Gene
| Gene Model ID | pfu_aug2.0_1480.1_01659 |
|---|---|
| Locus | scaffold1480.1 : 117749 ... 137145 : - |
| To GenomeBrowser | scaffold1480.1:117749..137145 |
| Genes list of scaffold | scaffold1480.1 |
| Synonym | pfu_aug1.0_18889.1_61868 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1480.1_01659.t1 | 3 | 1 | Lectin_C | 25 | 143 | 3.7e-08 | 33.9 | 9.7e-08 | 0.00048 | 20.7 |
| pfu_aug2.0_1480.1_01659.t1 | 3 | 2 | Lectin_C | 178 | 195 | 3.7e-08 | 33.9 | 0.11 | 550.0 | 1.2 |
| pfu_aug2.0_1480.1_01659.t1 | 3 | 3 | Lectin_C | 203 | 241 | 3.7e-08 | 33.9 | 5.8e-05 | 0.29 | 11.8 |
Transcript
| Transcript ID | pfu_aug2.0_1480.1_01659.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1480.1_01659.t1 atggcctcctgtccgtccaattcaatatttgacccaaatcgacatctatgttattggccatcaagtgacagacaaagttt ccaggagcatgaagtatactgtgaaggtgacaatggaattgtcatcacaatagacagcaatcagacggaaacttttataa atgagaccataccatgggatatatggttcgctcacgatcacgaaccaaactatgatatattcattggacgaatagatgtg ttcaggaataaacatttttaccagctggaatccatacctttggtaanggtaagtgagaccatacatttggatcacacatt gttctccaacattacatcgaatcaagatcccctggactgttgtatactagatggatcagggcttccaaggatggatgact gcaacaacatgcataaggctatctgtagcattgatgcaagctcacaaagcgactgtccaactcaagggaaattttatgac tatagatgttattggcctttaacgacaccggattccgcagagaatcaactagtatcttgtagtaatgactctggaacctt agcaatttttcataacttaagcaccatagatcaaacctttgcgccttgggcacagaacgagcctggtgatattactacac agcgttgtgtggaacgatggagtaaagatggattttggaatgatttgacgtgtattgaatcaaaattgtcgatttgtcaa aagcgaggaacaatgccagaaacaacaactgaattgagtatcccatccactggttcagaaacatcaacagaaagtacaac tgaaataaacacattaaagaccagtacagggacaatgacagaaacaaccactgaattaagtaccctatccactggttcag gaacaataccagaaacaacaactgaattaagtaccctatccactggttcaggaacaatgccaaaaacaacaactgaattg agtaccccatccactggttcagtatacggaaagtatactgaaactgacaaagtctga |
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Protein
| Protein ID | pfu_aug2.0_1480.1_01659.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1480.1_01659.t1 MASCPSNSIFDPNRHLCYWPSSDRQSFQEHEVYCEGDNGIVITIDSNQTETFINETIPWDIWFAHDHEPNYDIFIGRIDV FRNKHFYQLESIPLVXVSETIHLDHTLFSNITSNQDPLDCCILDGSGLPRMDDCNNMHKAICSIDASSQSDCPTQGKFYD YRCYWPLTTPDSAENQLVSCSNDSGTLAIFHNLSTIDQTFAPWAQNEPGDITTQRCVERWSKDGFWNDLTCIESKLSICQ KRGTMPETTTELSIPSTGSETSTESTTEINTLKTSTGTMTETTTELSTLSTGSGTIPETTTELSTLSTGSGTMPKTTTEL STPSTGSVYGKYTETDKV |
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