Gene
| Gene Model ID | pfu_aug2.0_1480.1_01656 |
|---|---|
| Locus | scaffold1480.1 : 56566 ... 70569 : + |
| To GenomeBrowser | scaffold1480.1:56566..70569 |
| Genes list of scaffold | scaffold1480.1 |
| Synonym | pfu_aug1.0_169.1_50686 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1480.1_01656.t1 | 2 | 1 | NACHT | 182 | 222 | 5.6e-12 | 45.6 | 1.2 | 2000.0 | -1.8 |
| pfu_aug2.0_1480.1_01656.t1 | 1 | 1 | AAA_22 | 286 | 408 | 3.4e-07 | 30.4 | 9.1e-10 | 1.5e-06 | 28.3 |
| pfu_aug2.0_1480.1_01656.t1 | 2 | 2 | NACHT | 289 | 441 | 5.6e-12 | 45.6 | 1.2e-14 | 1.9e-11 | 43.8 |
Transcript
| Transcript ID | pfu_aug2.0_1480.1_01656.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1480.1_01656.t1 atgatggttcgaactgtcgtagatcctaatagcttagaagagatgacaagaaaagaggtggaggacatcttattagctac atatgagaaattagtatgcagattaggagagtctaacaaagacgtgaaaggcttactgaaaagatatcaagacttagatt ccttatcaaataaattccttgacatttggcacaaaggcaaatcttgcagatgcagaaaagtatttggaaagaggttgctc ctagcaaatgtagaatcaggtgcaaatatacttgaacgagacaagaaaaaattcgataaattcaaaaaaagggttccaca attattggttattttgacggaatgtgcaaatactatacggcatatgtacaacgaatgtggagctactccagtatccgttg agcaatcttcagttctttcctactggatatttgacagcattatcaacctagacaaattatggagaaagtacaaagagggc ggtttacatgacgatttacaggagtgctttaacacgaaggaggcgttaagtctgttcgaagtaaacaggatatccctatg cataacaatacaggagaaggattatttaaagtacagacagatattagcgcaaaacatcttggcattgaaaaatatgctgt ttgaaagaaatcatcgactttcgcggacacgccagattcattcttatctcatccagtcgccagatacactggacacagaa acctcgaagaagcctattgaaaagctcttgttttcaccattgtctctcggggaatacgaagaaccggtgcttttgttgag gcatactcgggcaacggcagaccgaacagatgattttttacgttttccgggggatacctgttcgtgcgtctttatccttg gagaagccggttgtgggaagacaacatactgcttaaagcttttacatcaatggtgtgaggcacagcaaatgaagaaagaa gaggtaactgagctaggaaagtttaattatgtgttttacgttacttcattagcgttaccgaagtcaaatgaatcattact agatttaatcatgaatagtaccttcggaaaacaagatttatatcaacaagaggcattttctgtgctaacacattccactg aaaaatgtctcattttgattgatgatgcccaaattttgaagtatctaaattgcgacattgctgacgaattagataataca ttttcaaattgtgtttttgtcttgaccatgagacctacacattttctaaatacattctcccaagacactttacacagaat gaatattagggttctgcatttgacgggagtagatgaaagtgcgataccatcgctgtatggtgatcaaatgatctcatatt caagaagcaaaaaagatagtggaggcttgatttatcgacaggaagaaactaaaaaactcgttacatttacagaatctgaa cagagaaaacagaaatcagatcctggacagaaaattcaggaatcggattctgacagaagaatgcaagaatcggttctcct aaagaaaatacaggaattggattctaaacagaaatcatatgaatcagatcctgaacggaaaatgcatgaaaccgaagtga aagaattacataaaacaatggaagctgagcaaacttacccacttcaaacctcaatacaattagatcctgaatatgaggtt gaggaatttcaacctcaagtgaaatcaaaacaaccaaaagaacgtttgaaagaaaattatgaatcaacaatgagaacacc aatttcgggcgatacttgtgtactaatgcttattgaggtgaaaccggtgtcaatgaaccgtacaggcttatatttaagtt ttattgatgaactcattcgtaggcatgaaatgtctttgcccgatgaggaagccgttccatttggtacggaacagctcgtt agattgcagtcatacaagagcatacaacgttatctgattgctcttcgtaatttaggaaatctggcacatcattgtttgct agatcatgaaacataccatgatagacttgagaaataccttgatgaggatacgctgacatttgctacaagatcttgtctac ttttcgtacacgagacatcaacaatggaagatgctgctgttctagagaaattccattttctacatgctgtcattcgggat tgtttagctgccatatatgtgacatcggacaaggatacattcaaatcattctgttcgaaattgaacagtttcgatgtcat ctcagatctttcgaaagttatcatgatcatttgtggaataagtcaatacttcggctgtcgattatcaagtcgaattaaag aagtgattgataaggaagaaaattttatcatttataggaatgatcaaccaatttacgtagatccatctatcagagagttc tacaagcagcagctcagctggtacaatgagtttagcagtggtatggcagagactggtgctaaaacaaatttagattttca cgttacagacgtttatatagacgacgagagtggcgaggaagttttagatggaactgttaaactcctgtctgataagaagg ttagagtcatgtcgttgcatttagagtatgctcaagctgagggcggcataagtgaccaagtagtaaacgatttcttggca tacaatccatcgcttgtatcgcttctcatcagaggttcaggcatgaaacggtcaatagattccctatcgattcccacgtt gaaaagtttatatttagctgatgttcaaatcaaacgtaacaatgatgacgatgcacctccactgttcatgaatttaccaa aaatacaaaggcttcgtttgtgcagagtcggcctgaacaatagattgttaggactgacggctgatgagggcaagatgcct ttgctcaaaagtttggatatgagtaaagtgaacatgggcaatcaacctattgaacttgccaaggatatgaaaacattaga gaatatcaatttatacgaagttaagatgacagatcaaggctggatggcatttgccaaatcactcgtcataattccgcatc cctttcaagttctactcaatcagactgacattgatgcaaaattaaagaaaatgatccgctctgaccctatttttgctgta gaaagcgtcagtggtgcatcctttgccttcacaaaacgtacatttgcacaatacattagaatatgtgcacgactcggctt gacaatggaaagaatgacatga |
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Protein
| Protein ID | pfu_aug2.0_1480.1_01656.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1480.1_01656.t1 MMVRTVVDPNSLEEMTRKEVEDILLATYEKLVCRLGESNKDVKGLLKRYQDLDSLSNKFLDIWHKGKSCRCRKVFGKRLL LANVESGANILERDKKKFDKFKKRVPQLLVILTECANTIRHMYNECGATPVSVEQSSVLSYWIFDSIINLDKLWRKYKEG GLHDDLQECFNTKEALSLFEVNRISLCITIQEKDYLKYRQILAQNILALKNMLFERNHRLSRTRQIHSYLIQSPDTLDTE TSKKPIEKLLFSPLSLGEYEEPVLLLRHTRATADRTDDFLRFPGDTCSCVFILGEAGCGKTTYCLKLLHQWCEAQQMKKE EVTELGKFNYVFYVTSLALPKSNESLLDLIMNSTFGKQDLYQQEAFSVLTHSTEKCLILIDDAQILKYLNCDIADELDNT FSNCVFVLTMRPTHFLNTFSQDTLHRMNIRVLHLTGVDESAIPSLYGDQMISYSRSKKDSGGLIYRQEETKKLVTFTESE QRKQKSDPGQKIQESDSDRRMQESVLLKKIQELDSKQKSYESDPERKMHETEVKELHKTMEAEQTYPLQTSIQLDPEYEV EEFQPQVKSKQPKERLKENYESTMRTPISGDTCVLMLIEVKPVSMNRTGLYLSFIDELIRRHEMSLPDEEAVPFGTEQLV RLQSYKSIQRYLIALRNLGNLAHHCLLDHETYHDRLEKYLDEDTLTFATRSCLLFVHETSTMEDAAVLEKFHFLHAVIRD CLAAIYVTSDKDTFKSFCSKLNSFDVISDLSKVIMIICGISQYFGCRLSSRIKEVIDKEENFIIYRNDQPIYVDPSIREF YKQQLSWYNEFSSGMAETGAKTNLDFHVTDVYIDDESGEEVLDGTVKLLSDKKVRVMSLHLEYAQAEGGISDQVVNDFLA YNPSLVSLLIRGSGMKRSIDSLSIPTLKSLYLADVQIKRNNDDDAPPLFMNLPKIQRLRLCRVGLNNRLLGLTADEGKMP LLKSLDMSKVNMGNQPIELAKDMKTLENINLYEVKMTDQGWMAFAKSLVIIPHPFQVLLNQTDIDAKLKKMIRSDPIFAV ESVSGASFAFTKRTFAQYIRICARLGLTMERMT |
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