Gene
| Gene Model ID | pfu_aug2.0_1454.1_15048 |
|---|---|
| Locus | scaffold1454.1 : 101507 ... 133555 : - |
| To GenomeBrowser | scaffold1454.1:101507..133555 |
| Genes list of scaffold | scaffold1454.1 |
| Synonym | pfu_aug1.0_77.1_50610 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| empty spiracles | GO:0003700 GO:0005213 GO:0005634 GO:0006355 GO:0007275 GO:0007306 GO:0042600 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1454.1_15048.t1 | 2 | 1 | Homeobox | 7 | 49 | 7.1e-22 | 76.7 | 0.029 | 140.0 | 2.1 |
| pfu_aug2.0_1454.1_15048.t1 | 2 | 2 | Homeobox | 310 | 366 | 7.1e-22 | 76.7 | 1.7e-25 | 8.5e-22 | 76.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1454.1_15048.t1 | gi|167004254|ref|NP_001107793.1| | empty spiracles [Tribolium castaneum] | 1.0e-37 |
| pfu_aug2.0_1454.1_15048.t1 | gi|755862908|ref|XP_005179340.2| | PREDICTED: homeotic protein empty spiracles [Musca domestica] | 7.0e-37 |
| pfu_aug2.0_1454.1_15048.t1 | gi|193669354|ref|XP_001948495.1| | PREDICTED: homeobox protein EMX1-like [Acyrthosiphon pisum] | 2.0e-35 |
| pfu_aug2.0_1454.1_15048.t1 | gi|380024040|ref|XP_003695815.1| | 5.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_1454.1_15048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1454.1_15048.t1 atgattatcgaaaggcttacggattctggaaagaaaaaactaaacagaactttctcacgcaaaaagaaaaataggacata cagacggaaacagctccacagaaacacaaaggacaacttatctaatgaactatcttcagtgcaagtgcggaatattgaag acaacaacaacaacaacaacaagaaaacaaagagtgcgcggctccagatttcctgtaagcgtttagaaatactgatctct gctcacagagttggacactttgtttcgaaaagacttacaggagtatacagatggggttcttttcaggaagaaagaaaaca aagtataaattacgtcaagagagctggaaaacaacctggaaatccaaagaaacatacattccatgtatgcatccttaata acctgcgtcactctgaaggaagcagcattcaggctatattcacttatacagaatccacggacgtacacaggaaagacaga ctgaagattttgtcccgtgacagacgcgatgtcccttcaagttcacacgaacaacgtaaagaattgccaccgtttagttc attacacgattcaaggagacttcattcagacttttcaccagttagaagagaaagagactctgagacgttttcaggactac atagtgcttctgaatcattaaaacatttacatgatgtattgtcacaaacctcaggaggtacggggacgtatttccctccc cgggtgtgccggcaccccctgtccagtatcaatcttcattctatgtaccagtcgcagtttcctcagaccacaccccttca tcccctggtgcttaactcctcccgggatatccgttccctccatccctggatggcagacagatatccaggatacttctatc ccagatatccagccccgggattccttttccaaccatatcggaaaccgaagcggattcgaacagcattttctccgtcccag ttgttacagttagagaaagcatttgagaaaagtcattacgtggtaggtcaggagcggaaggacttggcggcagaactaca gcttaccgaaacacaggtgaaagtatggttccagaaccgcaggacaaagcacaagaggataaagtccgaggacggagacg atcctagtcaagacaatggcggctccaaatatacaggaagtgacgtagaaggcaaagactctgatagtgatataagcgac attgatgatatttgtgacaatgatcctatttctttaatgcaacacacttcgccgtcatag |
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Protein
| Protein ID | pfu_aug2.0_1454.1_15048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1454.1_15048.t1 MIIERLTDSGKKKLNRTFSRKKKNRTYRRKQLHRNTKDNLSNELSSVQVRNIEDNNNNNNKKTKSARLQISCKRLEILIS AHRVGHFVSKRLTGVYRWGSFQEERKQSINYVKRAGKQPGNPKKHTFHVCILNNLRHSEGSSIQAIFTYTESTDVHRKDR LKILSRDRRDVPSSSHEQRKELPPFSSLHDSRRLHSDFSPVRRERDSETFSGLHSASESLKHLHDVLSQTSGGTGTYFPP RVCRHPLSSINLHSMYQSQFPQTTPLHPLVLNSSRDIRSLHPWMADRYPGYFYPRYPAPGFLFQPYRKPKRIRTAFSPSQ LLQLEKAFEKSHYVVGQERKDLAAELQLTETQVKVWFQNRRTKHKRIKSEDGDDPSQDNGGSKYTGSDVEGKDSDSDISD IDDICDNDPISLMQHTSPS |
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