Gene
| Gene Model ID | pfu_aug2.0_1478.1_28308 |
|---|---|
| Locus | scaffold1478.1 : 63905 ... 71305 : - |
| To GenomeBrowser | scaffold1478.1:63905..71305 |
| Genes list of scaffold | scaffold1478.1 |
| Synonym | pfu_aug1.0_16196.1_25498 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1478.1_28308.t1 | 1 | 1 | HDNR | 4 | 125 | 9.8e-30 | 103.7 | 1.4e-33 | 2.0e-29 | 102.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1478.1_28308.t1 | gi|524894336|ref|XP_005103667.1| | PREDICTED: uncharacterized protein LOC101849946 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1478.1_28308.t1 | gi|676441711|ref|XP_009049579.1| | hypothetical protein LOTGIDRAFT_173558 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1478.1_28308.t1 | gi|260798905|ref|XP_002594440.1| | hypothetical protein BRAFLDRAFT_72173 [Branchiostoma floridae] | 2.0e-34 |
| pfu_aug2.0_1478.1_28308.t1 | gi|291236867|ref|XP_002738364.1| | PREDICTED: uncharacterized protein LOC100371168 [Saccoglossus kowalevskii] | 6.0e-32 |
| pfu_aug2.0_1478.1_28308.t1 | gi|198418583|ref|XP_002128281.1| | PREDICTED: uncharacterized protein LOC100175394 [Ciona intestinalis] | 1.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_1478.1_28308.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1478.1_28308.t1 atggcggcgaccgaaataatcggcagttggtttccatcaggataccatggtcatttcagaagtaaaagtagattggattt tgtgtgtgaataccgacaacttgccaaacctcaaccacccaaaaggttccttaacaggtcaaagcaacctacaggtagac atgtgttctccaatcatgacaacagagaatctttcctgaacgacgccctttactttgaacagggactaggaaggaaaaga aatcccaatagagcctatagttttaagcaagatttcattacatggatgccagagagagagtatgttaatagcacactgag acccttgacatcaacatataaaaacgacttcaaaaagaatggtgtcccccaaatatatgtgaccaaacctaagacttcat ttgatggagttgacactacaagctatagatatgctcatggtagcgaaacagccaatccacataggacagttattaacgct atgaacaatgatgcattgaatcttagcttactcaaccgcaaaaatcgggcaatgtcagcaaaaatgccagttagagaaag tgtggcttcatgtatgttttggcatgattctggtaagaaggatggtcagaggcccaaaacagcgtatgtacagagttcgg tcccaaataattccacatttaacagtcagtcctcagggtcggttaacgctacccatgaaccgcatccaccaccatcacaa ccaatggtgcaaaacagtgtaccaatgtcaacacaagggaacaacggttcctcatcaccggttaggcaagtggtacaacc accatcaccaaccaaaccagagccgaaagtggtatggcaggcacaacctcaaaccatcacagaaccagcagcaaccatgc cacctcaaccaaaacctaccctggcatggtcagcacctcaaccggtgccagcagaggtcacatgtgcatga |
|
Protein
| Protein ID | pfu_aug2.0_1478.1_28308.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1478.1_28308.t1 MAATEIIGSWFPSGYHGHFRSKSRLDFVCEYRQLAKPQPPKRFLNRSKQPTGRHVFSNHDNRESFLNDALYFEQGLGRKR NPNRAYSFKQDFITWMPEREYVNSTLRPLTSTYKNDFKKNGVPQIYVTKPKTSFDGVDTTSYRYAHGSETANPHRTVINA MNNDALNLSLLNRKNRAMSAKMPVRESVASCMFWHDSGKKDGQRPKTAYVQSSVPNNSTFNSQSSGSVNATHEPHPPPSQ PMVQNSVPMSTQGNNGSSSPVRQVVQPPSPTKPEPKVVWQAQPQTITEPAATMPPQPKPTLAWSAPQPVPAEVTCA |
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