Gene
| Gene Model ID | pfu_aug2.0_1480.1_01655 |
|---|---|
| Locus | scaffold1480.1 : 3226 ... 27364 : + |
| To GenomeBrowser | scaffold1480.1:3226..27364 |
| Genes list of scaffold | scaffold1480.1 |
| Synonym | pfu_aug1.0_327.1_50807 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium- and chloride-dependent neutral and basic amino acid transporter b(0+) | GO:0006810 GO:0044425 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1480.1_01655.t1 | 3 | 1 | SNF | 35 | 112 | 0.0 | 512.2 | 5.6e-33 | 4.2e-29 | 101.4 |
| pfu_aug2.0_1480.1_01655.t1 | 3 | 2 | SNF | 116 | 322 | 0.0 | 512.2 | 9.90017e-42 | 7.3e-38 | 130.3 |
| pfu_aug2.0_1480.1_01655.t1 | 3 | 3 | SNF | 321 | 597 | 0.0 | 512.2 | 0.0 | 0.0 | 290.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1480.1_01655.t1 | gi|676486870|ref|XP_009064114.1| | hypothetical protein LOTGIDRAFT_235858 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1480.1_01655.t1 | gi|82830409|ref|NP_001032633.1| | sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_1480.1_01655.t1 | gi|148540298|ref|NP_001091931.1| | sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) [Bos taurus] | 0.0 |
| pfu_aug2.0_1480.1_01655.t1 | gi|741980840|ref|XP_010819614.1| | PREDICTED: sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) isoform X1 [Bos taurus] | 0.0 |
| pfu_aug2.0_1480.1_01655.t1 | gi|555974822|ref|XP_005899401.1| | PREDICTED: sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) [Bos mutus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1480.1_01655.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1480.1_01655.t1 atggaggggaaatacaagtttaagagtgacaaacaactgggccatgacaccaacggatccgtgacggttgttaatggcga cggccgggaagaagaggaagatagaggccagtggggctccaaatgggagttcatcttgtcgtgtgtagggctctccgtgg ggctggggaacgtttggaggttcccatacctggcttacgataatggtggagctgcctttgtcattgcttacttgatcctg cagtttctgatcggtaagccaatgtactttatggagctcgtgatgggacagtactctggcaagggacctacagctgtttg gaatatgaacccgagtgctaaagctgcctttgtcattgcttacttgatcctgcagtttctgatcggtaagccaatgtact ttatggagctcgtgatgggacagtactctggcaagggacctacagctgtttggaatatgaacccgagtgctaaaggaatt ggtgtttccatggccctcatatccctgatcgtggccatttactataacgttatcatggcctatacactgttctacttctt ctcatcaatgcagaccaacctaccgtggatgcagtgcaaagatgaatggtatcaatatgggtgcgttgagaagaccacac cgaacataccatactgttcgttcaacatgtccgtaaactacgaaaaattcaacgacacagcttgtaggtgttttgagaac agtacctttcatatgagcagctatcttgacccattaggattcaactgtaccaatacaacatggaaaggggacgaaccagt ggctgtggctcagttgttcttcgacaaagcggttattgaaaaggcacctacgctgaagattgacgagatgggggcgccac tgtggaagctatcgctgtgtctgctgctttcatggatagtcgtcgtctgctgtctaatcaggggagttaaatcatcagga aaggtatgggtggctgctgcgggacagatgtttttctctctaagcgtgtcgtttggaggaattatcatgtttggaagcta caacaaatttagtaataatgtttatggcgatgccatgcttattgccgtcatggatgtagtcaccagtctgatagctgggt ttgttatttttactacatttggaggtatggccaagaaactgggaatggaggtcaaggatgtggcaaaagcaggttacgga ttggcctttgttgcttatccggaggctttatcacaacttcctgttccacagctttggtccgtcctgttcttcttcatgct gttcactcttggactggatagtgagtttgcattactggagactattctcacatgtatacaggacgagtttcccaagacga ggaaatacaagagctacatgtgtgtcggttttgggatagtctgtttctttttggcgcttccatgtgtcactccggccggt gattacgttgtgactataatggaccattttggagctgacttttcagtgctgtttgtagcaacatgtgaatgtatggcagt catgtgggtctatggtgcacgtcgttttgtgagggacgttgagtacatgttgggccgtccaccacgtcctgttttctatt ggttgttctgttgggttttctgctcacctatactcatagggcttctcttcctgtatcgtatgattgcttacaagtccccg gagataagtaaaggagtaccatacccagtgtatggccaggtgattggctgggtgctaacagtcatagtgatgagtccgat tccagcaatcttcctttataaattagctaaagcaaagggatctctcatggagcgattaaagacaataactaccccaactc cagcctggggccctaatgatggcagcgacaaaagaactctctacaatgaaaatctacaagacacaaaattcggtattgat aatccagcgtcgcccaaatactga |
|
Protein
| Protein ID | pfu_aug2.0_1480.1_01655.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1480.1_01655.t1 MEGKYKFKSDKQLGHDTNGSVTVVNGDGREEEEDRGQWGSKWEFILSCVGLSVGLGNVWRFPYLAYDNGGAAFVIAYLIL QFLIGKPMYFMELVMGQYSGKGPTAVWNMNPSAKAAFVIAYLILQFLIGKPMYFMELVMGQYSGKGPTAVWNMNPSAKGI GVSMALISLIVAIYYNVIMAYTLFYFFSSMQTNLPWMQCKDEWYQYGCVEKTTPNIPYCSFNMSVNYEKFNDTACRCFEN STFHMSSYLDPLGFNCTNTTWKGDEPVAVAQLFFDKAVIEKAPTLKIDEMGAPLWKLSLCLLLSWIVVVCCLIRGVKSSG KVWVAAAGQMFFSLSVSFGGIIMFGSYNKFSNNVYGDAMLIAVMDVVTSLIAGFVIFTTFGGMAKKLGMEVKDVAKAGYG LAFVAYPEALSQLPVPQLWSVLFFFMLFTLGLDSEFALLETILTCIQDEFPKTRKYKSYMCVGFGIVCFFLALPCVTPAG DYVVTIMDHFGADFSVLFVATCECMAVMWVYGARRFVRDVEYMLGRPPRPVFYWLFCWVFCSPILIGLLFLYRMIAYKSP EISKGVPYPVYGQVIGWVLTVIVMSPIPAIFLYKLAKAKGSLMERLKTITTPTPAWGPNDGSDKRTLYNENLQDTKFGID NPASPKY |
|