Gene
| Gene Model ID | pfu_aug2.0_1445.1_18337 |
|---|---|
| Locus | scaffold1445.1 : 116327 ... 118945 : - |
| To GenomeBrowser | scaffold1445.1:116327..118945 |
| Genes list of scaffold | scaffold1445.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1445.1_18337.t1 | 2 | 1 | HHH_8 | 109 | 177 | 6.6e-09 | 35.8 | 7.1e-12 | 2.6e-08 | 33.9 |
| pfu_aug2.0_1445.1_18337.t1 | 2 | 2 | HHH_8 | 180 | 212 | 6.6e-09 | 35.8 | 0.94 | 3500.0 | -1.8 |
| pfu_aug2.0_1445.1_18337.t1 | 1 | 1 | DNA_pol_lambd_f | 197 | 246 | 1.2e-09 | 37.5 | 7.4e-13 | 2.8e-09 | 36.3 |
| pfu_aug2.0_1445.1_18337.t1 | 1 | 1 | DNA_pol_B_thumb | 416 | 480 | 1.1e-17 | 63.4 | 8.8e-21 | 3.2e-17 | 61.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1445.1_18337.t1 | gi|676462101|ref|XP_009056159.1| | hypothetical protein LOTGIDRAFT_72364, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1445.1_18337.t1 | gi|524864552|ref|XP_005089111.1| | PREDICTED: DNA-directed DNA/RNA polymerase mu-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1445.1_18337.t1 | gi|524864554|ref|XP_005089112.1| | PREDICTED: DNA-directed DNA/RNA polymerase mu-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1445.1_18337.t1 | gi|291223873|ref|XP_002731933.1| | PREDICTED: DNA nucleotidylexotransferase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1445.1_18337.t1 | gi|72138850|ref|XP_796033.1| | PREDICTED: DNA nucleotidylexotransferase [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1445.1_18337.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1445.1_18337.t1 atgatgaatgcagcgaaacgtcataagattaaagtagaaaataagtataacagtcaagtaactcacatagttaccgaatg tgaaactagagaccaagccttgacgatgctaaaaatttcacctgatgctgagctgccagcagaaatagtaaatgtgaaat ggtttgtagagagtatgaaggcgaagaggcccgtccctgtgacagatgaccatagagtaaaaatagtaacgacaatagag gaatctacaagtgatgcagccagtattgaccaaccagtgattgcagaatggtcctgtcttcggtcaacacccttgaaaca ttataatcaaaggttatgtgatgcactaggaacacttcagaagtttgcagagttacgagatggtgacagtgattattcaa gagcattagcattttgtagagcatcgtgtgtgctgaaaacactacctcacaccctgactgatgtcagagagatagaggga gtaaaggatatagggaagcatgtactcagggtgctaaaggagatacttgaggagggatatagtgaggaagttgaaagcat cagaaacaatccttggtatcaaaagatggtcgtatttgatagcatctttggtgtgggatcagctactgcaaagagatgga taaatttaggtatttcaagtatcaaagaagcaaagcaaaaatacagaaccagtgattggagagtcaactatggattggca ttctatgaagaattgaatgacttggttgtgaggaatgaggcagaaaacttcaaacattttgttgaaacagaggcaaagaa aatcttacctggagttatgatagaacttactggagagaaaggattccttgaaaagttgctgaaagaacttaccaataaag gtttgattttaaggggatggcatgaaaagaacacgttctcagaggaagttttgtataaagacacaaaactctctatgaaa ggacaacttgatcattttgaaaaatggattggtataatgaagtttccaaagtcttggaaggaggctccttgtgcgacggc aaacccaggggatgctagggaggaagatgagggaaatattggctccctccacagcagttatgaggaatcatgtgagccag ataagaaaagacagaagctaaaccctagtgatgatgaatcaccttatgagttagctcatcaggagcatgactgggaggcc aggagggttgatctgatcatatcaccgtacagtcagtattattatgctcttgtaggatggacagggagcaagcagttcaa cagagatctccgcttgtatggtaccagggtcaaatccaagaagttaaccagccatgggttatgggactacaataagaatg tagcactaccagcaactagtgagaaagaagtctttgataacttagaagtaccatttttcccaccagaagaaagaaactgt tga |
|
Protein
| Protein ID | pfu_aug2.0_1445.1_18337.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1445.1_18337.t1 MMNAAKRHKIKVENKYNSQVTHIVTECETRDQALTMLKISPDAELPAEIVNVKWFVESMKAKRPVPVTDDHRVKIVTTIE ESTSDAASIDQPVIAEWSCLRSTPLKHYNQRLCDALGTLQKFAELRDGDSDYSRALAFCRASCVLKTLPHTLTDVREIEG VKDIGKHVLRVLKEILEEGYSEEVESIRNNPWYQKMVVFDSIFGVGSATAKRWINLGISSIKEAKQKYRTSDWRVNYGLA FYEELNDLVVRNEAENFKHFVETEAKKILPGVMIELTGEKGFLEKLLKELTNKGLILRGWHEKNTFSEEVLYKDTKLSMK GQLDHFEKWIGIMKFPKSWKEAPCATANPGDAREEDEGNIGSLHSSYEESCEPDKKRQKLNPSDDESPYELAHQEHDWEA RRVDLIISPYSQYYYALVGWTGSKQFNRDLRLYGTRVKSKKLTSHGLWDYNKNVALPATSEKEVFDNLEVPFFPPEERNC |
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