Gene
Gene Model ID | pfu_aug2.0_1437.1_24920 |
---|---|
Locus | scaffold1437.1 : 88796 ... 124650 : + |
To GenomeBrowser | scaffold1437.1:88796..124650 |
Genes list of scaffold | scaffold1437.1 |
Synonym | pfu_aug1.0_33075.1_26626 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1437.1_24920.t1 | 2 | 1 | 7tm_1 | 53 | 129 | 1.99965e-42 | 145.1 | 3.7e-20 | 1.1e-16 | 60.7 |
pfu_aug2.0_1437.1_24920.t1 | 2 | 2 | 7tm_1 | 133 | 249 | 1.99965e-42 | 145.1 | 5.3e-29 | 1.6e-25 | 89.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1437.1_24920.t1 | gi|260794625|ref|XP_002592309.1| | hypothetical protein BRAFLDRAFT_71046 [Branchiostoma floridae] | 5.99756e-43 |
pfu_aug2.0_1437.1_24920.t1 | gi|260797697|ref|XP_002593838.1| | hypothetical protein BRAFLDRAFT_214902 [Branchiostoma floridae] | 4.00001e-41 |
pfu_aug2.0_1437.1_24920.t1 | gi|115918018|ref|XP_787561.2| | PREDICTED: G-protein coupled receptor 54-like [Strongylocentrotus purpuratus] | 3.0e-40 |
Transcript
Transcript ID | pfu_aug2.0_1437.1_24920.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1437.1_24920.t1 atgatcatgacgtcaacattttcctaccttgtgaattctacgtattcctcgaacatttcttacaacgtaagcgaagaacc ggtggcagcggagggcggtttggacagtatcattgttcccattgtgtttgccttgatatgtatagtaggcgcagttggaa atggtgtcgtgatttacattttattccgttacggagaacgatcagtaacgaatgtgtacattatcaatcttgccttagcc gatttagcttttcttctcatcgtagtgccgataacagcagtaacgtttgcaacgccgtactggggttttggagacggaat gtgcaagtttttcctttacacaatctattccacgctgaatgccagtcgtctcaaactgaccgccataaagtccacgctgc atgccacttgtctcacattgaccgccatgacagctgaccgttaccaggctatcgtgtatcccatacagtcaatgaactgg cgatctacacgtgcttcaacatttgtctgtatcggtgtatggattgcttccttcctcttgtcgctccccttcgccctcta ccatgaggtacaatcccaaggaggaggtctgatctgcaccaccaactggccccaccctgagtgggacaagtggttccatc tgggcgtggtcctaactacgttcgttttcccgctaactgccatcgtcatctgctacgtccagatcctccatcacttgtgg cgtgggagcaaagtcaaaaggaatcagagaaatgtggtaagtatcagtaaaggaacaacctag |
Protein
Protein ID | pfu_aug2.0_1437.1_24920.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1437.1_24920.t1 MIMTSTFSYLVNSTYSSNISYNVSEEPVAAEGGLDSIIVPIVFALICIVGAVGNGVVIYILFRYGERSVTNVYIINLALA DLAFLLIVVPITAVTFATPYWGFGDGMCKFFLYTIYSTLNASRLKLTAIKSTLHATCLTLTAMTADRYQAIVYPIQSMNW RSTRASTFVCIGVWIASFLLSLPFALYHEVQSQGGGLICTTNWPHPEWDKWFHLGVVLTTFVFPLTAIVICYVQILHHLW RGSKVKRNQRNVVSISKGTT |