Gene
| Gene Model ID | pfu_aug2.0_1478.1_28306 |
|---|---|
| Locus | scaffold1478.1 : 9702 ... 24615 : - |
| To GenomeBrowser | scaffold1478.1:9702..24615 |
| Genes list of scaffold | scaffold1478.1 |
| Synonym | pfu_aug1.0_5024.1_01888 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1478.1_28306.t1 | 1 | 1 | HLH | 117 | 169 | 3.3e-12 | 45.8 | 9.1e-16 | 6.7e-12 | 44.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1478.1_28306.t1 | gi|736221015|ref|XP_010779864.1| | PREDICTED: microphthalmia-associated transcription factor-like isoform X2 [Notothenia coriiceps] | 4.0e-15 |
| pfu_aug2.0_1478.1_28306.t1 | gi|736221010|ref|XP_010779863.1| | PREDICTED: microphthalmia-associated transcription factor-like isoform X1 [Notothenia coriiceps] | 5.0e-15 |
| pfu_aug2.0_1478.1_28306.t1 | gi|242025227|ref|XP_002433027.1| | Microphthalmia-associated transcription factor, putative [Pediculus humanus corporis] | 1.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_1478.1_28306.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1478.1_28306.t1 atgaatggaccgagagagcagaatatgttccaaccacatgcaaaccatgaatgtcgtgggcatagctcaggatggcatgg taatttacaggttccgagttcacagcaaatgccactcaaagctcattcctgtcctggattctccagaccaaccacttaca ggattaatcaaatgaatggaagcgcaccgatatctttttctgcgacatacaatgatctgtcatctggatacagtagccca tctagcagtttttcagatcagaatactgagggcatgtcctatgtgcataattttgctgcttcatcttccttcaagaatag acaatcagtacctgaaagggaacaagaaaggaaagccaagcacacggaagttgagaagagaagaagaaaacagatagatg cttatatcaaagagctcttgactctccttcctatgtctaaagatccaagtataaaaaaatccaaaggtaacattctaaaa tggacggttgagtatgtcaaggaactgaaaagtgatcaagataaaataccagggatagaaacccagatttcagacctcga aatacagaatagactgcttcttaaaataattggggagttagaaaaaactctgagagagcatggtgtgattcatgaagttg acatgaagcaattgtcttccgaaacgtcttcatcgccgacatttcaacacttagcaaataatcgtatacgtccatttgaa agaagcgttgatgtcatggagacgttttcacaatctcttggcgatgacaaaagatcattcgaaaagagtaatgatatgac gtcaatgcaacctgtcattcacagattctatcaaaacatgacgtctctaccacatgatacccagggaccaaatcacaacc tggcttcttcacaacctgaaatccagggattctttcacaacccgacgtctctgaaatatgaaagccagagatcttatgag aatatgatttctctagaacatgatggcaagggatcaaacctcaagcttgcgtctttacagcctgacatccatggatcaaa tcacagcccaatgtcactaaaaactgatatccaggaatattttcagaacaatgtgattggaccacagggatcgtggcaac aaagtcagaattttgtaatgccggaaaatgactttacttctcaaaaccattccaccagagaccaaaattatagcttatat caaaagaatctcgatgcaaatgcccaaaatactataatgcaaaattcagaaacgaattctctaaactcgatggtttcaac agagcaatacaccagtttccaagatcttttccattcagctggataa |
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Protein
| Protein ID | pfu_aug2.0_1478.1_28306.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1478.1_28306.t1 MNGPREQNMFQPHANHECRGHSSGWHGNLQVPSSQQMPLKAHSCPGFSRPTTYRINQMNGSAPISFSATYNDLSSGYSSP SSSFSDQNTEGMSYVHNFAASSSFKNRQSVPEREQERKAKHTEVEKRRRKQIDAYIKELLTLLPMSKDPSIKKSKGNILK WTVEYVKELKSDQDKIPGIETQISDLEIQNRLLLKIIGELEKTLREHGVIHEVDMKQLSSETSSSPTFQHLANNRIRPFE RSVDVMETFSQSLGDDKRSFEKSNDMTSMQPVIHRFYQNMTSLPHDTQGPNHNLASSQPEIQGFFHNPTSLKYESQRSYE NMISLEHDGKGSNLKLASLQPDIHGSNHSPMSLKTDIQEYFQNNVIGPQGSWQQSQNFVMPENDFTSQNHSTRDQNYSLY QKNLDANAQNTIMQNSETNSLNSMVSTEQYTSFQDLFHSAG |
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