Gene
| Gene Model ID | pfu_aug2.0_1478.1_28311 |
|---|---|
| Locus | scaffold1478.1 : 109466 ... 114505 : - |
| To GenomeBrowser | scaffold1478.1:109466..114505 |
| Genes list of scaffold | scaffold1478.1 |
| Synonym | pfu_aug1.0_513.1_00340 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1478.1_28311.t1 | 2 | 1 | Somatomedin_B | 223 | 248 | 1.6e-06 | 27.9 | 3.3e-06 | 0.025 | 14.5 |
| pfu_aug2.0_1478.1_28311.t1 | 2 | 2 | Somatomedin_B | 307 | 327 | 1.6e-06 | 27.9 | 2.8e-07 | 0.0021 | 18.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1478.1_28311.t1 | gi|328719877|ref|XP_003246888.1| | PREDICTED: uncharacterized protein LOC100570050 [Acyrthosiphon pisum] | 4.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_1478.1_28311.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1478.1_28311.t1 atgtataatgctacaattgggtacgatcaagactatccaatgtataatgctacaattgggtacgactatccaatgtataa tgttacagagggatacggctatctaatgtataatgctacagatgaatacgatcgcgactatccaatgcataatgctaccg tgggatacgactatccaatgcataatgctaccgtgggatacgactatccaaggcataatgctacagatttatacgatcac gaatatccaatgtataatgctaccgtgggatacgactatccaatgcaaaatgctacaaatggatacgatcacgacaatcc aatgcataatgctacagagggatacgactatctaatgtataatgctacagatggatacgatcgcgactatccaatgcata atgctaccgtgggatacgactatccaatgcataatgctacagtgggatacgactatctaatgcataatgctacagaggga tacgatcaagactatccaatgtataatgctacagatgggtctgactatgataacaacaatgactacacatatgactataa ggatgactacttcgaaaactttatggaagagtactttgaaaacaacagaggcgtcagtaaaaagaattactttgacgtag acggagatgattgtgctagtttctatacgtgtaactccagcttctcctatcgtacatgttactgtgataaaatgtgcgag gcttacaacgattgttgttttgatgcaggatactctgttggatcgagtaccccgactgataaacaaaaagagttgatagg ttatatgagttgcaaagctttaccggatatttacacagattggtatatgttcataattgattcttgtccttctgattcaa atgtttatatcaagcatctatgctcaaatgttgatgtcgantcctatcgtacatgttactgtgataaaatgtgcgaggct tacaacgattgttgttttgatgcaggatactctgttggatcgagtaccccgactgataaacaaaaagagttgataggtta tatgagttgcaaagttttaccggatatttacacagattggtatatgttcataattgattcttgtccttctgattcaaatg tttatatcaagcatctatgctcaaatgttgatgtcgatgacatttacagtagaactcctgcgagcggaaaagaaagtggg atgatttacaaaaacatgttctgtgctatatgtcatggagaagactttttactttggcttccagagatttactgcgagtg ggggatgtcatatacgggaaactataccacagaaacgctgctgaatttggaggaatgccgattgagttttgttccaaatg atagctcggtggagattcgaatctgctatcctatggtttcggggtgctcccccgaaagtgattataggacgttatctaat gttactaataaatgtgaatctgcccagaacaagattgtttttacactcgataaagtgtataagaataagtactgttatga atgtgacattcaaaaagcaagcaatgcttcgtgctcccgttccgattacaatgtaacatttcctggggggtcacgtggac tattcatgtacagctaccgaattttatttaatcttgaagatagaaaagcaaagagtaccaaagaccatttgttcttccct tcagaagaggaggaatataaccttgaaaaaaacacatttaatttgctaaagatcttttatcttaattttgttttgtttta tgactatgggctcaaaacctaccagcacgaggacgcaaaacagaaaataacaaagaaatggcctaaccagtgggcacctc taaggaatgcgctggtatag |
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Protein
| Protein ID | pfu_aug2.0_1478.1_28311.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1478.1_28311.t1 MYNATIGYDQDYPMYNATIGYDYPMYNVTEGYGYLMYNATDEYDRDYPMHNATVGYDYPMHNATVGYDYPRHNATDLYDH EYPMYNATVGYDYPMQNATNGYDHDNPMHNATEGYDYLMYNATDGYDRDYPMHNATVGYDYPMHNATVGYDYLMHNATEG YDQDYPMYNATDGSDYDNNNDYTYDYKDDYFENFMEEYFENNRGVSKKNYFDVDGDDCASFYTCNSSFSYRTCYCDKMCE AYNDCCFDAGYSVGSSTPTDKQKELIGYMSCKALPDIYTDWYMFIIDSCPSDSNVYIKHLCSNVDVXSYRTCYCDKMCEA YNDCCFDAGYSVGSSTPTDKQKELIGYMSCKVLPDIYTDWYMFIIDSCPSDSNVYIKHLCSNVDVDDIYSRTPASGKESG MIYKNMFCAICHGEDFLLWLPEIYCEWGMSYTGNYTTETLLNLEECRLSFVPNDSSVEIRICYPMVSGCSPESDYRTLSN VTNKCESAQNKIVFTLDKVYKNKYCYECDIQKASNASCSRSDYNVTFPGGSRGLFMYSYRILFNLEDRKAKSTKDHLFFP SEEEEYNLEKNTFNLLKIFYLNFVLFYDYGLKTYQHEDAKQKITKKWPNQWAPLRNALV |
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