Gene
| Gene Model ID | pfu_aug2.0_1472.1_08392 |
|---|---|
| Locus | scaffold1472.1 : 41356 ... 96970 : + |
| To GenomeBrowser | scaffold1472.1:41356..96970 |
| Genes list of scaffold | scaffold1472.1 |
| Synonym | pfu_aug1.0_5991.1_16813 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1472.1_08392.t5 | 3 | 1 | Kazal_2 | 60 | 101 | 2.4e-09 | 36.9 | 2.1e-11 | 5.2e-08 | 32.6 |
| pfu_aug2.0_1472.1_08392.t5 | 3 | 1 | Kazal_1 | 60 | 101 | 1.5e-08 | 34.4 | 6.2e-12 | 1.5e-08 | 34.4 |
| pfu_aug2.0_1472.1_08392.t5 | 3 | 1 | Thyroglobulin_1 | 62 | 84 | 1.3e-27 | 94.8 | 0.17 | 420.0 | 0.3 |
| pfu_aug2.0_1472.1_08392.t5 | 3 | 2 | Thyroglobulin_1 | 123 | 174 | 1.3e-27 | 94.8 | 2.9e-19 | 7.2e-16 | 57.2 |
| pfu_aug2.0_1472.1_08392.t5 | 3 | 2 | Kazal_1 | 134 | 146 | 1.5e-08 | 34.4 | 5.4 | 13000.0 | -3.8 |
| pfu_aug2.0_1472.1_08392.t5 | 2 | 1 | SPARC_Ca_bdg | 195 | 306 | 7.8e-17 | 61.3 | 3.1e-20 | 7.8e-17 | 61.3 |
| pfu_aug2.0_1472.1_08392.t5 | 3 | 2 | Kazal_2 | 284 | 294 | 2.4e-09 | 36.9 | 3.5 | 8500.0 | -3.3 |
| pfu_aug2.0_1472.1_08392.t5 | 3 | 3 | Thyroglobulin_1 | 391 | 451 | 1.3e-27 | 94.8 | 1.2e-15 | 3.0e-12 | 45.6 |
| pfu_aug2.0_1472.1_08392.t5 | 3 | 3 | Kazal_2 | 400 | 410 | 2.4e-09 | 36.9 | 0.11 | 270.0 | 1.5 |
| pfu_aug2.0_1472.1_08392.t5 | 3 | 3 | Kazal_1 | 402 | 421 | 1.5e-08 | 34.4 | 0.12 | 290.0 | 1.5 |
| pfu_aug2.0_1472.1_08392.t5 | 2 | 2 | SPARC_Ca_bdg | 447 | 460 | 7.8e-17 | 61.3 | 3.6 | 9000.0 | -3.3 |
Transcript
| Transcript ID | pfu_aug2.0_1472.1_08392.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1472.1_08392.t1 atgcccccacggacatgggattttatgatatcttggatatttttgtccggtgtgtgtttcttccttgctctgtcagcatc gtcttcatcgtcgtctaaggaattatctgtatccgaaattcaggctacaggaaagacgctatttcggtcattaaggaact ctgagtgcaatattgactgtagtgtaaagaaatatagaccagtctgcgggtcagatggaataacttacagtcacaggtgc tatttaaaacgcgcgaaaaggtgcgatagaaaacgggtcaaggttgtcagcaaaggacagtgctcaccatctagtaggcc ttctactggttgtttgaaagagcgtgacgatgcagtgagactggcaagaaaacctaccttaggggtgttcataccggaat gtgatcgtgacggtaaaccaaagcaacgcaaatccagaggcaaaaagaagggcaagcgacgcaagaagcgacgctgtcga acagctgataggcagcagtttaacaacaatttaattaaagtttttaaagatgaatattttagagatgttcaagtatcatc atcacatagtgtatcatcgggaatgaatgatccagtattaaattcattgaataaaagagtggttgaatggaagttttcta aattagatatgaataatgacaataaactaaggaagaaggaaactagaattctcaagaaaatggtgaaaaaagtgattaag ccaagggcatgtgcaaaaacttttatcggatactgtgatttagataataataagaagatagaaagaaaagagtggacgtt gtgtctaggagttgacataaatagagacaaatccacgcatgccacaccggaacctcagcagtctgaagatacaccaaatt taaccgaccgcttaacgatgtttgagccttctcggaggggtccggtaggggtccccggggggctaatcccccgtccgtct gatcccccgaatatcaaaccacctatggatgataagactcgagactgcatcgaggaaaggaaaaacgctctcctgcagca tcagcaggacccggatggaaaaacatatatcccaagatgcaccgttcttgggaagtgggacaaggcacaatgtcacgaat cctcacaatactgttggtgtgtggaggaggagacgggcaagcctatacccggcacatctacgcacaaagtcatgccaaag tgtgatcaaatcacagataggcaaatgaaaggttgccccctaggcaagaaaagaaaattcttgaaagagatgatcagcaa aatgttggaagatatgagaatgtacaaacagaatggatctgatttaaggtgcccgaagaatagtaaattaccatctggtt cttctggaatgagtgaacaggaagtggcagtccgatggaagttaaacattcttgatgtcaactctaactctaaaatagac aagagagaaatgaaaccattgaggagagagttaccaaagaaaaaagataccagaaaatgtaggcgaaattttattcggta ttgtgatgccgataatgacaagaaaataacctcagatgaatggatagattgtatggggatcaaaaataatatattgcctc tgcctgataatccaaacagaaggggtcccaatccttttgatcagtatttgagaccaagttaa |
|
| Transcript ID | pfu_aug2.0_1472.1_08392.t2 |
| Definition | - |
>pfu_aug2.0_1472.1_08392.t2 atgcccccacggacatgggattttatgatatcttggatatttttgtccggtgtgtgtttcttccttgctctgtcagcatc gtcttcatcgtcgtctaaggaattatctgtatccgaaattcaggctacaggaaagacgctatttcggtcattaaggaact ctgagtgcaatattgactgtagtgtaaagaaatatagaccagtctgcgggtcagatggaataacttacagtcacaggtgc tatttaaaacgcgcgaaaaggtgcgatagaaaacgggtcaaggttgtcagcaaaggacagtgctcaccatctagtaggcc ttctactggttgtttgaaagagcgtgacgatgcagtgagactggcaagaaaacctaccttaggggtgttcataccggaat gtgatcgtgacggtaaaccaaagcaacgcaaatccagaggcaaaaagaagggcaagcgacgcaagaagcgacgctgtcga acagctgataggcagcagtttaacaacaatttaattaaagtttttaaagatgaatattttagagatgttcaagtatcatc atcacatagtgtatcatcgggaatgaatgatccagtattaaattcattgaataaaagagtggttgaatggaagttttcta aattagatatgaataatgacaataaactaaggaagaaggaaactagaattctcaagaaaatggtgaaaaaagtgattaag ccaagggcatgtgcaaaaacttttatcggatactgtgatttagataataataagaagatagaaagaaaagagtggacgtt gtgtctaggagttgacataaatagagacaaatccacgcatgccacaccggaacctcagcagtctgaagagactcgagact gcatcgaggaaaggaaaaacgctctcctgcagcatcagcaggacccggatggaaaaacatatatcccaagatgcaccgtt cttgggaagtgggacaaggcacaatgtcacgaatcctcacaatactgttggtgtgtggaggaggagacgggcaagcctat acccggcacatctacgcacaaagtcatgccaaagtgtgatcaaatcacagataggcaaatgaaaggttgccccctaggca agaaaagaaaattcttgaaagagatgatcagcaaaatgttggaagatatgagaatgtacaaacagaatggatctgattta aggtgcccgaagaatagtaaattaccatctggttcttctggaatgagtgaacaggaagtggcagtccgatggaagttaaa cattcttgatgtcaactctaactctaaaatagacaagagagaaatgaaaccattgaggagagagttaccaaagaaaaaag ataccagaaaatgtaggcgaaattttattcggtattgtgatgccgataatgacaagaaaataacctcagatgaatggata gattgtatggggatcaaaaataatatattgcctctgcctgataatccaaacagaaggggtcccaatccttttgatcagta tttgagaccaagttaa |
|
| Transcript ID | pfu_aug2.0_1472.1_08392.t3 |
| Definition | - |
>pfu_aug2.0_1472.1_08392.t3 atgcccccacggacatgggattttatgatatcttggatatttttgtccggtgtgtgtttcttccttgctctgtcagcatc gtcttcatcgtcgtctaaggaattatctgtatccgaaattcaggctacaggaaagacgctatttcggtcattaaggaact ctgagtgcaatattgactgtagtgtaaagaaatatagaccagtctgcgggtcagatggaataacttacagtcacaggtgc tatttaaaacgcgcgaaaaggtgcgatagaaaacgggtcaaggttgtcagcaaaggacagtgctcaccatctagtaggcc ttctactggttgtttgaaagagcgtgacgatgcagtgagactggcaagaaaacctaccttaggggtgttcataccggaat gtgatcgtgacggtaaaccaaagcaacgcaaatccagaggcaaaaagaagggcaagcgacgcaagaagcgacgctgtcga acagctgataggcagcagtttaacaacaatttaattaaagtttttaaagatgaatattttagagatgttcaagtatcatc atcacatagtgtatcatcgggaatgaatgatccagtattaaattcattgaataaaagagtggttgaatggaagttttcta aattagatatgaataatgacaataaactaaggaagaaggaaactagaattctcaagaaaatggtgaaaaaagtgattaag ccaagggcatgtgcaaaaacttttatcggatactgtgatttagataataataagaagatagaaagaaaagagtggacgtt gtgtctaggagttgacataaatattaaaagaattactagtaaggacgacaaaactatccgagacaaatccacgcatgcca caccggaacctcagcagtctgaagatacaccaaatttaaccgaccgcttaacgatgtttgagccttctcggaggggtccg gtaggggtccccggggggctaatcccccgtccgtctgatcccccgaatatcaaaccacctatggatgataagactcgaga ctgcatcgaggaaaggaaaaacgctctcctgcagcatcagcaggacccggatggaaaaacatatatcccaagatgcaccg ttcttgggaagtgggacaaggcacaatgtcacgaatcctcacaatactgttggtgtgtggaggaggagacgggcaagcct atacccggcacatctacgcacaaagtcatgccaaagtgtgatcaaatcacagataggcaaatgaaaggttgccccctagg caagaaaagaaaattcttgaaagagatgatcagcaaaatgttggaagatatgagaatgtacaaacagaatggatctgatt taaggtgcccgaagaatagtaaattaccatctggttcttctggaatgagtgaacaggaagtggcagtccgatggaagtta aacattcttgatgtcaactctaactctaaaatagacaagagagaaatgaaaccattgaggagagagttaccaaagaaaaa agataccagaaaatgtaggcgaaattttattcggtattgtgatgccgataatgacaagaaaataacctcagatgaatgga tagattgtatggggatcaaaaataatatattgcctctgcctgataatccaaacagaaggggtcccaatccttttgatcag tatttgagaccaagttaa |
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| Transcript ID | pfu_aug2.0_1472.1_08392.t4 |
| Definition | - |
>pfu_aug2.0_1472.1_08392.t4 atgcccccacggacatgggattttatgatatcttggatatttttgtccggtgtgtgtttcttccttgctctgtcagcatc gtcttcatcgtcgtctaaggaattatctgtatccgaaattcaggctacaggaaagacgctatttcggtcattaaggaact ctgagtgcaatattgactgtagtgtaaagaaatatagaccagtctgcgggtcagatggaataacttacagtcacaggtgc tatttaaaacgcgcgaaaaggtgcgatagaaaacgggtcaaggttgtcagcaaaggacagtgctcaccatctagtaggcc ttctactggttgtttgaaagagcgtgacgatgcagtgagactggcaagaaaacctaccttaggggtgttcataccggaat gtgatcgtgacggtaaaccaaagcaacgcaaatccagaggcaaaaagaagggcaagcgacgcaagaagcgacgctgtcga acagctgataggcagcagtttaacaacaatttaattaaagtttttaaagatgaatattttagagatgttcaagtatcatc atcacatagtgtatcatcgggaatgaatgatccagtattaaattcattgaataaaagagtggttgaatggaagttttcta aattagatatgaataatgacaataaactaaggaagaaggaaactagaattctcaagaaaatggtgaaaaaagtgattaag ccaagggcatgtgcaaaaacttttatcggatactgtgatttagataataataagaagatagaaagaaaagagtggacgtt gtgtctaggagttgacataaatattaaaagaattactagtaaggacgacaaaactatccgagacaaatccacgcatgcca caccggaacctcagcagtctgaagatacaccaaatttaaccgaccgcttaacgatgtttgagccttctcggaggggtccg gtaggggtccccggggggctaatcccccgtccgtctgatcccccgaatatcaaaccacctatggatgataagactcgaga ctgcatcgaggaaaggaaaaacgctctcctgcagcatcagcaggacccggatggaaaaacatatatcccaagatgcaccg ttcttgggaagtgggacaaggcacaatgtcacgaatcctcacaatactgttggtgtgtggaggaggagacgggcaagcct atacccggcacatctacgcacaaagtcatgccaaagtgtgatcaaatcacagataggcaaatgaaagattcgaacttgaa tcaatatggcaaaattgatgctacagtttcgcctttaaaagttattcaagcttataaaaattacatgatagaaaccattc atgagtataaagttgccccctag |
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| Transcript ID | pfu_aug2.0_1472.1_08392.t5 |
| Definition | - |
>pfu_aug2.0_1472.1_08392.t5 atgcccccacggacatgggattttatgatatcttggatatttttgtccggtgtgtgtttcttccttgctctgtcagcatc gtcttcatcgtcgtctaaggaattatctgtatccgaaattcaggctacaggaaagacgctatttcggtcattaaggaact ctgagtgcaatattgactgtagtgtaaagaaatatagaccagtctgcgggtcagatggaataacttacagtcacaggtgc tatttaaaacgcgcgaaaaggtgcgatagaaaacgggtcaaggttgtcagcaaaggacagtgctcaccatctagtaggcc ttctactggttgtttgaaagagcgtgacgatgcagtgagactggcaagaaaacctaccttaggggtgttcataccggaat gtgatcgtgacggtacgtactccgatgtgcagtgccattccgcaacgggttattgttggtgtgtcacatctgacggcaaa cccatcaggggaacctcaatgcagggcaaaaaacccaactgcagaggtaaaccaaagcaacgcaaatccagaggcaaaaa gaagggcaagcgacgcaagaagcgacgctgtcgaacagctgataggcagcagtttaacaacaatttaattaaagttttta aagatgaatattttagagatgttcaagtatcatcatcacatagtgtatcatcgggaatgaatgatccagtattaaattca ttgaataaaagagtggttgaatggaagttttctaaattagatatgaataatgacaataaactaaggaagaaggaaactag aattctcaagaaaatggtgaaaaaagtgattaagccaagggcatgtgcaaaaacttttatcggatactgtgatttagata ataataagaagatagaaagaaaagagtggacgttgtgtctaggagttgacataaatattaaaagaattactagtaaggac gacaaaactatccgagacaaatccacgcatgccacaccggaacctcagcagtctgaagatacaccaaatttaaccgaccg cttaacgatgtttgagccttctcggaggggtccggtaggggtccccggggggctaatcccccgtccgtctgatcccccga atatcaaaccacctatggatgataagactcgagactgcatcgaggaaaggaaaaacgctctcctgcagcatcagcaggac ccggatggaaaaacatatatcccaagatgcaccgttcttgggaagtgggacaaggcacaatgtcacgaatcctcacaata ctgttggtgtgtggaggaggagacgggcaagcctatacccggcacatctacgcacaaagtcatgccaaagtgtgatcaaa tcacagataggcaaatgaaagattcgaacttgaatcaatatggcaaaattgatgctacagtttcgcctttaaaagttatt caagcttataaaaattacatgatagaaaccattcatgagtataaagttgccccctag |
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Protein
| Protein ID | pfu_aug2.0_1472.1_08392.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1472.1_08392.t1 MPPRTWDFMISWIFLSGVCFFLALSASSSSSSKELSVSEIQATGKTLFRSLRNSECNIDCSVKKYRPVCGSDGITYSHRC YLKRAKRCDRKRVKVVSKGQCSPSSRPSTGCLKERDDAVRLARKPTLGVFIPECDRDGKPKQRKSRGKKKGKRRKKRRCR TADRQQFNNNLIKVFKDEYFRDVQVSSSHSVSSGMNDPVLNSLNKRVVEWKFSKLDMNNDNKLRKKETRILKKMVKKVIK PRACAKTFIGYCDLDNNKKIERKEWTLCLGVDINRDKSTHATPEPQQSEDTPNLTDRLTMFEPSRRGPVGVPGGLIPRPS DPPNIKPPMDDKTRDCIEERKNALLQHQQDPDGKTYIPRCTVLGKWDKAQCHESSQYCWCVEEETGKPIPGTSTHKVMPK CDQITDRQMKGCPLGKKRKFLKEMISKMLEDMRMYKQNGSDLRCPKNSKLPSGSSGMSEQEVAVRWKLNILDVNSNSKID KREMKPLRRELPKKKDTRKCRRNFIRYCDADNDKKITSDEWIDCMGIKNNILPLPDNPNRRGPNPFDQYLRPS |
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| Protein ID | pfu_aug2.0_1472.1_08392.t2 |
| Definition | - |
>pfu_aug2.0_1472.1_08392.t2 MPPRTWDFMISWIFLSGVCFFLALSASSSSSSKELSVSEIQATGKTLFRSLRNSECNIDCSVKKYRPVCGSDGITYSHRC YLKRAKRCDRKRVKVVSKGQCSPSSRPSTGCLKERDDAVRLARKPTLGVFIPECDRDGKPKQRKSRGKKKGKRRKKRRCR TADRQQFNNNLIKVFKDEYFRDVQVSSSHSVSSGMNDPVLNSLNKRVVEWKFSKLDMNNDNKLRKKETRILKKMVKKVIK PRACAKTFIGYCDLDNNKKIERKEWTLCLGVDINRDKSTHATPEPQQSEETRDCIEERKNALLQHQQDPDGKTYIPRCTV LGKWDKAQCHESSQYCWCVEEETGKPIPGTSTHKVMPKCDQITDRQMKGCPLGKKRKFLKEMISKMLEDMRMYKQNGSDL RCPKNSKLPSGSSGMSEQEVAVRWKLNILDVNSNSKIDKREMKPLRRELPKKKDTRKCRRNFIRYCDADNDKKITSDEWI DCMGIKNNILPLPDNPNRRGPNPFDQYLRPS |
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| Protein ID | pfu_aug2.0_1472.1_08392.t3 |
| Definition | - |
>pfu_aug2.0_1472.1_08392.t3 MPPRTWDFMISWIFLSGVCFFLALSASSSSSSKELSVSEIQATGKTLFRSLRNSECNIDCSVKKYRPVCGSDGITYSHRC YLKRAKRCDRKRVKVVSKGQCSPSSRPSTGCLKERDDAVRLARKPTLGVFIPECDRDGKPKQRKSRGKKKGKRRKKRRCR TADRQQFNNNLIKVFKDEYFRDVQVSSSHSVSSGMNDPVLNSLNKRVVEWKFSKLDMNNDNKLRKKETRILKKMVKKVIK PRACAKTFIGYCDLDNNKKIERKEWTLCLGVDINIKRITSKDDKTIRDKSTHATPEPQQSEDTPNLTDRLTMFEPSRRGP VGVPGGLIPRPSDPPNIKPPMDDKTRDCIEERKNALLQHQQDPDGKTYIPRCTVLGKWDKAQCHESSQYCWCVEEETGKP IPGTSTHKVMPKCDQITDRQMKGCPLGKKRKFLKEMISKMLEDMRMYKQNGSDLRCPKNSKLPSGSSGMSEQEVAVRWKL NILDVNSNSKIDKREMKPLRRELPKKKDTRKCRRNFIRYCDADNDKKITSDEWIDCMGIKNNILPLPDNPNRRGPNPFDQ YLRPS |
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| Protein ID | pfu_aug2.0_1472.1_08392.t4 |
| Definition | - |
>pfu_aug2.0_1472.1_08392.t4 MPPRTWDFMISWIFLSGVCFFLALSASSSSSSKELSVSEIQATGKTLFRSLRNSECNIDCSVKKYRPVCGSDGITYSHRC YLKRAKRCDRKRVKVVSKGQCSPSSRPSTGCLKERDDAVRLARKPTLGVFIPECDRDGKPKQRKSRGKKKGKRRKKRRCR TADRQQFNNNLIKVFKDEYFRDVQVSSSHSVSSGMNDPVLNSLNKRVVEWKFSKLDMNNDNKLRKKETRILKKMVKKVIK PRACAKTFIGYCDLDNNKKIERKEWTLCLGVDINIKRITSKDDKTIRDKSTHATPEPQQSEDTPNLTDRLTMFEPSRRGP VGVPGGLIPRPSDPPNIKPPMDDKTRDCIEERKNALLQHQQDPDGKTYIPRCTVLGKWDKAQCHESSQYCWCVEEETGKP IPGTSTHKVMPKCDQITDRQMKDSNLNQYGKIDATVSPLKVIQAYKNYMIETIHEYKVAP |
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| Protein ID | pfu_aug2.0_1472.1_08392.t5 |
| Definition | - |
>pfu_aug2.0_1472.1_08392.t5 MPPRTWDFMISWIFLSGVCFFLALSASSSSSSKELSVSEIQATGKTLFRSLRNSECNIDCSVKKYRPVCGSDGITYSHRC YLKRAKRCDRKRVKVVSKGQCSPSSRPSTGCLKERDDAVRLARKPTLGVFIPECDRDGTYSDVQCHSATGYCWCVTSDGK PIRGTSMQGKKPNCRGKPKQRKSRGKKKGKRRKKRRCRTADRQQFNNNLIKVFKDEYFRDVQVSSSHSVSSGMNDPVLNS LNKRVVEWKFSKLDMNNDNKLRKKETRILKKMVKKVIKPRACAKTFIGYCDLDNNKKIERKEWTLCLGVDINIKRITSKD DKTIRDKSTHATPEPQQSEDTPNLTDRLTMFEPSRRGPVGVPGGLIPRPSDPPNIKPPMDDKTRDCIEERKNALLQHQQD PDGKTYIPRCTVLGKWDKAQCHESSQYCWCVEEETGKPIPGTSTHKVMPKCDQITDRQMKDSNLNQYGKIDATVSPLKVI QAYKNYMIETIHEYKVAP |
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