Gene
| Gene Model ID | pfu_aug2.0_14625.1_19850 |
|---|---|
| Locus | scaffold14625.1 : 143 ... 2666 : + |
| To GenomeBrowser | scaffold14625.1:143..2666 |
| Genes list of scaffold | scaffold14625.1 |
| Synonym | pfu_aug1.0_1583.1_58579 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calpain-6 isoform x2 | GO:0004198 GO:0005622 GO:0006508 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14625.1_19850.t1 | 1 | 1 | Peptidase_C2 | 28 | 100 | 1.6e-23 | 83.1 | 1.2e-27 | 1.8e-23 | 82.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14625.1_19850.t1 | gi|676425879|ref|XP_009044444.1| | hypothetical protein LOTGIDRAFT_205978 [Lottia gigantea] | 7.9874e-44 |
| pfu_aug2.0_14625.1_19850.t1 | gi|620968361|ref|XP_007658008.1| | PREDICTED: calpain-5-like [Ornithorhynchus anatinus] | 6.0e-30 |
| pfu_aug2.0_14625.1_19850.t1 | gi|260817128|ref|XP_002603439.1| | hypothetical protein BRAFLDRAFT_122588 [Branchiostoma floridae] | 6.0e-30 |
| pfu_aug2.0_14625.1_19850.t1 | gi|597788900|ref|XP_007257854.1| | PREDICTED: calpain-5-like [Astyanax mexicanus] | 2.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_14625.1_19850.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14625.1_19850.t1 atgggatggttcagttccattaagccatacaagggccaagactatgacaaactgaagaaagaggccaaaacaaagggaca tctcttcattgatacagagtttccaccagatgacaggtctttgttttattcccaaggcaaaatggccaatgttgtatgga aaagaccaaagcaaatttgtgacagccctaagttttttgtggagggagccagtgcaggtgatgttaaacagggtcgtcta ggtaactgctggtttgttgccgctagctcctgtcttgccatccacaaggacatctggcataag |
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Protein
| Protein ID | pfu_aug2.0_14625.1_19850.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14625.1_19850.t1 MGWFSSIKPYKGQDYDKLKKEAKTKGHLFIDTEFPPDDRSLFYSQGKMANVVWKRPKQICDSPKFFVEGASAGDVKQGRL GNCWFVAASSCLAIHKDIWHK |
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