Gene
| Gene Model ID | pfu_aug2.0_1445.1_18333 |
|---|---|
| Locus | scaffold1445.1 : 2586 ... 10610 : + |
| To GenomeBrowser | scaffold1445.1:2586..10610 |
| Genes list of scaffold | scaffold1445.1 |
| Synonym | pfu_aug1.0_60.1_29049 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mannan endo- -beta-mannosidase-like | GO:0016798 GO:0044238 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1445.1_18333.t1 | 3 | 1 | Lectin_C | 7 | 115 | 2.1e-32 | 111.8 | 1.3e-19 | 3.9e-16 | 59.5 |
| pfu_aug2.0_1445.1_18333.t1 | 3 | 2 | Lectin_C | 146 | 256 | 2.1e-32 | 111.8 | 2.7e-19 | 8.1e-16 | 58.5 |
| pfu_aug2.0_1445.1_18333.t1 | 1 | 1 | Cellulase | 334 | 559 | 6.2e-08 | 32.1 | 4.6e-11 | 1.4e-07 | 31.0 |
| pfu_aug2.0_1445.1_18333.t1 | 3 | 3 | Lectin_C | 339 | 372 | 2.1e-32 | 111.8 | 0.8 | 2400.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1445.1_18333.t1 | gi|676463085|ref|XP_009056482.1| | hypothetical protein LOTGIDRAFT_216450 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1445.1_18333.t1 | gi|676463088|ref|XP_009056483.1| | hypothetical protein LOTGIDRAFT_162276 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1445.1_18333.t1 | gi|524901139|ref|XP_005106981.1| | PREDICTED: mannan endo-1,4-beta-mannosidase-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_1445.1_18333.t1 | gi|524886852|ref|XP_005100017.1| | PREDICTED: mannan endo-1,4-beta-mannosidase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1445.1_18333.t1 | gi|676492544|ref|XP_009065952.1| | hypothetical protein LOTGIDRAFT_204833 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1445.1_18333.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1445.1_18333.t1 atggagcttatacggcggaacatgacattccatgacgcaggaaattactgcgtctcactgagagctcgtttagtgtccat acattctaatgctgaaaatcaacaagtgtacgctctctgcaagaacgctggacagaattgttggataggtctggagagga gagggtcatctttcgtatgggtggacggcacacctgtcatatacagccattttatgaatggtgagccagataattggcat ggaatggagtcgtgtgggatgatgaaaatagacaataaataccatggttcatggtccgaccaggcctgcgaggaacctta tgataagacctattttgtctgcaaatacccctccagcagtaccaccatttccaccaccaccacaaagagcgtcacaacaa cggcaaaatcgaatcatcatttaatgttagttcaacaaaagatgacctttcacaacgctgagaagtattgtgtcagcatg ggaggccatattacgtccattcacagtgctgatgaacaagaacaagtctacgatctctgtagaaaggtgaatcagaattg ctggattggttttgagaacaagccctcgactggattcatgtggactgattcgtcacccgtgacatacattcacttccagc caggcgagcctgataactggaatggtgtagaatcctgtgttataatgaaggtgaacaatcaatacaacggtacatggtca gatcaagactgtgacgccgactatgacagatcttatttcgtctgtaagattcccaatggcgcagtggccccacaaaccac cactcctgttatacacactacaactcacgactctggggtatcaatcttgaccacactcccacacaatgtgcccaatgacc acaagcttcaaatatcaggaaacaattttgtattcggtggtaagaggatatttctatccggtatcaacaaggcatgggaa gcttatgcatacgactttggtcaggctcagtatcaatatcgtagacgagcttatcagaaagtatttcaggagatagaaca agctgggggaaattctgttcgaatatggattcacatggaaggagagacatcgccacagtttgactcatctggtcatgtga cgtcaactgatgagaaggggaccttaatcagtgacctgcggaccatgatacacgatgcacagcagcacaatctttttgtg ttcccttgcttgtggaacgctgctgtaaaacaaaactttcaccagcggcttgatgggttgataaaagacacaagcaagtt acaatcctacatcgaccacgcccttattccgatggtaaaggctctgaagaacgagacagccctagggggttgggacatta tgaacgagcctggaggagaaatgattcagaatgttttcagtagtgatccgtgtcaggatactagattcctcgacaactca ggggcaggttgggcggggcatctttacaaagctgcagagttccaaagatttgtaaactggcaagctgacgccattaagcg tacagatccagacgccctggtcacattaggggtatggagtggacggcctaatatggacaagtttggatggaggaatatct acaaagactcgtgcctaaaacatgttggcggtaggccaatgggtacgctttctttctaccaaattcacagttactcgtgg cagggcaaattctcatcggactctccattcctggtaaaagagaatttcacttttaagaacatttctaaatga |
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Protein
| Protein ID | pfu_aug2.0_1445.1_18333.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1445.1_18333.t1 MELIRRNMTFHDAGNYCVSLRARLVSIHSNAENQQVYALCKNAGQNCWIGLERRGSSFVWVDGTPVIYSHFMNGEPDNWH GMESCGMMKIDNKYHGSWSDQACEEPYDKTYFVCKYPSSSTTISTTTTKSVTTTAKSNHHLMLVQQKMTFHNAEKYCVSM GGHITSIHSADEQEQVYDLCRKVNQNCWIGFENKPSTGFMWTDSSPVTYIHFQPGEPDNWNGVESCVIMKVNNQYNGTWS DQDCDADYDRSYFVCKIPNGAVAPQTTTPVIHTTTHDSGVSILTTLPHNVPNDHKLQISGNNFVFGGKRIFLSGINKAWE AYAYDFGQAQYQYRRRAYQKVFQEIEQAGGNSVRIWIHMEGETSPQFDSSGHVTSTDEKGTLISDLRTMIHDAQQHNLFV FPCLWNAAVKQNFHQRLDGLIKDTSKLQSYIDHALIPMVKALKNETALGGWDIMNEPGGEMIQNVFSSDPCQDTRFLDNS GAGWAGHLYKAAEFQRFVNWQADAIKRTDPDALVTLGVWSGRPNMDKFGWRNIYKDSCLKHVGGRPMGTLSFYQIHSYSW QGKFSSDSPFLVKENFTFKNISK |
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