Gene
| Gene Model ID | pfu_aug2.0_1460.1_01639 |
|---|---|
| Locus | scaffold1460.1 : 10597 ... 14635 : - |
| To GenomeBrowser | scaffold1460.1:10597..14635 |
| Genes list of scaffold | scaffold1460.1 |
| Synonym | pfu_aug1.0_1084.1_65785 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1460.1_01639.t1 | 2 | 1 | RVP | 206 | 241 | 2.0e-07 | 30.8 | 5.2 | 9700.0 | -3.5 |
| pfu_aug2.0_1460.1_01639.t1 | 2 | 2 | RVP | 310 | 403 | 2.0e-07 | 30.8 | 4.2e-10 | 7.9e-07 | 28.9 |
| pfu_aug2.0_1460.1_01639.t1 | 1 | 1 | Asp_protease_2 | 311 | 395 | 5.2e-06 | 26.8 | 6.5e-09 | 1.2e-05 | 25.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1460.1_01639.t1 | gi|676467125|ref|XP_009057788.1| | hypothetical protein LOTGIDRAFT_175775 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1460.1_01639.t1 | gi|195357872|ref|XP_002045134.1| | GM19302 [Drosophila sechellia] | 0.0 |
| pfu_aug2.0_1460.1_01639.t1 | gi|195357340|ref|XP_002045008.1| | GM24059 [Drosophila sechellia] | 0.0 |
| pfu_aug2.0_1460.1_01639.t1 | gi|645256795|ref|XP_008234114.1| | PREDICTED: uncharacterized protein LOC103333099 [Prunus mume] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1460.1_01639.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1460.1_01639.t1 atgacacataattacgaacttcgatctaagaaaatggcaacaggaggaaaagagacaagtgaaagtgcaggagaaaatat taatatggaggaattaataaacggactaagccaagctttaagaaaaagttcgtctggcggaaatgcgaacatttcaatag aaacatttagaggaaatcctgaggacgatgccaataaatggttagaaaaatttgaggcatgggtcgcattcaacggatgg acaaatgagccagaaaaagtcgccagtgccttacgattaaaattagacggagccgcactttcgtggtttcgcggactgtc cagtgccattgtaggaaacacggcaacactattcgataaattcaggcattactttaatacattacacccaacatggatgc ttgagcaacaactctatgacaggacaatgggatccgaagaaaatctggagtcgtacatcactgatgtcgaagcaagatgc caacggcttaataaagcagaacaggagaagacgactgctttcataagaggattgaatccgtctctccgcatgttcgtgat tcagaagaacccaggttcgtttagagaagcagtccaatcggccagactagcgaaggaatctatgacgatgtcaaacccaa cacagacggaagtaatgcgctcaatagaacaacaagggaaggcaatcgcagatctgaccaccgtgttatgtcagatgaaa gacaggaacgatccgtccgtaaaaagaactcgcgacgttaagtgccaactatgtagcaaaaacggacacgaggcacaaga atgccgacaattttctgtatccagacgcgaggacaagaatcgcgacagaaacaagcagtgttttaagtgcctgacgtacg gacatatcgcccgcaattgtcctggaaatcagggaaattttggtacttatcatacaaatgtcatgattgatacaggtgct gatatatgtgtagcaaatcctagatttttgaatgctttgcagtcgaaaggagtcaaggtctttattgagacttctgataa gaaagctattgtaactgcaaataatcagaaggttcacattgagaaaagtatctctgtaaatatgtatatagatcaagtag aaactagagtcaaattttatttggttccaggtttagaacccaccgtaattttgggtatggactttttgaataagcatggt gcagtcatagatttttcaaagaaaactataaaattcgatcctaggcgtcaattagttacagaatctgaagtaattgtacc acctcattcagaaattgttactattgcaaaaattaagggagcaaaattgccagattctgttattggtttaacatctgaat gtccgtctctttcctctcatggtttattagcaggaaaagttatggctaaaataaatgataacactgttttgcatagatta tgtaatgtgaatgatcaacctgtaacaattaaaaagaacacgcatataggtaaattcgtgtgcatatcagacaaggatag ggtatttcgattgcgagatcagacggatcctgctgtgcggaatgcgggagacagtcgcaataacggtacaataccacacg tccaaggtgatgacctgacggaaagcgagaaattgaaattacatacggttattgaggaataccgtgatgtatttgctgat aaaaacgggagattaggtcaatgtgatatgctgaaacatgaaattaaagtacctagtgatcaaaaaccgattcgacaacg accatacaaaatgggtgcaaaacaaaaagaagtcttggaaaccatggtcactgagatgttagatgacggaataattgaac ctagttcagttaaacaaattcgtgcatttttaggactctctgggtattacagaaaattcatcaaaaactatgctgctact gcgtcacctttgtacaatcttacaaagaaaaatgttaatttcacatgggatgataaatgtgaagccgcatttcaacatct gaaagatgcgttaactagtcctccaatactagcgtatccagacttcgagaagccttttcgactttacactgacgcaagtt cttttgcggtaggtggggtgctagcacaagtacaagacggaatcgaacgtgtaatttgttatactggacgttcattaaat cacactgaacagcaatatggcataacagaaaaggaatgccttgcactcgttttctcagtgaagaaactagactgttatct gcgttacaataagtttactgcatatgtcgatcacgctgcactaaaatggttactttccatgaaggaacctgttggtaaat ttgcaagatggattgcacttttacaatcatacgacatggatattacgtaccgaccaggtgttagtcacggaaatgcagac ggagtaagcagacgaacatacgagacagaagacgatatcgaaactgaaaaccttttagacattttacctaaatatgaaag tacagaagaaaccgaaacacccgctgtgaatgttacaaagaaaaggaatacgaaaattaacaaaagaaacatctcgagag aagaaaaacaatcgtccgacaatctcatagaatcagtaaatatttggacgaaagaacacttgagtgaagaacagagaaaa gatccttggtataatgaaataattacattcctcgaaacaggagatttacctaacaatcaaagccaaaggagaaaaatact tgttttacacccgtactactttattcaagatggcatattataccgcttcgctaaaagaaacaaacgacaataacaataca aaagacagagagacaattcttttggccttcaatgtgtaaagacatcacgaattggatacgagcttgcgaacaatgctctc aacggaaatcacctcaaaatcagacaaaagcaaagatatcacacatgccgatag |
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Protein
| Protein ID | pfu_aug2.0_1460.1_01639.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1460.1_01639.t1 MTHNYELRSKKMATGGKETSESAGENINMEELINGLSQALRKSSSGGNANISIETFRGNPEDDANKWLEKFEAWVAFNGW TNEPEKVASALRLKLDGAALSWFRGLSSAIVGNTATLFDKFRHYFNTLHPTWMLEQQLYDRTMGSEENLESYITDVEARC QRLNKAEQEKTTAFIRGLNPSLRMFVIQKNPGSFREAVQSARLAKESMTMSNPTQTEVMRSIEQQGKAIADLTTVLCQMK DRNDPSVKRTRDVKCQLCSKNGHEAQECRQFSVSRREDKNRDRNKQCFKCLTYGHIARNCPGNQGNFGTYHTNVMIDTGA DICVANPRFLNALQSKGVKVFIETSDKKAIVTANNQKVHIEKSISVNMYIDQVETRVKFYLVPGLEPTVILGMDFLNKHG AVIDFSKKTIKFDPRRQLVTESEVIVPPHSEIVTIAKIKGAKLPDSVIGLTSECPSLSSHGLLAGKVMAKINDNTVLHRL CNVNDQPVTIKKNTHIGKFVCISDKDRVFRLRDQTDPAVRNAGDSRNNGTIPHVQGDDLTESEKLKLHTVIEEYRDVFAD KNGRLGQCDMLKHEIKVPSDQKPIRQRPYKMGAKQKEVLETMVTEMLDDGIIEPSSVKQIRAFLGLSGYYRKFIKNYAAT ASPLYNLTKKNVNFTWDDKCEAAFQHLKDALTSPPILAYPDFEKPFRLYTDASSFAVGGVLAQVQDGIERVICYTGRSLN HTEQQYGITEKECLALVFSVKKLDCYLRYNKFTAYVDHAALKWLLSMKEPVGKFARWIALLQSYDMDITYRPGVSHGNAD GVSRRTYETEDDIETENLLDILPKYESTEETETPAVNVTKKRNTKINKRNISREEKQSSDNLIESVNIWTKEHLSEEQRK DPWYNEIITFLETGDLPNNQSQRRKILVLHPYYFIQDGILYRFAKRNKRQXQYKRQRDNSFGLQCVKTSRIGYELANNAL NGNHLKIRQKQRYHTCR |
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