Gene
| Gene Model ID | pfu_aug2.0_1436.1_21618 |
|---|---|
| Locus | scaffold1436.1 : 94126 ... 97738 : + |
| To GenomeBrowser | scaffold1436.1:94126..97738 |
| Genes list of scaffold | scaffold1436.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| intraflagellar transport protein 20 homolog | GO:0001750 GO:0001822 GO:0002046 GO:0005794 GO:0005814 GO:0005930 GO:0007224 GO:0008542 GO:0030992 GO:0031514 GO:0032391 GO:0034067 GO:0035845 GO:0036064 GO:0036372 GO:0042073 GO:0044292 GO:0051642 GO:0055007 GO:0060828 GO:0061351 GO:0061512 GO:0070062 GO:0097546 GO:1902017 GO:2000785 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1436.1_21618.t1 | 1 | 1 | IFT20 | 9 | 128 | 0.0 | 167.9 | 0.0 | 0.0 | 167.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1436.1_21618.t1 | gi|676454869|ref|XP_009053821.1| | hypothetical protein LOTGIDRAFT_188589 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1436.1_21618.t1 | gi|524916041|ref|XP_005112803.1| | PREDICTED: intraflagellar transport protein 20 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_1436.1_21618.t1 | gi|291220757|ref|XP_002730389.1| | PREDICTED: intraflagellar transport protein 20 homolog [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1436.1_21618.t1 | gi|260793763|ref|XP_002591880.1| | hypothetical protein BRAFLDRAFT_89396 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1436.1_21618.t1 | gi|156374441|ref|XP_001629815.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1436.1_21618.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1436.1_21618.t1 atggcagacgaagcgcttgctcgggcaggactacattttgatgaattaaataaaataagagttcttgagccagatgtagc acagcagactgttgagcttaaagaagaatgcaaagattttgttgataaaatagcagatttccagaaaattgtaggttcgt tcattgatgtagtggacaatgtctcaaaagaggttgagaaggagaagatgaaggcaataggatccagaaatttattaaaa tcaatagccaagcaacgtgaagcccagcaacaacagctacaggcccttataactgagaaaaaaatgcagctagaaaggtt acgtattcagtatgatgcattacagaaagaagaaagtgaacagaatgaattcatagaacagtttattcttcaaaaataa |
|
Protein
| Protein ID | pfu_aug2.0_1436.1_21618.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1436.1_21618.t1 MADEALARAGLHFDELNKIRVLEPDVAQQTVELKEECKDFVDKIADFQKIVGSFIDVVDNVSKEVEKEKMKAIGSRNLLK SIAKQREAQQQQLQALITEKKMQLERLRIQYDALQKEESEQNEFIEQFILQK |
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