Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1454.1_15046
Locus scaffold1454.1 : 15406 ... 31305 : -
To GenomeBrowser scaffold1454.1:15406..31305
Genes list of scaffold scaffold1454.1
Synonym pfu_aug1.0_2517.1_01124

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1454.1_15046.t1 gi|751211056|ref|XP_011158253.1| PREDICTED: uncharacterized protein LOC105194840 [Solenopsis invicta] 4.0e-11
pfu_aug2.0_1454.1_15046.t1 gi|391329480|ref|XP_003739200.1| PREDICTED: uncharacterized protein LOC100902106 [Metaseiulus occidentalis] 6.0e-10
pfu_aug2.0_1454.1_15046.t1 gi|645004771|ref|XP_008210751.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100116128 [Nasonia vitripennis] 5.0e-09
pfu_aug2.0_1454.1_15046.t1 gi|193702241|ref|XP_001949348.1| PREDICTED: uncharacterized protein LOC100165402 [Acyrthosiphon pisum] 2.0e-08
pfu_aug2.0_1454.1_15046.t1 gi|755937675|ref|XP_011297173.1| PREDICTED: uncharacterized protein LOC105262959 [Fopius arisanus] 4.0e-08

Transcript
Transcript IDpfu_aug2.0_1454.1_15046.t1
Definition-
>pfu_aug2.0_1454.1_15046.t1
atgtttaacgtcttcaagttcattagcatcattttagagcagataaatttacagcatggaccagccatgcacgacaaaag
agatgattttggcttcaagatagttaatttaatccttggcttgatggcgatgttccaagattgccatcatacggcattta
catctcgcagctcatcagatacgctagagtttgctcccatgtttcggacttccatgataaaaataaagaaattacaaaag
aagggagttttagaaagcgtctgtgctgggacacgaaaaaaggtggatctaatgtactccaaagagagaaccgagccaaa
cacattttggccagtaatgacgtctatgcaggatttcaattcttctagttcatcggtgctgatgcatggtgttagtgtag
tatcatccggtccgactgttagagcaacacctctggatgcattacagtttactggtagctctatgtcatatctagagata
cccaatacagacaacaactttaacggaaccaatgccatgtgctgggaattctacctctattatgaagaaagtcaagactc
cgttcttctggaatacgaaggaaccgttggtgggattcaactgaggctcgtagacacaggtttaaaggctattctccata
cctcatcaggtcatgtgtttgaacatcacgtttacgacaaattagatccctttatttggaggatagtgggctttaatttc
aacaaaaactggaagaactatgaatttgatattttcaccatttccgatccatcgtctgagcaagttgacgaaacgataat
ggagacaaaaagttacgcgcctgaaattatactggacgctgtagggagcattagaataggacaagatcaccatggcaaca
gttcctttaaggggagaatgtcttgagatgggatgagatttgccgagaaatttacaacttttccaattatttccactatt
cctactacaatggaaacggagacttcgaagatattaacatcagaaaaggtagaagcaagcacgacccagcgagcaactga
aacacaacgttccagtcagataactgaagatacaacccacatggaaagcactattaaggaccaaacgacatggatttcta
ctgttgccacaagcgttcgaaggcaaacaacaactgggagcgtaaccgcgcctttagcacaacccacggcaggatatgga
cctcttattatcagatgcatgcactttagcaggatagataatgcagccctcgttggtccatttgacactttacccggtag
cgacttgaaagaatgtgttgaatcttgtataagatctaacagtgtcaacgacaaaagacaaacggtgaacaggattgata
tggctttttatcatcaaatcgctttgctattcctggtagtcgggacttttaaccatgtccagtcacaattcaaccctctc
ttgactgttgatagctgcaccaagagtaaactggttttgaccctgactgacggggcctctgggggtataatatacatcca
gggacagggcgcggcatgtaaacaaacaacccagactggggctgtcactcacgagtttgacttcacctcatgtggaatac
aatgggagtcttcgtttaagattattgtacagaagaagtctctctaccagactggagaagacaaacagattcccattatg
tgtatcacagacctatcagacataacagtggacaacaacctcaacgccctggacaaggatgacgacgctggccagaatct
gacggtcaagcctacagccatcatggccctgtacagtaacaatcaggacgtaagcggcggcaatgtccagctgaccgaca
ccatcagtatggtcatacaactcggctcagatttcgtagatgactttgacatcacggcaaagacctgcacagcatcaact
atatctgtcattgagaattcttgcccaacagacaccgagcttttcccagcgttctcgaagccttcccaaggttccattct
agcttcttttggagctttcagaacaacagatcttagtggaggggctgtcacaatgacattttcttgtacactgcaagtat
gccttggatcttgcgccgcgacaacatgcgccgatggctccagcagctatggtaggaagaagcgagatacttacgaactt
gttgtgtctggctcagcttccggaaacgacgtaagaatgaaacgacaagccccaggtggaggaaacgatttagaggacat
caatgttggttcttctcttagaatcaccactgacgaagttgtcgtacaaatggatgacggagataacggtatttgtatga
acaaagccgctttcatcgcaggtatgttagccgtcattgctagtatcctcgcctctggatccgcctctatcattctgcta
cgtaaggtcatggcaaagaaggacatccttaaagcttacgaatccgagtcctacaaagcataa

Protein
Protein IDpfu_aug2.0_1454.1_15046.t1
Definition-
>pfu_aug2.0_1454.1_15046.t1
MFNVFKFISIILEQINLQHGPAMHDKRDDFGFKIVNLILGLMAMFQDCHHTAFTSRSSSDTLEFAPMFRTSMIKIKKLQK
KGVLESVCAGTRKKVDLMYSKERTEPNTFWPVMTSMQDFNSSSSSVLMHGVSVVSSGPTVRATPLDALQFTGSSMSYLEI
PNTDNNFNGTNAMCWEFYLYYEESQDSVLLEYEGTVGGIQLRLVDTGLKAILHTSSGHVFEHHVYDKLDPFIWRIVGFNF
NKNWKNYEFDIFTISDPSSEQVDETIMETKSYAPEIILDAVGSIRIGQDHHGNSSFKGRMSXDGMRFAEKFTTFPIISTI
PTTMETETSKILTSEKVEASTTQRATETQRSSQITEDTTHMESTIKDQTTWISTVATSVRRQTTTGSVTAPLAQPTAGYG
PLIIRCMHFSRIDNAALVGPFDTLPGSDLKECVESCIRSNSVNDKRQTVNRIDMAFYHQIALLFLVVGTFNHVQSQFNPL
LTVDSCTKSKLVLTLTDGASGGIIYIQGQGAACKQTTQTGAVTHEFDFTSCGIQWESSFKIIVQKKSLYQTGEDKQIPIM
CITDLSDITVDNNLNALDKDDDAGQNLTVKPTAIMALYSNNQDVSGGNVQLTDTISMVIQLGSDFVDDFDITAKTCTAST
ISVIENSCPTDTELFPAFSKPSQGSILASFGAFRTTDLSGGAVTMTFSCTLQVCLGSCAATTCADGSSSYGRKKRDTYEL
VVSGSASGNDVRMKRQAPGGGNDLEDINVGSSLRITTDEVVVQMDDGDNGICMNKAAFIAGMLAVIASILASGSASIILL
RKVMAKKDILKAYESESYKA

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495