Gene
| Gene Model ID | pfu_aug2.0_1436.1_21620 |
|---|---|
| Locus | scaffold1436.1 : 135496 ... 148113 : + |
| To GenomeBrowser | scaffold1436.1:135496..148113 |
| Genes list of scaffold | scaffold1436.1 |
| Synonym | pfu_aug1.0_18765.1_03938 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| importin subunit alpha-1-like | GO:0015031 GO:0044424 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1436.1_21620.t1 | 6 | 1 | Arm | 73 | 103 | 1.6e-08 | 34.0 | 3.1e-07 | 0.0015 | 18.2 |
| pfu_aug2.0_1436.1_21620.t1 | 6 | 2 | Arm | 132 | 146 | 1.6e-08 | 34.0 | 0.014 | 67.0 | 3.5 |
| pfu_aug2.0_1436.1_21620.t1 | 6 | 3 | Arm | 158 | 188 | 1.6e-08 | 34.0 | 0.0003 | 1.5 | 8.7 |
| pfu_aug2.0_1436.1_21620.t1 | 6 | 4 | Arm | 213 | 228 | 1.6e-08 | 34.0 | 0.17 | 860.0 | 0.0 |
| pfu_aug2.0_1436.1_21620.t1 | 6 | 5 | Arm | 235 | 257 | 1.6e-08 | 34.0 | 0.018 | 88.0 | 3.1 |
| pfu_aug2.0_1436.1_21620.t1 | 6 | 6 | Arm | 294 | 305 | 1.6e-08 | 34.0 | 1.6 | 8100.0 | -3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1436.1_21620.t1 | gi|676382897|ref|XP_009034727.1| | hypothetical protein AURANDRAFT_1526, partial [Aureococcus anophagefferens] | 5.0e-23 |
| pfu_aug2.0_1436.1_21620.t1 | gi|585671522|ref|XP_006818065.1| | PREDICTED: importin subunit alpha-1-like [Saccoglossus kowalevskii] | 6.0e-23 |
| pfu_aug2.0_1436.1_21620.t1 | gi|632967853|ref|XP_007900210.1| | PREDICTED: transmembrane and coiled-coil domain-containing protein 6 [Callorhinchus milii] | 7.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_1436.1_21620.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1436.1_21620.t1 atgacaattcgaaaagaaaagaaagagaaactgctgagtaccaagagatatcggacgaggtctggggattttgctgacga tgaaataagtgaagaagaggtgattgtagctgcaaatggattgaagaaaaatggtccacataggaaggaaaacctgatgt cattacgacgagctttctctctgggaacggcttatattgatgccttcttcagtgtagagaatgccctgggtgcattagtt gggctatatacaggaaatgatgtggatatacaaatagaggcagcttggtgcatcacaaatatctctgcaggcacccagga ccatgctatggcggtaaccaaacaggcagcaccatatatggtcacctatctcagtagctccattcctcagctacaggtcg ttacaccattgttacgttgccttggtaacatatgcagtggtcccgatgataatacaatgaaggcgtgtgagaactctgat ttactgccgtccctggcagtctacctgtcctctgacctcagacatgctagaaaggaaacgttatgggtgttatcaaacat gacaggagatctaagtgtgtgtaaggctgtcacttatggacctcatctatcactcatccttcaacaagtacctgctgcct ttgatgttaaaatagaggccttgtatctgctgtgtaacatagcttgtcatggagaggacctttgtaaccacatggtggag aatggtgtcctagaaacggtggtgccatgtctgaaattatctgatgtagaaatactgaatctgagtttggctctgtgtga gatgtgtctcagaatgtccactggggcgaagcagcattttgacaaacagtgtgagggtatagcgagactggaggctctgg agtaccataataacgatactctgagaaagcaggccatacatgtactggagacgtactttgagaaagaagaggaaactggc aaggaatga |
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Protein
| Protein ID | pfu_aug2.0_1436.1_21620.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1436.1_21620.t1 MTIRKEKKEKLLSTKRYRTRSGDFADDEISEEEVIVAANGLKKNGPHRKENLMSLRRAFSLGTAYIDAFFSVENALGALV GLYTGNDVDIQIEAAWCITNISAGTQDHAMAVTKQAAPYMVTYLSSSIPQLQVVTPLLRCLGNICSGPDDNTMKACENSD LLPSLAVYLSSDLRHARKETLWVLSNMTGDLSVCKAVTYGPHLSLILQQVPAAFDVKIEALYLLCNIACHGEDLCNHMVE NGVLETVVPCLKLSDVEILNLSLALCEMCLRMSTGAKQHFDKQCEGIARLEALEYHNNDTLRKQAIHVLETYFEKEEETG KE |
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