNVASVISKDSDRNNKAEERILSLNQGKFPTLHLLPRKFCLEVCSLN ERMKRNAISLFLNVSEMRDGTWQIKKGSMICKSVVKSVKGYEYKDVDNILQATESLDSEEFTKLRVLQKVAEDLRNKRLR RNKNQLSGHDIVEEFMIFANHGIAEFILEHEMTRSKIYRRSLRVLNQRGLSKEYGQEMSTSSANDSSLGSMDRSKRINIS LIKLTLGKHSEDPPTIDGCFSKEYDSDSKMKSHAEYIVATRKHTTETLHVGLRRNPYTHFTSPMRRYVDIVTQRIVLSII DKSCFPYSSHELKAICQRVNKRQLDFIRYESKVMDLSFSNELLMKSEMSLAEVLFFDVKSAITMSVPSKFKNGIDTILEI PFTNLDLSTDPKECELGKYNETPACKIQWKKRVYCTYPTEKLKKSFPFFLRKDNSEKRFNIVPFKHVALLPASLASKLNC NESNLSIETKIKLIGQVEAWKTYDIPDIRSDEEEGLIFMHLASVSFKIFIGQKLDVVLSTELHRGTLRPIPSLISFTPNF QICVKHMKEPIHYLTSYPTEGRKETYQTVDQYTHIWGKIIDMEATYNAVKEMDNPIICGIDIKFKGRQGIFTLAEEFCVL RDIDITGAGHSKIGSHFEEVKSKSYLCIRCHIPDESSNECFVWVGHAWIQRVKRAHISDCQGKSRAVYLICFTLHPETSV ISEEVMEDERIVRGARIELLMKSIVDSRTECCIRNLSKENGLATSIALGRPPSPLDISRVKACDKICEGLSHSVILNDQQ TQAIKQALRVPFSLIQGPPVQQERQSDSLASIRIVRIYGKAHETNDYPVPGKAESSGKRGQRDMECDNFLKDHGVVLHHI IREPGKPYSKELKDFKRKFGDEFLDDISVDDVIQYEKLVRLATKMELKSYDVIFCTLTMAVAPNVHSATEGTVQQIIIDE AGMCTEPLSMAPIITHKPKQVVLIGDHQQLQPIVKSREAKDYGLVISLFERHAKLAKQPLTLLKEQYRMVVVFKELLDHN ISSKDINVMSQYNAQFKELKGILSNTCKKDLNVNTVVSSQGGEWDYVIFSTVRSLPSFLIEDKPPATWFGINLGFITDSH QVNVALTRAKKGLIIIAMILLVSSYSKLLPVYTTIVPFGNWTSGSVLHMTNMDKNHIPIQRIKWKIRKLLTEGIQNNDKT GTKANKQTIPSYEQKRTPNKEVRPCAQEETASPACKQHPSIRQTYQIQLLPLRKIQCFAASAAIEFEQLDISFLP |
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