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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1436.1_21619
Locus scaffold1436.1 : 99856 ... 109345 : -
To GenomeBrowser scaffold1436.1:99856..109345
Genes list of scaffold scaffold1436.1
Synonym pfu_aug1.0_809.1_58256

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1436.1_21619.t1 1 1 Mnd1 1 178 0.0 165.3 0.0 0.0 160.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1436.1_21619.t1 gi|676448892|ref|XP_009051877.1| hypothetical protein LOTGIDRAFT_214096 [Lottia gigantea] 0.0
pfu_aug2.0_1436.1_21619.t1 gi|585671526|ref|XP_006818066.1| PREDICTED: meiotic nuclear division protein 1 homolog [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_1436.1_21619.t1 gi|697489226|ref|XP_009675404.1| PREDICTED: meiotic nuclear division protein 1 homolog [Struthio camelus australis] 0.0
pfu_aug2.0_1436.1_21619.t1 gi|719745347|ref|XP_010211058.1| PREDICTED: meiotic nuclear division protein 1 homolog isoform X2 [Tinamus guttatus] 0.0
pfu_aug2.0_1436.1_21619.t1 gi|663260913|ref|XP_008492014.1| PREDICTED: meiotic nuclear division protein 1 homolog [Calypte anna] 0.0

Transcript
Transcript IDpfu_aug2.0_1436.1_21619.t1
Definition-
>pfu_aug2.0_1436.1_21619.t1
atgatggaattcttcttcgaaaagaaagactttttccagctcaaagagttagagcgattatgtcaaaaggagaagggtat
aacgtcaatgtccgtcaaagagatcctgaccagtttagttgacgatggcatggtggatacagacaagataggcacgtctg
tgtatttctgggcattccctagtaaagccagtcaaaatagaaaacgcaagatagatgacctgaaaggcaggatacaagat
cttgattcccgtaaaaagatgttgacagatgctgtgaccaaagccaaaattgggaaagaagacacgaatgagagaacaga
attactatcacaacttgaagagaagagagccgtggtatctagattatttatcataaaaaaggagaatgtgatgcagtgta
aggatatctttgcgattttcttgtattcttttaaaaacaatgtgttttccatcaagtcctggattaaaaacaagttcagc
tttgaagacaatgttattgataaacagtttggtattcctgatgactttgattatattgattga

Protein
Protein IDpfu_aug2.0_1436.1_21619.t1
Definition-
>pfu_aug2.0_1436.1_21619.t1
MMEFFFEKKDFFQLKELERLCQKEKGITSMSVKEILTSLVDDGMVDTDKIGTSVYFWAFPSKASQNRKRKIDDLKGRIQD
LDSRKKMLTDAVTKAKIGKEDTNERTELLSQLEEKRAVVSRLFIIKKENVMQCKDIFAIFLYSFKNNVFSIKSWIKNKFS
FEDNVIDKQFGIPDDFDYID

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