Gene
| Gene Model ID | pfu_aug2.0_1469.1_31703 |
|---|---|
| Locus | scaffold1469.1 : 129166 ... 142445 : + |
| To GenomeBrowser | scaffold1469.1:129166..142445 |
| Genes list of scaffold | scaffold1469.1 |
| Synonym | pfu_aug1.0_939.1_43866 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1469.1_31703.t1 | 1 | 1 | NACHT | 274 | 436 | 2.3e-07 | 30.6 | 1.6e-10 | 6.1e-07 | 29.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1469.1_31703.t1 | gi|704267880|ref|XP_010153118.1| | PREDICTED: protein NLRC5, partial [Eurypyga helias] | 7.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1469.1_31703.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1469.1_31703.t1 atggcgtcggcaaatccatttactggatgccagtcagactgggaagtacatatcaaattgatgacaacaatttgttgtga ttacctcggcgcagaatcatggaaagaaaaatttgagaaattcaaattgaatagctttctgtatttaaaaactcctacag agagaagtgtttccacaccttatgatatttggaagcaattggaacataaggatctactacggcccaaggaatatgatgtg ctgaagagattagtgagtgacattgactatgatctagttgatcttatagaggatgcagaagaaagattgtctttcctcca gggagaagaagtcccggaaagaaaacgaaggaaaattgaacaagagtcggacttccatcaaaccatcaagcaaaaattgc ttgagtgtagtgaaaaaatcagcgaaagcgtcccagtatctccattccaaacttacgggatgcttcctgttgaactgtta tattcaaaggtagttgtaaagacagatccgagatatgatgagaaagggcgacanacaaaagaaagtcaagaagaccagtc ggacttccatcaaaccatcaagcaaaaattgcttgagtgtagtgaaaaaatcagcgaaagcgtcccagtatctccattcc aaacttacgggatgcttcctgttgaactgttatattcaaaggtagttgtaaagacagatccgagatatgatgagaaaggg cgacattcttacaaaaagccgaaggagcagagagggaaaaaaattattgtagagcgtccggatgacatattgtttaagga caaagaaccaacaaaacgaatctttatgactggaaatccagcgcatggtaaaacaacgtattgtgtatggctattacagc actggctaagagctcaaaatactacagaaaatgaacaaaatgaatgggaaaaagctttaggaaaatttgactttgttttc ttgataagacttcgtgatgttcagaaatcaagagcttacgtgactgatattatatgtgaggatgttttaaagattgacga agaatcaactgaatggttgaaacacgccctgaaagcaggaaagtaccgtagttttatcatcgttgatggtttggacgagt ggaaccctgacgaggaagtgacaaggatcgatggattcaaaggcatgcctatgacaggtgacattactaattgtgtgatt ttcatatcaatgagacactggaaattccaagctgttgcaggaaatgtgaactccgacgatcgagtggttgaaattgaagg attggatgaaagtgggattaaaaaagtgacggacaatgtactcttcaattactgtaaaatagatacagaaaatcaagatg acaaacagttgtatgatacgataacgaaacgagtgaatcaggaaagaattaattcaatcatgaaaatccctttaatcgca gttctttgtgtacaacttttgtacacaggagatgaaatagggagtagcatgacagcattatataagaaaatgatagaaat gttaattgaacgtgccgacataccgcatgacgtcatagttgcattagacattgacactaatattggatctttgtttcaat cctttaaacgcgttctttgtaagttagggaagatagcttatgatggattggtatctggtaattacagttttgaaattcct gaaaaaacattaataggaccacttggcttaacaggtcaagaattacagttttcattaaaggttgggctcctaagtatgga ggaaacggagagtataatgacaaagagagtaaaactttatttcttccatacatctatgcaagaatttcttagcgcgttat acattgtcgaaaacgaagatatacaaagtgcatttttagagcatctgttcagcattaaacattttttaaagtttcgtgat gtcctgatatttttgtcaggtttgagcacagagttaggttgcagtatatcacagcatatttttgatgctgctaacgctga ttcagaagtaatagaatacaggagaaaccctgaactatgtgaagatcacgtaagtgatagcgtagacgaattgtataaat tacaggcaagttgttacaaggaaatttcgaatgaagaaggacatgatttccaatacaaagtatcagatattcgtatatat agccatagtgacataaatacagtacgaactactgctgatattatctcttaccacaatactgacattaaatccatgtattt aaatgaaataccttctgatgcaaataatggcatccctgacctcctactcacaaaatacctagatcaaactaaggcattga cgtcactttatatacatgggtggggtacaaacaggaccatataccaaatgtgtaatgtgttctcattcttaacatcctta caactgatatatttatcactaaaacgcgatgttatcagtagcttaagtacagcattgaagtcgacgaaagtgattgagac attaggcttggcaagccttcgatatgctaacgataacaaaccagctttattaagtgatgcgataggcattcttcccaacc taccatctctaattacattgaatattaatgtaagacatgaaaatgacaaagaagtattagcagagactttaagtcgtcta tccaatatacaatatattaaatatgatggtgtacatccaaaggatgatgactatgaccgaggtgtagtagatactatgtg taaatggccgagtttgcgttatttgggtttgataaacgtaaatttgggtgactgtggattaaacttttaccataatatgc tacagctagagacaatttatttacttgatgtagaaatgtcaccattaggttgggacaaacttacccagtttctactcaac ataaaccacaacataaacattcagctgtattcagtaaatatagatgagcagtctttggaagaaatccgatcgtccgaaaa ttttgatataactgtagattacactgatacaggtggacatcatctagagtgtaaacgtcagaatgattatatattgtaca gacgcaattag |
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Protein
| Protein ID | pfu_aug2.0_1469.1_31703.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1469.1_31703.t1 MASANPFTGCQSDWEVHIKLMTTICCDYLGAESWKEKFEKFKLNSFLYLKTPTERSVSTPYDIWKQLEHKDLLRPKEYDV LKRLVSDIDYDLVDLIEDAEERLSFLQGEEVPERKRRKIEQESDFHQTIKQKLLECSEKISESVPVSPFQTYGMLPVELL YSKVVVKTDPRYDEKGRXTKESQEDQSDFHQTIKQKLLECSEKISESVPVSPFQTYGMLPVELLYSKVVVKTDPRYDEKG RHSYKKPKEQRGKKIIVERPDDILFKDKEPTKRIFMTGNPAHGKTTYCVWLLQHWLRAQNTTENEQNEWEKALGKFDFVF LIRLRDVQKSRAYVTDIICEDVLKIDEESTEWLKHALKAGKYRSFIIVDGLDEWNPDEEVTRIDGFKGMPMTGDITNCVI FISMRHWKFQAVAGNVNSDDRVVEIEGLDESGIKKVTDNVLFNYCKIDTENQDDKQLYDTITKRVNQERINSIMKIPLIA VLCVQLLYTGDEIGSSMTALYKKMIEMLIERADIPHDVIVALDIDTNIGSLFQSFKRVLCKLGKIAYDGLVSGNYSFEIP EKTLIGPLGLTGQELQFSLKVGLLSMEETESIMTKRVKLYFFHTSMQEFLSALYIVENEDIQSAFLEHLFSIKHFLKFRD VLIFLSGLSTELGCSISQHIFDAANADSEVIEYRRNPELCEDHVSDSVDELYKLQASCYKEISNEEGHDFQYKVSDIRIY SHSDINTVRTTADIISYHNTDIKSMYLNEIPSDANNGIPDLLLTKYLDQTKALTSLYIHGWGTNRTIYQMCNVFSFLTSL QLIYLSLKRDVISSLSTALKSTKVIETLGLASLRYANDNKPALLSDAIGILPNLPSLITLNINVRHENDKEVLAETLSRL SNIQYIKYDGVHPKDDDYDRGVVDTMCKWPSLRYLGLINVNLGDCGLNFYHNMLQLETIYLLDVEMSPLGWDKLTQFLLN INHNINIQLYSVNIDEQSLEEIRSSENFDITVDYTDTGGHHLECKRQNDYILYRRN |
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