Gene
| Gene Model ID | pfu_aug2.0_1472.1_08394 |
|---|---|
| Locus | scaffold1472.1 : 146172 ... 153045 : - |
| To GenomeBrowser | scaffold1472.1:146172..153045 |
| Genes list of scaffold | scaffold1472.1 |
| Synonym | pfu_aug1.0_12501.1_32214 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1472.1_08394.t1 | 2 | 1 | Fibrinogen_C | 61 | 127 | 0.0 | 178.5 | 0.26 | 980.0 | -0.9 |
| pfu_aug2.0_1472.1_08394.t1 | 2 | 2 | Fibrinogen_C | 129 | 323 | 0.0 | 178.5 | 0.0 | 0.0 | 177.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1472.1_08394.t1 | gi|617460820|ref|XP_007571935.1| | PREDICTED: fibrinogen-like protein 1 [Poecilia formosa] | 1.4013e-45 |
| pfu_aug2.0_1472.1_08394.t1 | gi|658870196|ref|XP_008418003.1| | PREDICTED: fibrinogen-like protein 1 [Poecilia reticulata] | 1.4013e-45 |
| pfu_aug2.0_1472.1_08394.t1 | gi|156396659|ref|XP_001637510.1| | predicted protein [Nematostella vectensis] | 9.80909e-45 |
| pfu_aug2.0_1472.1_08394.t1 | gi|115738213|ref|XP_788020.2| | 9.80909e-45 |
Transcript
| Transcript ID | pfu_aug2.0_1472.1_08394.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1472.1_08394.t1 atgctgtcagtttgcgaagtaacagctcttgtaatactgtctttgatatcagtcaggtgtgatactggaactgatgacaa ttcgattgtcaaatttgttcaattgaatattcaggattcactgagctcattgcaaaaacagcttcactacgaaacatcaa cacgtctccagtttgataaagatttgactgagatgttgaggctatatagggctatgagtggtgaaatagaaaggatttca aaggaaaacattgaactgaaacaggacttaatttctctcttgaatacaacagccaatactgatatccttagcagtcaaat tcaatttttgaataagactatgacatcagccttagtaaacataactaaaatccaaacggaaaagccagcagattgtaagg agattctaagttctgaacccaactcgagatccggagtgtacatcatttatcctgatggaacagttggatattcagtatat tgtgatatgacatcacaaggcgggggatggacggtcattcaaaggagaataaacggtatattggattttgataagacttg gaaagaatacaaagacggctttggggatctcaatagcgagcactggataggaaatgatgtgattcatcgattagcaaaga gaagtagaacacttcttgtaagagttctgggtaaggacagcggtgcaacatggaagtatgctcagtatagtgacatgcac gttggcgatgaaaactccaactacagattgacatttagacaaggcagctattctggaaatgcaggagacggccttaacaa ggacggctatggagataacaacaacatgatgttctccaccaaggatagggacaacgaccaatgggatgtatcatgtgcaa atcatcataaaggaggctggtggtttaagaagtgtgaatatggatgtctgaactgtaaatacttgggtagtgacagtacc tgggacgcaattcaatacaaatccacatggatgatgatcagataa |
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Protein
| Protein ID | pfu_aug2.0_1472.1_08394.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1472.1_08394.t1 MLSVCEVTALVILSLISVRCDTGTDDNSIVKFVQLNIQDSLSSLQKQLHYETSTRLQFDKDLTEMLRLYRAMSGEIERIS KENIELKQDLISLLNTTANTDILSSQIQFLNKTMTSALVNITKIQTEKPADCKEILSSEPNSRSGVYIIYPDGTVGYSVY CDMTSQGGGWTVIQRRINGILDFDKTWKEYKDGFGDLNSEHWIGNDVIHRLAKRSRTLLVRVLGKDSGATWKYAQYSDMH VGDENSNYRLTFRQGSYSGNAGDGLNKDGYGDNNNMMFSTKDRDNDQWDVSCANHHKGGWWFKKCEYGCLNCKYLGSDST WDAIQYKSTWMMIR |
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