Gene
| Gene Model ID | pfu_aug2.0_1462.1_08390 |
|---|---|
| Locus | scaffold1462.1 : 129646 ... 138967 : + |
| To GenomeBrowser | scaffold1462.1:129646..138967 |
| Genes list of scaffold | scaffold1462.1 |
| Synonym | pfu_aug1.0_803.1_00507 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1462.1_08390.t1 | 3 | 1 | NACHT | 42 | 78 | 3.8e-11 | 42.9 | 0.28 | 520.0 | 0.1 |
| pfu_aug2.0_1462.1_08390.t1 | 3 | 2 | NACHT | 146 | 172 | 3.8e-11 | 42.9 | 1.4e-06 | 0.0025 | 17.4 |
| pfu_aug2.0_1462.1_08390.t1 | 3 | 3 | NACHT | 191 | 258 | 3.8e-11 | 42.9 | 8.8e-08 | 0.00016 | 21.3 |
Transcript
| Transcript ID | pfu_aug2.0_1462.1_08390.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1462.1_08390.t1 atgctcgacgttagtgacgtcataataggcgatatattctatacagctatggagatgggatcaggtgcctggaagagcct aaataactacaatattttgaagaaactagtacaggacatcgacaatcaacttgtgtatctgatagaggatgctgaggaca aattagcaatgctgaaaggagaagatgaggatatcaatgttcagatcttaaggaaaaagttaattcaaataaatcatgat gaaactccaaagattccaatatctccactgcagataacaagtaaaatggcaataggaaagattttcgctccagtctctat cagagaagacctagaatacaaggagaaaggtcgaaatatcgggatgcaaaataagagtacgaaaccagtaaactgtatcg atgatatgctctatatcgacggcaatatggctagaaatgtgtttgtgttgggggaggccggtattgggaaaacggtattc tgtcttagatttgctgataattggtgcaaggcgcataattctgatgaaagtgaatcgaattcggcagattcaaatgaccg tttagtatcatgggtatatcctttgaggaattttgatttcctcttttctattcagttaagacatgttaacaaatctatgt cttctgtcatcgacatgataatcaaagatgcatttcaaagtcatccagggagtcatgacgtcatacgccgcgttctcttg agtgagaattaccggtgtctcatcattattgatggcgttgatgaatggaaaattccagatgaaatccggtcagaattaaa acatgatggcctacctaatactgaaaatatatntcgacgactctatggttaa |
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Protein
| Protein ID | pfu_aug2.0_1462.1_08390.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1462.1_08390.t1 MLDVSDVIIGDIFYTAMEMGSGAWKSLNNYNILKKLVQDIDNQLVYLIEDAEDKLAMLKGEDEDINVQILRKKLIQINHD ETPKIPISPLQITSKMAIGKIFAPVSIREDLEYKEKGRNIGMQNKSTKPVNCIDDMLYIDGNMARNVFVLGEAGIGKTVF CLRFADNWCKAHNSDESESNSADSNDRLVSWVYPLRNFDFLFSIQLRHVNKSMSSVIDMIIKDAFQSHPGSHDVIRRVLL SENYRCLIIIDGVDEWKIPDEIRSELKHDGLPNTENIXRRLYG |
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