Gene
| Gene Model ID | pfu_aug2.0_1445.1_18334 |
|---|---|
| Locus | scaffold1445.1 : 27196 ... 45739 : + |
| To GenomeBrowser | scaffold1445.1:27196..45739 |
| Genes list of scaffold | scaffold1445.1 |
| Synonym | pfu_aug1.0_60.1_29053 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mannan endo- -beta-mannosidase-like | GO:0008152 GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1445.1_18334.t1 | 3 | 1 | Lectin_C | 197 | 305 | 9.9e-16 | 58.2 | 2.0e-19 | 9.9e-16 | 58.2 |
| pfu_aug2.0_1445.1_18334.t1 | 1 | 1 | Cellulase | 362 | 645 | 3.0e-10 | 39.7 | 1.2e-13 | 5.8e-10 | 38.8 |
| pfu_aug2.0_1445.1_18334.t1 | 3 | 2 | Lectin_C | 376 | 407 | 9.9e-16 | 58.2 | 0.65 | 3200.0 | -1.3 |
| pfu_aug2.0_1445.1_18334.t1 | 3 | 3 | Lectin_C | 628 | 652 | 9.9e-16 | 58.2 | 3.0 | 15000.0 | -3.7 |
Transcript
| Transcript ID | pfu_aug2.0_1445.1_18334.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1445.1_18334.t1 atgttaaacttcctggtcgacaccatttttgtggtgtttggaggaaaggtcgttggagcacggaggaaaggcaaactcat tggaggaaagatacatatagacgatgtgctgtcaagcaataatccaaaattcgcggattacctcagcagagtctatcctt cggagcttgaagtcaaagaaactacagagacaaataattcagcattctatctggacataacgttgtactacgacactgag ggtcgcatgaacacctcactctatgacaaacgtgacgacttcaatttcaacattacaaacttgccttttctcagtagcaa catcccttcatcaccagcttatggcgtattcatatctcatttgatacgcaatgccagaggaagtaccaaatatacaaatt ttgttctgagagctagacgtctttcagataagcctctcagccagggatactttatctatgaattacttgacgctcagagt tgtaagcagtaccttggtcacagaatgttggtctggagtgcagtagtccttctctcactatgtttctgccaaacaactct aggagcatcgtttcagctgatcaagagtctgaaaactttccatgcagcagaacagtattgtgtgtcccatggaggtcatc tagcatccattcacagcgctcaggagaatcaggcagtgtacagtctttgtcatgcagttggaaagaactgttggataggt tttgagaagcgtggttcatcctactcatggactgacggatcaacctcgtcatacaagaactttataagtggggagcctga caactggcatggattggagggttgcgctgtacttaaggtggacagtcgctatcacggacagtggtcagaccaggcttgtg atgcttcctacgaccactcctactttgtctgtaaactccagaacacaggaggtagtcagactggaaatgttcactcaacg cagagtcatggtagtcaatcaagtgcaagcaagctgagcatcagaggaaatcattttatgtacaacggacatcgtatttt cctgtcgggtataaataaggcgtgggagcagtatgcctatgattttggaaacaaccagttttccaatgtccgtagtaaat ataatcacgttcttcagcaaatacaacaatctggaggaaattcagtccgaatatgggtacatattgacggacaatcatca cccaagtttgatggttcgggacacgttacagccacagacaatagtgggactttgatcagcgacctacgaacattgctgca tgatgccaggagtcacaatgtctttgttttcctcaccctgtggaacggtgctgccaagtccaactctcacaacagactag acggtctgataaaagacacaaacaagctgcagtcttacctgaaccacgccctgatccccatggtcaaagctctcaaaaat gaacccgccctgggtggctgggatatcatgaacgaaccggaaggtgaaatgaaaccggatatatatagcagtgatccatg tcatgatacgagaattctacataattccggagcagggtgggagggaaaactttatacagcccaggaaattcaaagatttg tgaactggcaagcggatgccataaagcgaactgatccctcagccttagtaacggtcggagcatggagtgggagggtcaat acagatcattttggatatcataattactacaaggattcatgcttggttaaaagtggaggcaaacaaatgggtactctgtc gttttatcaagttcatagctatgcatggcaaggacatttcggcagtgactctccttttaagcacaagttttctgaccttg gcctgaacaaacctctggtaatcggagaataccgtgagaaggacggaggagggatgagtatcaaccagctgtacgactac gcctacaataacggatatatagactgtgctgtccatcaacaatccaaattcacggattaccttagaagaatctatccgtc ggtgcttgaagtcaaagaaactacagagacaaataattcagcatcctatttggacatattgctgccctatgacactgatg gtcacatgaacacctcactctatgacaaacgtgacgatttcagtttcagcatcacaaactttccttttctgagtagcaac atgccttcatcgcctgcttatggcgtgttcatatcccaattgatacgctatgtcagagcaagtagcaaatatacagattt tgttcagggagctaggcgtctttcagataagcttatcagtcagggatacgtttgtaatcgactaacatcgtcaccgagga agttctacggtcgatacggggaactcgtcatacactatgatgtcccattgtccagaatggaggataatattctgtcttag |
|
Protein
| Protein ID | pfu_aug2.0_1445.1_18334.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1445.1_18334.t1 MLNFLVDTIFVVFGGKVVGARRKGKLIGGKIHIDDVLSSNNPKFADYLSRVYPSELEVKETTETNNSAFYLDITLYYDTE GRMNTSLYDKRDDFNFNITNLPFLSSNIPSSPAYGVFISHLIRNARGSTKYTNFVLRARRLSDKPLSQGYFIYELLDAQS CKQYLGHRMLVWSAVVLLSLCFCQTTLGASFQLIKSLKTFHAAEQYCVSHGGHLASIHSAQENQAVYSLCHAVGKNCWIG FEKRGSSYSWTDGSTSSYKNFISGEPDNWHGLEGCAVLKVDSRYHGQWSDQACDASYDHSYFVCKLQNTGGSQTGNVHST QSHGSQSSASKLSIRGNHFMYNGHRIFLSGINKAWEQYAYDFGNNQFSNVRSKYNHVLQQIQQSGGNSVRIWVHIDGQSS PKFDGSGHVTATDNSGTLISDLRTLLHDARSHNVFVFLTLWNGAAKSNSHNRLDGLIKDTNKLQSYLNHALIPMVKALKN EPALGGWDIMNEPEGEMKPDIYSSDPCHDTRILHNSGAGWEGKLYTAQEIQRFVNWQADAIKRTDPSALVTVGAWSGRVN TDHFGYHNYYKDSCLVKSGGKQMGTLSFYQVHSYAWQGHFGSDSPFKHKFSDLGLNKPLVIGEYREKDGGGMSINQLYDY AYNNGYIDCAVHQQSKFTDYLRRIYPSVLEVKETTETNNSASYLDILLPYDTDGHMNTSLYDKRDDFSFSITNFPFLSSN MPSSPAYGVFISQLIRYVRASSKYTDFVQGARRLSDKLISQGYVCNRLTSSPRKFYGRYGELVIHYDVPLSRMEDNILS |
|