Gene
| Gene Model ID | pfu_aug2.0_1460.1_01642 |
|---|---|
| Locus | scaffold1460.1 : 45606 ... 53000 : + |
| To GenomeBrowser | scaffold1460.1:45606..53000 |
| Genes list of scaffold | scaffold1460.1 |
| Synonym | pfu_aug1.0_15427.1_39696 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1460.1_01642.t1 | 1 | 1 | VWA_2 | 11 | 185 | 5.7e-14 | 52.5 | 5.9e-18 | 8.7e-14 | 51.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1460.1_01642.t1 | gi|260818856|ref|XP_002604598.1| | hypothetical protein BRAFLDRAFT_126767 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1460.1_01642.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1460.1_01642.t1 atggcagttactctacgcggaccatttgagatctgtttctcctttgacaccactggatcaatgtccagttctatcactga agttaaggggcgagtccaggacatgattcagcgcctccaagcggatattccaggaataaggatagcagtattcgctcatg gcgattattgcgacaaggacaagaagggttcgtacgtaacaaaacacatcgatttcagcaccaatgttgccgatttgtgt aaatgggtgaggaatgtaggtccaacaggcggaggtgattcagatgaatgttatgaactagttctacatgaggttcagga tttgtcatggactcccggttcacagagggcgctagtaatgataggagacgccaaccctcacgagcccaactttcctctaa atactttgaaactggattggagaaaagagacagacaaactagctgcaatgggagatcgactttattcgatgttcgtcaat agcttccccggtgtaagaaacttctacgatgaaatagcgaaaagaacaggcggacgaaaagtagatctagaaaacttctc caacatgtttgacttgatcatggccatctgctacagagaacacggcgccgaattctcagatgtatacgagaaagaggttc gagctagagatacatcaaaaggaatacacaaagatttggacgccatgtttggagctttgagagacgatacttcaaacatc tgcttgcaccccttttctcgtcttatacatgtgtgtactgctgcattcactcaaacgacgtcatggttgggatctccttt tactcgttcacatcctgtttccatggatccatcgccatctatgccagtcacagaaaagctgaagccttctaagaaaaaaa ctttcccattaaaatggccggcaaagaaaatatcaaaaccacgaaaaaggaagaagcaaaaggaacaatcatattctaag tttgagaatcttcctaaacttaagagggaagacgtgacagaaaacagttttaacctaaatatgctgtcatggacaccctg gcaacttgcaatctcatcgaaagccgcacacgaaatggacaacagtgaacaatggatggacagaaaagacgacaaaggat gcaaaagatgtcagctgttcggagggaaaactaacgttgcagcactttacgaagtttccgtgcaaagatgtcaaaaggcg aaaagatacgtactttacagtaaattttgttcaggtttcacaaaatcatgggactctcgattactgggaggaaggagcat cagagctcagattgacaatgtcctgtcacaaggttgtaatgtttacatcagacgcgccgttcttggatctgaatctaagc aggaagtgtccaaatcgcttaaacgatacgactacgcatggcggaagttgcgtctacagagatcaggacctagagctatt acgaaatcctctgtgaaactttctgttgcataa |
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Protein
| Protein ID | pfu_aug2.0_1460.1_01642.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1460.1_01642.t1 MAVTLRGPFEICFSFDTTGSMSSSITEVKGRVQDMIQRLQADIPGIRIAVFAHGDYCDKDKKGSYVTKHIDFSTNVADLC KWVRNVGPTGGGDSDECYELVLHEVQDLSWTPGSQRALVMIGDANPHEPNFPLNTLKLDWRKETDKLAAMGDRLYSMFVN SFPGVRNFYDEIAKRTGGRKVDLENFSNMFDLIMAICYREHGAEFSDVYEKEVRARDTSKGIHKDLDAMFGALRDDTSNI CLHPFSRLIHVCTAAFTQTTSWLGSPFTRSHPVSMDPSPSMPVTEKLKPSKKKTFPLKWPAKKISKPRKRKKQKEQSYSK FENLPKLKREDVTENSFNLNMLSWTPWQLAISSKAAHEMDNSEQWMDRKDDKGCKRCQLFGGKTNVAALYEVSVQRCQKA KRYVLYSKFCSGFTKSWDSRLLGGRSIRAQIDNVLSQGCNVYIRRAVLGSESKQEVSKSLKRYDYAWRKLRLQRSGPRAI TKSSVKLSVA |
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