Gene
| Gene Model ID | pfu_aug2.0_14890.1_03192 |
|---|---|
| Locus | scaffold14890.1 : 20 ... 2548 : + |
| To GenomeBrowser | scaffold14890.1:20..2548 |
| Genes list of scaffold | scaffold14890.1 |
| Synonym | pfu_aug1.0_811.1_58266 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14890.1_03192.t1 | 1 | 1 | BTB | 8 | 69 | 1.6e-08 | 34.5 | 5.5e-12 | 4.1e-08 | 33.1 |
| pfu_aug2.0_14890.1_03192.t1 | 2 | 1 | BACK | 49 | 70 | 3.4e-06 | 26.8 | 0.17 | 1300.0 | -0.7 |
| pfu_aug2.0_14890.1_03192.t1 | 2 | 2 | BACK | 75 | 144 | 3.4e-06 | 26.8 | 1.6e-09 | 1.2e-05 | 25.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14890.1_03192.t1 | gi|676484363|ref|XP_009063322.1| | hypothetical protein LOTGIDRAFT_195500, partial [Lottia gigantea] | 2.0e-27 |
| pfu_aug2.0_14890.1_03192.t1 | gi|662200047|ref|XP_008473216.1| | PREDICTED: kelch-like protein diablo [Diaphorina citri] | 3.0e-15 |
| pfu_aug2.0_14890.1_03192.t1 | gi|193676261|ref|XP_001947036.1| | PREDICTED: ring canal kelch homolog [Acyrthosiphon pisum] | 3.0e-15 |
| pfu_aug2.0_14890.1_03192.t1 | gi|524895194|ref|XP_005104082.1| | PREDICTED: uncharacterized protein LOC101849073 [Aplysia californica] | 3.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_14890.1_03192.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14890.1_03192.t1 atgaataacagatactataatgaaccaggattatacgaacacagactgccaggtctagagggagatgccgtcaaacagat tgtcgaatttttctacacgtcggcagtttccgtggatgaggagagcgtttggacgttacttcctgctgccagtaaattgc atgtggcagaaattcaaaatctttgtacggaattcttattagcaaatttacaaatagaaaactgcctcaatattcacaag cttgccacagagtgcttatcgtcaaatttgctcaaggagagtacagattacattaaggacaattttgaaaagctcttaga ggaggacagtttcttagatttagaatttgaggatgccatgcctcatctcaagagacttggtgacacaggacttacgaacg gtcaacttctacaagcgatcaagtgctggataatagccgcagtggatgagagacaaatatatggatacaag |
|
Protein
| Protein ID | pfu_aug2.0_14890.1_03192.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14890.1_03192.t1 MNNRYYNEPGLYEHRLPGLEGDAVKQIVEFFYTSAVSVDEESVWTLLPAASKLHVAEIQNLCTEFLLANLQIENCLNIHK LATECLSSNLLKESTDYIKDNFEKLLEEDSFLDLEFEDAMPHLKRLGDTGLTNGQLLQAIKCWIIAAVDERQIYGYK |
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