Gene
| Gene Model ID | pfu_aug2.0_149.1_30289 |
|---|---|
| Locus | scaffold149.1 : 57619 ... 158065 : - |
| To GenomeBrowser | scaffold149.1:57619..158065 |
| Genes list of scaffold | scaffold149.1 |
| Synonym | pfu_aug1.0_1111.1_15349 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_149.1_30289.t1 | 13 | 1 | fn3 | 101 | 157 | 0.0 | 186.7 | 6.0e-05 | 0.22 | 11.6 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 2 | fn3 | 189 | 245 | 0.0 | 186.7 | 2.7e-05 | 0.1 | 12.7 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 3 | fn3 | 277 | 335 | 0.0 | 186.7 | 4.8e-06 | 0.018 | 15.1 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 4 | fn3 | 395 | 418 | 0.0 | 186.7 | 0.0029 | 11.0 | 6.2 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 5 | fn3 | 732 | 745 | 0.0 | 186.7 | 2.4 | 8900.0 | -3.1 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 6 | fn3 | 814 | 839 | 0.0 | 186.7 | 0.0059 | 22.0 | 5.2 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 7 | fn3 | 864 | 920 | 0.0 | 186.7 | 0.22 | 830.0 | 0.2 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 8 | fn3 | 951 | 1021 | 0.0 | 186.7 | 1.1e-05 | 0.041 | 14.0 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 9 | fn3 | 1049 | 1123 | 0.0 | 186.7 | 1.3e-14 | 4.6e-11 | 42.6 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 10 | fn3 | 1143 | 1238 | 0.0 | 186.7 | 7.4e-09 | 2.8e-05 | 24.1 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 11 | fn3 | 1252 | 1325 | 0.0 | 186.7 | 2.3e-12 | 8.5e-09 | 35.4 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 12 | fn3 | 1353 | 1426 | 0.0 | 186.7 | 2.9e-07 | 0.0011 | 19.0 |
| pfu_aug2.0_149.1_30289.t1 | 13 | 13 | fn3 | 1488 | 1522 | 0.0 | 186.7 | 0.00017 | 0.64 | 10.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_149.1_30289.t1 | gi|348580375|ref|XP_003475954.1| | PREDICTED: LOW QUALITY PROTEIN: phosphatidylinositol phosphatase PTPRQ [Cavia porcellus] | 9.0e-25 |
| pfu_aug2.0_149.1_30289.t1 | gi|704274881|ref|XP_010155269.1| | PREDICTED: fibronectin-like, partial [Eurypyga helias] | 1.0e-24 |
| pfu_aug2.0_149.1_30289.t1 | gi|12621078|ref|NP_075214.1| | phosphatidylinositol phosphatase PTPRQ precursor [Rattus norvegicus] | 6.0e-24 |
| pfu_aug2.0_149.1_30289.t1 | gi|733869238|ref|XP_010706799.1| | PREDICTED: phosphatidylinositol phosphatase PTPRQ [Meleagris gallopavo] | 2.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_149.1_30289.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_149.1_30289.t1 atgtatcagttaaagcctattttaagaaattctggaaaaaacagtgctatgagttatattgacttttactatgctagaag aaataaagacagcatacgaacaacgtttataccggaagaacaaccattagaaaccaggcatatcaataaaactatttcaa caaactctacaacccaaagtcgtgtgtcaccaatgacaacaaccacaaaaacaacggaaggaacaacaacaacagcaatt aaagcaacgacaatgaattatccaacgaatcctgattgctcatcatttcataccatgatatcgacgaattcaatcgtttt caatatcagcaaagcaatacaaaacttacggtatagaataactgtcaaatcatccgaaggagatccgatgacacaacata tgaacaagagtcctttgacatttagtaaattacaacctggaagtacattcacgtataccatatttactctaggagatgga aaccgcacaagcaaagaaaactgttcgaaggaagtatatacctatccaacgaatcctaattgctcagcatttcataccat gacatcgacgaactcaatcgttttcaatatcagcaaagcaatacaaaacttacattatagagtaaccgtcaaatcaagag taggagatccgatggtacaaaatatgaacaagagtcttttgacatttagtaaattacaacctggaagtacatacacgtat accatattcactctaggaaaaggaaaccgcacaagcaaagagatgtgttcgagggaagtatatacctatccaacgaatcc taactgctcagcatttcataccataatatcgacgaactcaatcgttttcaatatcagcaaagcaatacaaaacttacagt atagaataactgtcaaatcatcagaaggagatccgatggtacaaaatatgaacaagagtattttgacattcagaaaactt caacctggaagtacatacacgtataccatatatactctaggagatggaaaccgcacaagcaaagagaagtgttcgaggga agtatatacctaaccacatggacctgaaggatgcgagaagaatttttcagtaacagatgtcatgtccagtgagatgatct tatcattgccatcttcattgaaatacgactatttactcacaattgataacagacgtctattagttcacaaagaagcagac acgttcaatgtgacgggccttaatcctgatcaagagtacagaatatttcttcaacatgtatttaaagctgacaatgggtt gaatataacgagcacggaaaaatgtcaagtcactaattggacacataagactttggtgagtaagagcgatacagatttgg tagaacattttgaggaaccggcgatgaaacgtcgtttgtacggattattatgcattttaggtatgcagtataagtatggt agatctaaatctaaattgttagtatcgaagccaaaggaagctagagctgatttgtggttatcttttatttcagaggcaga aaggtttattggggtagaagacgagtacaataagagacgaaaaagagacatacgacatagaaaaaataaacacaaaagac tacacataaaccaacgagaccaatgggcaaccggtgccgacttaggacggctatctgctatgcaggtttcaaatggagtt gttatcctagagtacgtgcgcacaaccctcccactataccgattacccagaggtccttatctaaactgtacacagatttc ttggttgtctagttatacaggaaaacaagcaacattcccgcgtaacagcaattataaatctgcagtattttcatcgtacg atgacaatggccacaatacaagcattgaacttcccttcaataaatatcttacatatgactttcaaatggaaagaggaatc agctacactttggaaatctacttctttggaacaggagggttgatgtcgaagccagaatgttacaaaaaaaatgctgttcg accaattgtaccacctggctgctcacatgctgttgttgtgcaagatgctaatcgtatagtgattgaaccaaggaatcttg aatacaacggcactggagcattgttttttagattgtcaatgcgtccaatagcctcgaaatctattggagacttggaaaaa gtatccttcctcagggcaccaattgtatatgaccatcttctacaaggacaggaatatacatttgagtttaagtctatcgg aaaagacgcttctgtttcaaaaagcctttgcacattgaaaaagtatacacgtccttcagatcctaactgttcagttgtta tttatgatgcaaaaaatgattccattttcgtcaatttaactggatacgtttcggtcggggcaaaatcatacgatctaata cttaaacgagggaacgccattttgcataatataacatcaacgatggatgtccaactcacaaacttggaaataggggaaag ttatattctaaccgtggctgctgttggacctggaggtttaagaagcagcaacagttgtcaaaaaactgtatacacaagac cgatggggccatcttgtaatgtcacactggacgttaatgaaacatctgttgatattgaattcaatgatgattttccaaaa ggcgcttccggctacatactcagcgtagatccaatttcattaaactttcataaaacaaatttggatgcacatgttatctt cgttccgggacttacgtcaggaaaccactacaatcttagttggaagagctacggaactgacaatttaacaagtacagaac gatgtttttcagagttttttgcaaagccaagtcgaccaaccaaacaaaggatttcagtgacaaattcttcaatctcgtta tcctggagtataaacggtactgctgacaattacactgttatttcccattgtatatgttcctctaattgcaattacaaagt acgtgacatggaaaatggcgtagtgggaactacaagtgctgacatcgttggattagtaccaggatcatactgcaatgtta ccattacttcaaactccggtgataaaagcagcgacccattaagtatactggatatttccaccaacgaggaagtacccgga cctgtcaagaatatctcacttttgataacatctagaactgttagaatcaactggaatgttcccgagaagccaaacggaga gattctaaactactcagtttcattgtatttgagccaaagtcaacaaaatatagaacatgaatatgttcttcaagaggatg aactgactgtctctttcgaacatcttactcctggcacatgctacacaatatatatagctgctgctactgaatctggatat ggagaaacaactacgtcaaatatatatacagttgaggaagtaccaagtaatgtcagaaacatcgctatcaatacaagtgt gaaatatgcggatattgtgttcaatcatccaaaagatccaaacggtattattacaagatatgaaatcgaatgcattccag acaacactacaaaggactgttacaagtcaaacggtgcatttgaagaaatcattaagctcaaaacagtgaacatcacagaa agggaaaaacttgatgaaatccctgtttcgtgtcgcattgaaaatctttatccattttggaattataagattcgagtaag aggttttacatatgctggtcatggaaattggagcatgtctatgccaatacgtacgaagccatccaaaccaggtccaattg aaaacattaaggtaacagacgtcacaagcagcagcgtatcactggtatgggatccaccttgctttacaaatggaatcatc atgcgatatcatattatgacaacaccgtatggcaacaattctaaatctacgagtggaaacgaaacaatgatcaaaataaa caaccttctgccttttcaaaactatacttttaaaacaaaagctgaaacaattggtggaggaaataatacaggaattgatt cacctgtcatacaaactctctgtgcaaagccatatccagcagcagatctcaaagaagtaacgaaaacttcaaattcagta acattaatatggcagaagccggacctacgaacttgtctcacaaattatacggtaacggcaacagatacgaagaactctag tttaaaacaatcttgttcgacagcagggtttgatcataccaactgtaccattacaagtttggacgagttctgggaatatc acattgttttgcggtcaaaaaccgtaaatggtagcacagaagctagtaaaaagatagtcattagaacgaatgaagcagat atcataaagcttgatcgtagcagctttttagatgtgttgcaaaactcggctcttcatttttgtaaaacggacaagctatc gtcaacaacttctccaggaagagtaacaaagcttcaagttgcacctcaaagtaatgttacgctgagccgatccatgaccg ttagatggggtcaaccatcggaacgtgataaaaatggaataatcaagttctactatattgcttaccatgataaaggtggc atcgaaaatggcattttaagagtgggaaatactacatttgaaaaaaagatacccgttgtcggtgcaccaattttcaactt tcaaacaaaagatgacttcaaaatcgaaacatccacacaacagccattacaggatgacgagaaacaattgttggttggac ttccagtttctaaaatttgtgacaataagaacggaaaaattattgaaagaggaattattgtgtctgacgtaaaaagtatt agcgggaaagttgataatttctttggcgagagatcattctacgagagcatcaaagacaaaaattatagaacatggcaaga tgtccacacaatggacaacatgccaccatatattgcaacaacaaatttgaataagttttgtggaacagaaccaaacaatg ttccaattatagcaggaggtatttctggtggcatggtggggatcattattattgttgttatcattgtcgtagtgactctg agacgtagaaggttgaataaagagagtgaaagatctgctggagaggacaattttgcatttgatggacaacccatgaaaca tttgaagaaaacgtcaaagacagtgtgttccgatcaaatgcttaaccgttag |
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Protein
| Protein ID | pfu_aug2.0_149.1_30289.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_149.1_30289.t1 MYQLKPILRNSGKNSAMSYIDFYYARRNKDSIRTTFIPEEQPLETRHINKTISTNSTTQSRVSPMTTTTKTTEGTTTTAI KATTMNYPTNPDCSSFHTMISTNSIVFNISKAIQNLRYRITVKSSEGDPMTQHMNKSPLTFSKLQPGSTFTYTIFTLGDG NRTSKENCSKEVYTYPTNPNCSAFHTMTSTNSIVFNISKAIQNLHYRVTVKSRVGDPMVQNMNKSLLTFSKLQPGSTYTY TIFTLGKGNRTSKEMCSREVYTYPTNPNCSAFHTIISTNSIVFNISKAIQNLQYRITVKSSEGDPMVQNMNKSILTFRKL QPGSTYTYTIYTLGDGNRTSKEKCSREVYTXPHGPEGCEKNFSVTDVMSSEMILSLPSSLKYDYLLTIDNRRLLVHKEAD TFNVTGLNPDQEYRIFLQHVFKADNGLNITSTEKCQVTNWTHKTLVSKSDTDLVEHFEEPAMKRRLYGLLCILGMQYKYG RSKSKLLVSKPKEARADLWLSFISEAERFIGVEDEYNKRRKRDIRHRKNKHKRLHINQRDQWATGADLGRLSAMQVSNGV VILEYVRTTLPLYRLPRGPYLNCTQISWLSSYTGKQATFPRNSNYKSAVFSSYDDNGHNTSIELPFNKYLTYDFQMERGI SYTLEIYFFGTGGLMSKPECYKKNAVRPIVPPGCSHAVVVQDANRIVIEPRNLEYNGTGALFFRLSMRPIASKSIGDLEK VSFLRAPIVYDHLLQGQEYTFEFKSIGKDASVSKSLCTLKKYTRPSDPNCSVVIYDAKNDSIFVNLTGYVSVGAKSYDLI LKRGNAILHNITSTMDVQLTNLEIGESYILTVAAVGPGGLRSSNSCQKTVYTRPMGPSCNVTLDVNETSVDIEFNDDFPK GASGYILSVDPISLNFHKTNLDAHVIFVPGLTSGNHYNLSWKSYGTDNLTSTERCFSEFFAKPSRPTKQRISVTNSSISL SWSINGTADNYTVISHCICSSNCNYKVRDMENGVVGTTSADIVGLVPGSYCNVTITSNSGDKSSDPLSILDISTNEEVPG PVKNISLLITSRTVRINWNVPEKPNGEILNYSVSLYLSQSQQNIEHEYVLQEDELTVSFEHLTPGTCYTIYIAAATESGY GETTTSNIYTVEEVPSNVRNIAINTSVKYADIVFNHPKDPNGIITRYEIECIPDNTTKDCYKSNGAFEEIIKLKTVNITE REKLDEIPVSCRIENLYPFWNYKIRVRGFTYAGHGNWSMSMPIRTKPSKPGPIENIKVTDVTSSSVSLVWDPPCFTNGII MRYHIMTTPYGNNSKSTSGNETMIKINNLLPFQNYTFKTKAETIGGGNNTGIDSPVIQTLCAKPYPAADLKEVTKTSNSV TLIWQKPDLRTCLTNYTVTATDTKNSSLKQSCSTAGFDHTNCTITSLDEFWEYHIVLRSKTVNGSTEASKKIVIRTNEAD IIKLDRSSFLDVLQNSALHFCKTDKLSSTTSPGRVTKLQVAPQSNVTLSRSMTVRWGQPSERDKNGIIKFYYIAYHDKGG IENGILRVGNTTFEKKIPVVGAPIFNFQTKDDFKIETSTQQPLQDDEKQLLVGLPVSKICDNKNGKIIERGIIVSDVKSI SGKVDNFFGERSFYESIKDKNYRTWQDVHTMDNMPPYIATTNLNKFCGTEPNNVPIIAGGISGGMVGIIIIVVIIVVVTL RRRRLNKESERSAGEDNFAFDGQPMKHLKKTSKTVCSDQMLNR |
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