Gene
| Gene Model ID | pfu_aug2.0_1469.1_31698 |
|---|---|
| Locus | scaffold1469.1 : 1796 ... 19768 : + |
| To GenomeBrowser | scaffold1469.1:1796..19768 |
| Genes list of scaffold | scaffold1469.1 |
| Synonym | pfu_aug1.0_32888.1_19476 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1469.1_31698.t1 | 2 | 1 | Cation_efflux | 178 | 376 | 2.8e-31 | 108.6 | 1.0e-27 | 1.6e-24 | 86.5 |
| pfu_aug2.0_1469.1_31698.t1 | 2 | 2 | Cation_efflux | 373 | 430 | 2.8e-31 | 108.6 | 2.2e-08 | 3.2e-05 | 23.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1469.1_31698.t1 | gi|524896515|ref|XP_005104731.1| | PREDICTED: metal tolerance protein 9-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1469.1_31698.t1 | gi|676486837|ref|XP_009064103.1| | hypothetical protein LOTGIDRAFT_167973 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1469.1_31698.t1 | gi|156407133|ref|XP_001641399.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1469.1_31698.t1 | gi|676475345|ref|XP_009060441.1| | hypothetical protein LOTGIDRAFT_234372 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1469.1_31698.t1 | gi|72000060|ref|NP_001024065.1| | R02F11.3, isoform a [Caenorhabditis elegans] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1469.1_31698.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1469.1_31698.t1 atgacgagtaaaaaatcggcaactctcgagaatataaatttttctgccacagagaaagatcaggtggatagcactctgtt aagtcgacgcctttctctgggagataaaccaatcaccaacagagacaacgatggttggcagatgcccattgacaagttta catcaaagaaaaaaggcaaaaatagccgacggggcatgcccaaacgagtcagagcattttacaaagctcaggatgagctg atagagacgtatgaagagatgctgcttgacttagatgatgccatggagaatggggaagacgccttaaaagcattttacaa atctcaggatgagctgatagaaatgtatgaagagatgcttcttgacatagatgatgccatggagaatggggaagacgcct ttaaagcattttacaaagctcaggatgagctgatagagacatatgaagagatgcttcttgacgtagatgatgccatggag aatgcagaagacgctttaaagttacaaagaacagcatcagtactcagtaaactaacactagcggccaatgttgttttgct agcagccaagttggtggcctccatactatctggttctatagctatcatatcgagcttggtggacagttttgtggatctag cctctggcatcgtaattaccgtggcaacgcaggctatggcaaggcgcaacccgtatgaatacccacaaggtcgtaccaag ttagagccgatatctatcgtcattttgtcagtcattatgagtctagcgtcactccagctgatccgagagtctgtagagaa gattgtaagtctggctgacggcacagcttctattcccgatgtcactgtacctacaattgttataacagtttccgctattg taatcaagttggtgctattccttgtcagtaggcgtgtctcctcccccagtgtacaggcattagccatggaccacagaaat gacgtcatatccaatacgtttgctctgatctttggttatataggttcccaggacatgcagaataagactggtgtaccagc gttagtttatcttgaccctgtgggtgccatattgatttcgatttacatcgcaatcaactggtatatgacaggctacgaca cggtacgagcgttccacttcggaacaaactttctggtggaggttgacatcgtattaccagaagacatgacgttaaaggaa gcccacgatatcggggagcccctacaacagaagctagaaagactgccggaggttgaaagggcgttcgttcatctcgatta cgaatttgaacatcgtccatttgatgagcataagcagtacattatctacttaatgtttggtgaaggaaaccacaatgtgg acacagtttattactggagttatccctctttgtttgatgaggctgtgcctttatgtacacatcccaccataaataaatat ttaggttgtatatataaacattag |
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Protein
| Protein ID | pfu_aug2.0_1469.1_31698.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1469.1_31698.t1 MTSKKSATLENINFSATEKDQVDSTLLSRRLSLGDKPITNRDNDGWQMPIDKFTSKKKGKNSRRGMPKRVRAFYKAQDEL IETYEEMLLDLDDAMENGEDALKAFYKSQDELIEMYEEMLLDIDDAMENGEDAFKAFYKAQDELIETYEEMLLDVDDAME NAEDALKLQRTASVLSKLTLAANVVLLAAKLVASILSGSIAIISSLVDSFVDLASGIVITVATQAMARRNPYEYPQGRTK LEPISIVILSVIMSLASLQLIRESVEKIVSLADGTASIPDVTVPTIVITVSAIVIKLVLFLVSRRVSSPSVQALAMDHRN DVISNTFALIFGYIGSQDMQNKTGVPALVYLDPVGAILISIYIAINWYMTGYDTVRAFHFGTNFLVEVDIVLPEDMTLKE AHDIGEPLQQKLERLPEVERAFVHLDYEFEHRPFDEHKQYIIYLMFGEGNHNVDTVYYWSYPSLFDEAVPLCTHPTINKY LGCIYKH |
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