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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1460.1_01640
Locus scaffold1460.1 : 23806 ... 31327 : +
To GenomeBrowser scaffold1460.1:23806..31327
Genes list of scaffold scaffold1460.1
Synonym pfu_aug1.0_44707.1_05306

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1460.1_01640.t1 gi|676478843|ref|XP_009061558.1| hypothetical protein LOTGIDRAFT_234914 [Lottia gigantea] 3.0e-33
pfu_aug2.0_1460.1_01640.t1 gi|524874035|ref|XP_005093759.1| PREDICTED: uncharacterized protein C19orf47 homolog [Aplysia californica] 9.0e-33
pfu_aug2.0_1460.1_01640.t1 gi|632984427|ref|XP_007909133.1| PREDICTED: uncharacterized protein C19orf47 homolog, partial [Callorhinchus milii] 3.0e-27
pfu_aug2.0_1460.1_01640.t1 gi|242010481|ref|XP_002425996.1| conserved hypothetical protein [Pediculus humanus corporis] 4.0e-27
pfu_aug2.0_1460.1_01640.t1 gi|556951527|ref|XP_005987991.1| PREDICTED: uncharacterized protein C19orf47 homolog [Latimeria chalumnae] 4.0e-26

Transcript
Transcript IDpfu_aug2.0_1460.1_01640.t1
Definition-
>pfu_aug2.0_1460.1_01640.t1
atgcgtacggtgggacgcaaagatcaagaatcaatgggtcctgggcgatttttatgcgtcagagacgcaggacgcagaga
cacctcatactggatcaagttcttcacagactgtggaattcctgcaggggaggctacaaattacgccatcgtgttcacgg
acaataggattcagaaggatatgctgcttgacttaacaaaggaatatctgtcggaaatgggcatcaaaatactcggagat
gtcattgctatcctcaaacatgcaaaggaagttcactctcagcttgcaagggaaaaagtattaaaaggatcttcaaggac
agcttcacctgtaccaactccaaggcgttcaacaggaaagatcacaattacaaacgtctttgctgccaggtcaaaggtta
cgaccatcaagaaaggtcaaccagcaaaacaaaaggccagtggagattgtgctgtgactaaggctaaaaagtcagatctg
agtggtgttaaattcacgattacaaataacatggcaagcaagaaggctttagggttgaaaaagaaagcagctcccgtcat
agtgagtcccccagtcagttcagcaggtgtcctatcaatggatcaaccggacctgaaggtcagtgctagacagaggctcg
gcaaaaaaacggctctaggggtggtgtccagtaccacaggggatgatgaagattcacctgttaaaaagaaagctggtttg
ctaggaagacttggccctcagaaatcagaagtatcgtcaacatcaacagctagttctataaagactaaaaaactgacatt
aaagaaaggaaaaattaccactcaggcagggcagggagtgttcagtcggcttgggaagcaggtcaacacatga

Protein
Protein IDpfu_aug2.0_1460.1_01640.t1
Definition-
>pfu_aug2.0_1460.1_01640.t1
MRTVGRKDQESMGPGRFLCVRDAGRRDTSYWIKFFTDCGIPAGEATNYAIVFTDNRIQKDMLLDLTKEYLSEMGIKILGD
VIAILKHAKEVHSQLAREKVLKGSSRTASPVPTPRRSTGKITITNVFAARSKVTTIKKGQPAKQKASGDCAVTKAKKSDL
SGVKFTITNNMASKKALGLKKKAAPVIVSPPVSSAGVLSMDQPDLKVSARQRLGKKTALGVVSSTTGDDEDSPVKKKAGL
LGRLGPQKSEVSSTSTASSIKTKKLTLKKGKITTQAGQGVFSRLGKQVNT

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