Gene
| Gene Model ID | pfu_aug2.0_1475.1_18352 |
|---|---|
| Locus | scaffold1475.1 : 2956 ... 68295 : + |
| To GenomeBrowser | scaffold1475.1:2956..68295 |
| Genes list of scaffold | scaffold1475.1 |
| Synonym | pfu_aug1.0_12725.1_03268 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1475.1_18352.t1 | 4 | 1 | F5_F8_type_C | 206 | 297 | 8.1e-14 | 51.5 | 3.1e-06 | 0.0093 | 15.7 |
| pfu_aug2.0_1475.1_18352.t1 | 4 | 2 | F5_F8_type_C | 342 | 413 | 8.1e-14 | 51.5 | 7.5e-09 | 2.2e-05 | 24.2 |
| pfu_aug2.0_1475.1_18352.t1 | 4 | 3 | F5_F8_type_C | 766 | 819 | 8.1e-14 | 51.5 | 0.013 | 39.0 | 4.0 |
| pfu_aug2.0_1475.1_18352.t1 | 4 | 4 | F5_F8_type_C | 1615 | 1642 | 8.1e-14 | 51.5 | 0.15 | 430.0 | 0.6 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 1 | TSP_1 | 1769 | 1815 | 5.1e-31 | 106.5 | 6.5e-10 | 1.9e-06 | 27.8 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 1 | TIL | 1819 | 1832 | 2.1e-06 | 27.7 | 5.0 | 15000.0 | -11.1 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 2 | TSP_1 | 1823 | 1860 | 5.1e-31 | 106.5 | 1.5e-06 | 0.0045 | 17.0 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 2 | TIL | 1874 | 1934 | 2.1e-06 | 27.7 | 7.3e-08 | 0.00022 | 21.2 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 3 | TIL | 1969 | 1986 | 2.1e-06 | 27.7 | 5.0 | 15000.0 | -8.6 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 3 | TSP_1 | 1995 | 2038 | 5.1e-31 | 106.5 | 1.9e-10 | 5.5e-07 | 29.5 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 4 | TIL | 2023 | 2048 | 2.1e-06 | 27.7 | 5.0 | 15000.0 | -11.5 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 4 | TSP_1 | 2093 | 2139 | 5.1e-31 | 106.5 | 7.1e-09 | 2.1e-05 | 24.5 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 5 | TIL | 2127 | 2137 | 2.1e-06 | 27.7 | 5.0 | 15000.0 | -20.5 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 5 | TSP_1 | 2148 | 2194 | 5.1e-31 | 106.5 | 1.5e-08 | 4.5e-05 | 23.4 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 6 | TSP_1 | 2202 | 2247 | 5.1e-31 | 106.5 | 1.3e-10 | 4.0e-07 | 30.0 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 6 | TIL | 2205 | 2252 | 2.1e-06 | 27.7 | 4.3 | 13000.0 | -3.6 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 7 | TIL | 2249 | 2300 | 2.1e-06 | 27.7 | 2.3e-08 | 6.8e-05 | 22.9 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 7 | TSP_1 | 2254 | 2266 | 5.1e-31 | 106.5 | 0.77 | 2300.0 | -1.2 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 8 | TSP_1 | 2328 | 2344 | 5.1e-31 | 106.5 | 5.0 | 15000.0 | -5.7 |
| pfu_aug2.0_1475.1_18352.t1 | 8 | 8 | TIL | 2333 | 2366 | 2.1e-06 | 27.7 | 5.0 | 15000.0 | -17.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1475.1_18352.t1 | gi|565344490|ref|XP_006339345.1| | PREDICTED: formin-2-like [Solanum tuberosum] | 3.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_1475.1_18352.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1475.1_18352.t1 atgagtacgacatctgtcacagaaggcaccacaaaagcgccaccaactgtagcaaccactgcagccacgtcaacacttgg tgtaccgtcaaccactggagcaccaaccgaagcaccgtcaaccactgaagctctaaccaaaacaccgtcaactactggag ctccaaccgaaataccatcaaccactggagcaccatctacaactctagcaccatcaaccactggtgtaccatcaaccact ggagcaccttcaaccactggagttccaaccgaaacgccatcaactactgaagcaccaaccgaagcaccatcaaccactgg agcaccatcaacaacaaaggcaccaaccgaagcaccatcaaccactggggcaccatcaacaactggagcagcatcaacaa ctggatcgccaccaccaacaacaacgactgcatctacagtcactactactaaaatgattattgcttccgttacaccagaa aaagctcctctgtgcgaaaagatcatgtctggagagggtgcgttaccggactcagctattagtttcagcagtgctggttc cgatgggcttggtcgtttgggcggtaaaccttggtaccccgaaatcggattttttgaaggctcttatctcgaagttactt taccagaagccggtatgtttgagcaactcactattatgggtggaactacggactctggtgtacctggatatatcaatgaa tacagagttgatgtggggatgaatggagagttccagacaatcataccggcagtagagggcaatgaggatcctgatacacc ggtgtttgaaaacctaaattttgctttcggtgacaccatacgtatctatccactaaacttcgttaatgcacctgttatgc gtgtagagatacatgtctgctatgttgctccaactacaaccacagcaccagtatcaacatcggaagaaccatgtactgat cctatgagggacgatcaaacaattcccgacagcaacgtcgatttcagcagtacgtctacagcacctaccgatgctaagat cgatggtacgccatggacaccggctgatgacgacagtaatccaagcgtgaccgttaccatggatacaccaacaatagtca aacgtattgacgtacaagccggaggaccacaagacggttacgttccagaattcagagttcaatacaagaccagtccagat ggacccttcgaggaagatactgatcaaaacggcgatcctaagatctatgacggacctcaaagtgcaacagatcgtgtgct catagagctcactaacagagaaccaatttacgctatcaaactgataccacttcccaaagctgatgttcctattgaagtca gattcgagctaattggatgcgaagtctctacaccaagtgcaccaccaccatccacaacagtcacaccaagtgcaccacca ccatccacaacagccactccaagtgcaccaccaccatccacaacagccacaccaagtgcaccaccaccatccacaacagc aacaccacctccatcaacaccaccaacatcagctactacaccaccagtatccacaccaagtacagcaacaacaccttcag tttctgaatgcgacaaagacgatggcatggcatctcctgctttgattcccgatgatagtctaagcgttgatcaaccaggt gacccagctgacctgagaccaacatctgatactccatttacatcagctgttgaacccactgttaccatcactttacctga gagtatagaattaggaaaaattgacctgaatccaaatcctgatgttacttcaaacatcgatacattcaaagttttccttg ttgatccaaaggatagcactcctgtaccattgacaatcaatggagtcacggaattccccgctgaccaaccattatcacta cctgatgacactatggcagagcaaatcatcatcgaagtcgtcggcaaagtcaatcctggtgaaaacgtcaacttacaagt cgccgtattcgcttgttaccatgtttcgtctacaactgcaacaacacctgttacaacacaagtgacaacaactgctgcat ccaccaccaccattgtgaacatttgtaccgagacggagatcatggacgacaccaatgtcataccaagtggagccattacc gttgaaccaaatcctgaaagcagtaatccagataacgtacgtccctcaggagatggagtaccggttgatcaagaaacagc cactgttactattgtcgttccggagggtacggaattgggatcagtgaccttccctgagcccaacactgataatattggag aatttactgtcgaaatccaagaacctgactcagaagcattcacaccttacaaagatggccaggtgttcagtgcggaggta cctttagtgttcccgcaagatgtacttgccaacatgataaggattattccaagacgtgactcaccagccgccccaatgga cgttaaagtagagctgaaagcctgtgtccatgtatctacgacaacgccattatcaacaacacctgtaacaacaagtgcac caccaccgtctacaacagctacacaaagtgtaccaccaccatccacaacagctacacaaagtgtaccaccaccgtccacg acagccacaccaagcgtaccaccaccatccacaacagccacaccaagtgcaccaccaccttctacaacagccacaccaag tgcaccaccaccatccactacagccacaccaagtgcaccaccaccgtccacgacagcaacaccaagcgtaccaccaccat ccacaacagcaacaccaagtgcaccaccaccatccacatcagccacgccaagtgcaccaccaccgtctacaattacatct gggccttcaagctcaccaggaccaataactggtggaacaatatctttcccatctacaacatctacccctgttccatctac aacaacaacgccaagtgttccaccactctctacaacagcaacacaaagtgcaccaccaccttctaccacatcaacaccaa gtgttcaaccatcaagcaccacagtcacaccaagtgcatcgtcaccagtcacaacagccacaccaagtgcaccaccacca tccacaacagccacaccaagtgtactaccatcatccacaactacacctggaccttcaagctcaccaggaccaataactgg tggaacgatatcttttccatctacaacatttacccctactcagtccacaacagcatcaccaagtgtatcgccactatcca caacagtgacaccaagtgtaccaccaccatccacaacagctacaccaagtgcactgccaccatctacaacaacaacacca accacaccaccaccatccacaaccgcaacaccaccaccatcaacaccaccaacatcagctacaacaccaccagtatccac accaagtacagccactccaagtgcaccaccaccatccacaacagccacaccaagtgcaccaccaccatccacaacagcca caccaagtgcaccaccaccatccacaacagccacgccaagtgcaccaccaccatccacaacagccacgccaagtattcca ccaccttcatcaactataagtatttcaacgtcaaccattacaggtactaccacactgaggattactactccctcattctc gacctcttctgcaccaacgtcttcaccgtcgcccacttcgccacagtcaccttctacaactgtctcagtgacgggcacaa cgttgtcgtcaaccatttctgtaacgccaacaccttcacaaacgacagccgtcacgccttgcgtaaagaagaccttgaat tcgcttacgtcggataacctcatcatgaggcctggtgatcttgtacctgattcattggccggatctgagaatcctttctt cggtgatactgaaggcggtctcaataatctcgtgtacacgatactggcagttgatgatgttgcagacatctatgacgtcc aacttaccacaaagaatgtccgaaagatcacagtcagcgtatatgacagcaacggaggcaacgtcaagacaacgagtcaa gacatccctaatggattcatcccatctgttacgacattcaacttcaatggaactattggtattacagtggaaatcagtgt tcttgctgaaccggatacgttagctgaagtatcaggagtagaaatcaaggcttgctatgaaccagctctcccctcatcca ccactccatcaacagcaactacaccatgcaatgaccagatgttagacaaactgacacctcaaatgttcaacataacctca acctctggagaggaacctccaagtcaggctctcgaaacaagcggcttgacactcaaacccgaggatgagaacccacgagt cactgcagtactggatactccagatgatgtgccaattacaaacgttacagtgacactcgataatattgaaaacgctacca tcgctatcgtaaattcggacggagatgttgttgaacagttcaaggtcacaccaaccaatccaggtcagccagagactttc agcgttcagccgactgagccaggaacaaccatacaaatcatacccgtaccaataccatctctacaacctcctgtaatttc tgacttgtcggtagaggcctgtgtccatattccatcaacaacaccattcccaagtacaacagtggcaacgacaaccatgg caacaactgttacaccatgtgtatccaaaatgattagcgtggccgaaaatccaaatgctgttaagttccctcaaccttcc tcaactgatcctagtacggcaccagctgatgtactgtccccatctggctggaaaccagccaacaatgacaatactccagt tttgacagctgaacttcaagacgaagacgatgtggcccaaatcaaggaagtcaaagttgacgtgcaaaatgtacagagca tcaatgcagttctaaaggacaaagatggaaacgtagtggaagaaatcgagggtaaccctgttaatggagaagtgaccttc aattttgatagtgccgagggaatgaccatagaattccagatcacacccgtagatggagagcaacctgtcctaagtaatct ggaaattgaagcttgtattgaaccaagagtttccacggtaaccactatctctgtaaccatgacaactacaactcctccaa taccacatatgtgtgagctgacacgagaagaattccaggaacagtttggttacttcccagacaatatgattggctacata gaaaaagacgactgtacttacacggactgggaatcttggtcagactgcagtaaggactgtgacgtcggtcagagggagag aacccgatctcttttgtcaagtccagtcgaaacaatatgctccgatgaaacgaaacaaacggaagactgtaacattcagc catgtgcaacaacaacaccatcatgtacaccatggcaacaatggtcagattgctcagccagcggatgtgatgttggtagt agatcaagatcaagagactgtttcggaaacggtcaaagtacatacgacgccgaagcttgctactccgatgacccaagctg cttaagcaccacaccaatctgtacggacggaaaggtctggatggactgctccaaccccaatatatctatctgccctattg actgcataggctacagaatgaactcagaatgtaccgaaccagatgcttgccaaccagcctgttattgtccagttggtcaa gttgaaaatgaggaaggcgtttgtatagatatggaagactgcccatgctatagcgagaatggtgaaattgttgtagaggg tgccacttggattccagatggcaataaatgtgaagtatgggtagcattatatttcacagccaataattgtgggcttttgt gtttcagcaaatgtgaatacggacaaactgtttgtgatccggttaacgactgttgtgactggagtgactggggacattgg ggagtatgtagcacgacatgtggcgagggaactcagaacagatacaggacccttaagactggaaatagcacatcatgtgg ttcagaccaggagacagctacttgcaataacccagagtctttggaatgtgtagattgtgtcaaggatggaataacatacc aacggggtgaactaataccttcaatgagcactcaatgtcaagactgtgcttgtatgggaaataatgagattcattgcatg aattctacatcaaagaagattgacggaaactgggctgcatggggagaatggtcaacttgtacaacaaactgcacaggtgg tatccgacataggacaagaagttgtaccgatcctctcccattatgcaacggcctgtcatgcccaggggataatgaagaaa cagaatcctgcaaccaaggcatctcatgctgcactgttaagcaatgggagtcatggactacttgttctcaaacttgtgat ggaggcaagcagttccgtatcagaggctatgaagatcctaacgatcaattaatatgtgacgtagatgttaaggaggaaag ggactgtaacacagatccatgtatcaccatctgtaatgtaaccacttggtcagactggacaccatgtacacaaacatgtg gccaaggaactaagacacgtgatcgaagcattactggtgaagtagttgcagattgtccagataatctttttgagacagac acatgttttgctggagagtgtgtatgtgccgacaacgagaaatggtccaatggttctgaatgcagaaggacatgtgctaa cagatacgacaatcttggatattgcaatgaaataggatgtgtatgtgaaaacggatactactatgatgataatggaaatt gtgtcaacgaatccatttgtgacatttgtacagtcaacggcgtaaactatacatccggagaaacgttcccgaacccgatt aatcaatgtgaaatttgtgaatgtattgacggacaagagtcgtgctcaagatactgttctataccaacatgtgctgagga tgaagaactgtcatacaatcctgaagacacgcccgactcctgttgtcctgtgtgtaaaccaaaaccaaaggatacctgta ctctccgcacgaaaacggaagtcctcactgcatcaaatggatgtgtttcgaatggatcagtcacatttacatattgtgaa ggtggatgtggtaattccacatatgaacctatgcttcggttgaatggtgatttaatgccgaactcgaaatcagactgtaa atgttgcacaggtgataaacaaggagaaaaagaaatcgtactactctgtcccggagaaggcacgcagagagctaaaatcg atatcatcactaaatgtggttgcaatttatgtgcagattcagatacagcaccaggaagaagaagaagacgttaa |
|
Protein
| Protein ID | pfu_aug2.0_1475.1_18352.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1475.1_18352.t1 MSTTSVTEGTTKAPPTVATTAATSTLGVPSTTGAPTEAPSTTEALTKTPSTTGAPTEIPSTTGAPSTTLAPSTTGVPSTT GAPSTTGVPTETPSTTEAPTEAPSTTGAPSTTKAPTEAPSTTGAPSTTGAASTTGSPPPTTTTASTVTTTKMIIASVTPE KAPLCEKIMSGEGALPDSAISFSSAGSDGLGRLGGKPWYPEIGFFEGSYLEVTLPEAGMFEQLTIMGGTTDSGVPGYINE YRVDVGMNGEFQTIIPAVEGNEDPDTPVFENLNFAFGDTIRIYPLNFVNAPVMRVEIHVCYVAPTTTTAPVSTSEEPCTD PMRDDQTIPDSNVDFSSTSTAPTDAKIDGTPWTPADDDSNPSVTVTMDTPTIVKRIDVQAGGPQDGYVPEFRVQYKTSPD GPFEEDTDQNGDPKIYDGPQSATDRVLIELTNREPIYAIKLIPLPKADVPIEVRFELIGCEVSTPSAPPPSTTVTPSAPP PSTTATPSAPPPSTTATPSAPPPSTTATPPPSTPPTSATTPPVSTPSTATTPSVSECDKDDGMASPALIPDDSLSVDQPG DPADLRPTSDTPFTSAVEPTVTITLPESIELGKIDLNPNPDVTSNIDTFKVFLVDPKDSTPVPLTINGVTEFPADQPLSL PDDTMAEQIIIEVVGKVNPGENVNLQVAVFACYHVSSTTATTPVTTQVTTTAASTTTIVNICTETEIMDDTNVIPSGAIT VEPNPESSNPDNVRPSGDGVPVDQETATVTIVVPEGTELGSVTFPEPNTDNIGEFTVEIQEPDSEAFTPYKDGQVFSAEV PLVFPQDVLANMIRIIPRRDSPAAPMDVKVELKACVHVSTTTPLSTTPVTTSAPPPSTTATQSVPPPSTTATQSVPPPST TATPSVPPPSTTATPSAPPPSTTATPSAPPPSTTATPSAPPPSTTATPSVPPPSTTATPSAPPPSTSATPSAPPPSTITS GPSSSPGPITGGTISFPSTTSTPVPSTTTTPSVPPLSTTATQSAPPPSTTSTPSVQPSSTTVTPSASSPVTTATPSAPPP STTATPSVLPSSTTTPGPSSSPGPITGGTISFPSTTFTPTQSTTASPSVSPLSTTVTPSVPPPSTTATPSALPPSTTTTP TTPPPSTTATPPPSTPPTSATTPPVSTPSTATPSAPPPSTTATPSAPPPSTTATPSAPPPSTTATPSAPPPSTTATPSIP PPSSTISISTSTITGTTTLRITTPSFSTSSAPTSSPSPTSPQSPSTTVSVTGTTLSSTISVTPTPSQTTAVTPCVKKTLN SLTSDNLIMRPGDLVPDSLAGSENPFFGDTEGGLNNLVYTILAVDDVADIYDVQLTTKNVRKITVSVYDSNGGNVKTTSQ DIPNGFIPSVTTFNFNGTIGITVEISVLAEPDTLAEVSGVEIKACYEPALPSSTTPSTATTPCNDQMLDKLTPQMFNITS TSGEEPPSQALETSGLTLKPEDENPRVTAVLDTPDDVPITNVTVTLDNIENATIAIVNSDGDVVEQFKVTPTNPGQPETF SVQPTEPGTTIQIIPVPIPSLQPPVISDLSVEACVHIPSTTPFPSTTVATTTMATTVTPCVSKMISVAENPNAVKFPQPS STDPSTAPADVLSPSGWKPANNDNTPVLTAELQDEDDVAQIKEVKVDVQNVQSINAVLKDKDGNVVEEIEGNPVNGEVTF NFDSAEGMTIEFQITPVDGEQPVLSNLEIEACIEPRVSTVTTISVTMTTTTPPIPHMCELTREEFQEQFGYFPDNMIGYI EKDDCTYTDWESWSDCSKDCDVGQRERTRSLLSSPVETICSDETKQTEDCNIQPCATTTPSCTPWQQWSDCSASGCDVGS RSRSRDCFGNGQSTYDAEACYSDDPSCLSTTPICTDGKVWMDCSNPNISICPIDCIGYRMNSECTEPDACQPACYCPVGQ VENEEGVCIDMEDCPCYSENGEIVVEGATWIPDGNKCEVWVALYFTANNCGLLCFSKCEYGQTVCDPVNDCCDWSDWGHW GVCSTTCGEGTQNRYRTLKTGNSTSCGSDQETATCNNPESLECVDCVKDGITYQRGELIPSMSTQCQDCACMGNNEIHCM NSTSKKIDGNWAAWGEWSTCTTNCTGGIRHRTRSCTDPLPLCNGLSCPGDNEETESCNQGISCCTVKQWESWTTCSQTCD GGKQFRIRGYEDPNDQLICDVDVKEERDCNTDPCITICNVTTWSDWTPCTQTCGQGTKTRDRSITGEVVADCPDNLFETD TCFAGECVCADNEKWSNGSECRRTCANRYDNLGYCNEIGCVCENGYYYDDNGNCVNESICDICTVNGVNYTSGETFPNPI NQCEICECIDGQESCSRYCSIPTCAEDEELSYNPEDTPDSCCPVCKPKPKDTCTLRTKTEVLTASNGCVSNGSVTFTYCE GGCGNSTYEPMLRLNGDLMPNSKSDCKCCTGDKQGEKEIVLLCPGEGTQRAKIDIITKCGCNLCADSDTAPGRRRRR |
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