Gene
| Gene Model ID | pfu_aug2.0_149.1_30296 |
|---|---|
| Locus | scaffold149.1 : 371207 ... 376680 : + |
| To GenomeBrowser | scaffold149.1:371207..376680 |
| Genes list of scaffold | scaffold149.1 |
| Synonym | pfu_aug1.0_15042.1_39662 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_149.1_30296.t1 | 8 | 1 | LRR_4 | 21 | 62 | 2.0e-37 | 126.2 | 3.9e-07 | 0.00082 | 18.9 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 1 | LRR_8 | 22 | 75 | 6.8e-14 | 51.3 | 8.2e-06 | 0.017 | 14.8 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 1 | LRR_1 | 23 | 42 | 1.8e-08 | 33.2 | 0.046 | 97.0 | 3.6 |
| pfu_aug2.0_149.1_30296.t1 | 5 | 1 | LRR_9 | 25 | 92 | 3.1e-22 | 78.9 | 6.3e-06 | 0.013 | 15.0 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 1 | LRR_6 | 39 | 57 | 4.8e-06 | 26.0 | 0.34 | 730.0 | 0.8 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 2 | LRR_1 | 44 | 63 | 1.8e-08 | 33.2 | 0.18 | 380.0 | 1.8 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 2 | LRR_8 | 51 | 98 | 6.8e-14 | 51.3 | 0.00018 | 0.39 | 10.5 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 2 | LRR_6 | 64 | 83 | 4.8e-06 | 26.0 | 0.0044 | 9.2 | 6.6 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 2 | LRR_4 | 65 | 102 | 2.0e-37 | 126.2 | 2.1e-08 | 4.5e-05 | 22.9 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 3 | LRR_1 | 66 | 85 | 1.8e-08 | 33.2 | 0.021 | 44.0 | 4.6 |
| pfu_aug2.0_149.1_30296.t1 | 5 | 2 | LRR_9 | 68 | 136 | 3.1e-22 | 78.9 | 3.8e-06 | 0.008 | 15.7 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 3 | LRR_8 | 84 | 123 | 6.8e-14 | 51.3 | 0.00018 | 0.38 | 10.5 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 4 | LRR_1 | 88 | 105 | 1.8e-08 | 33.2 | 1.3 | 2700.0 | -0.8 |
| pfu_aug2.0_149.1_30296.t1 | 5 | 3 | LRR_9 | 106 | 199 | 3.1e-22 | 78.9 | 1.5e-09 | 3.1e-06 | 26.8 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 3 | LRR_4 | 112 | 149 | 2.0e-37 | 126.2 | 1.3e-11 | 2.7e-08 | 33.2 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 3 | LRR_6 | 112 | 127 | 4.8e-06 | 26.0 | 0.018 | 38.0 | 4.7 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 4 | LRR_8 | 113 | 169 | 6.8e-14 | 51.3 | 1.9e-08 | 4.1e-05 | 23.2 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 5 | LRR_1 | 113 | 130 | 1.8e-08 | 33.2 | 0.004 | 8.5 | 6.8 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 4 | LRR_6 | 133 | 147 | 4.8e-06 | 26.0 | 0.012 | 25.0 | 5.3 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 6 | LRR_1 | 134 | 151 | 1.8e-08 | 33.2 | 0.011 | 22.0 | 5.5 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 4 | LRR_4 | 157 | 172 | 2.0e-37 | 126.2 | 0.0015 | 3.3 | 7.4 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 5 | LRR_6 | 157 | 170 | 4.8e-06 | 26.0 | 0.06 | 130.0 | 3.1 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 7 | LRR_1 | 159 | 182 | 1.8e-08 | 33.2 | 0.029 | 61.0 | 4.2 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 6 | LRR_6 | 185 | 192 | 4.8e-06 | 26.0 | 7.0 | 15000.0 | -3.3 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 5 | LRR_8 | 198 | 235 | 6.8e-14 | 51.3 | 0.0013 | 2.7 | 7.8 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 7 | LRR_6 | 201 | 220 | 4.8e-06 | 26.0 | 0.0044 | 9.2 | 6.6 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 5 | LRR_4 | 202 | 239 | 2.0e-37 | 126.2 | 2.0e-08 | 4.3e-05 | 23.0 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 8 | LRR_1 | 203 | 222 | 1.8e-08 | 33.2 | 0.021 | 44.0 | 4.6 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 9 | LRR_1 | 225 | 242 | 1.8e-08 | 33.2 | 1.3 | 2700.0 | -0.8 |
| pfu_aug2.0_149.1_30296.t1 | 5 | 4 | LRR_9 | 234 | 348 | 3.1e-22 | 78.9 | 7.2e-12 | 1.5e-08 | 34.3 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 6 | LRR_4 | 249 | 286 | 2.0e-37 | 126.2 | 1.1e-11 | 2.4e-08 | 33.4 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 8 | LRR_6 | 249 | 264 | 4.8e-06 | 26.0 | 0.018 | 38.0 | 4.7 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 6 | LRR_8 | 250 | 306 | 6.8e-14 | 51.3 | 2.1e-08 | 4.6e-05 | 23.1 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 10 | LRR_1 | 250 | 267 | 1.8e-08 | 33.2 | 0.004 | 8.5 | 6.8 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 9 | LRR_6 | 270 | 284 | 4.8e-06 | 26.0 | 0.012 | 25.0 | 5.3 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 11 | LRR_1 | 271 | 288 | 1.8e-08 | 33.2 | 0.011 | 22.0 | 5.5 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 7 | LRR_4 | 292 | 309 | 2.0e-37 | 126.2 | 0.0015 | 3.2 | 7.4 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 10 | LRR_6 | 294 | 307 | 4.8e-06 | 26.0 | 0.06 | 130.0 | 3.1 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 12 | LRR_1 | 296 | 319 | 1.8e-08 | 33.2 | 0.029 | 61.0 | 4.2 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 7 | LRR_8 | 321 | 329 | 6.8e-14 | 51.3 | 1.6 | 3500.0 | -2.2 |
| pfu_aug2.0_149.1_30296.t1 | 11 | 11 | LRR_6 | 322 | 329 | 4.8e-06 | 26.0 | 4.8 | 10000.0 | -2.8 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 8 | LRR_4 | 361 | 378 | 2.0e-37 | 126.2 | 0.69 | 1500.0 | -1.1 |
| pfu_aug2.0_149.1_30296.t1 | 5 | 5 | LRR_9 | 364 | 396 | 3.1e-22 | 78.9 | 1.1 | 2300.0 | -2.1 |
| pfu_aug2.0_149.1_30296.t1 | 8 | 8 | LRR_8 | 367 | 394 | 6.8e-14 | 51.3 | 0.28 | 600.0 | 0.2 |
| pfu_aug2.0_149.1_30296.t1 | 13 | 13 | LRR_1 | 367 | 373 | 1.8e-08 | 33.2 | 3.5 | 7400.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_149.1_30296.t1 | gi|676486174|ref|XP_009063893.1| | hypothetical protein LOTGIDRAFT_155146 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_149.1_30296.t1 | gi|260803986|ref|XP_002596870.1| | hypothetical protein BRAFLDRAFT_99772 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_149.1_30296.t1 | gi|524883445|ref|XP_005098353.1| | PREDICTED: leucine-rich repeat-containing protein 9-like isoform X2 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_149.1_30296.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_149.1_30296.t1 atggagaggtacagcaggttacggccagagaaagtcggagacaatgacaaccattggtacacaaaggtgacttcactgaa cttagatggtcagcacatcaccaagctgtcagggttagagaagctggacaatctaaagtatgcttccttcaacaacaatg acatcacaaagctagagggacttgatcattgtacaaagatcgaagaattatcagtggaaaataattgtatctcaaaacta gaaggaatttcaaaactgactcatttacggagatttagtgccggaaacaattacctggccacacttgaaggctcgggaat tcactgtctgacaatgttaacgtacctatcactggaaaataacctattgacttcattaggtggactacagaaaatgaatt ctctagtggaactttacgtagggaataataagatttctagtgttcgtgaagtgttttttctaaaggtgctgaccagcctg gtgatattggatctctatggtaaccctgttgcctcagaaactgacaactatcgtctcttcatcatatatcatctcaagaa cctcaaggccctggatggctcagctattggacttgatcattgtacaaagatcgaagaattatcagtggaaaataattgta tctcaaaactagaaggaatttcaaaactgactcatttacggagatttagtgccggaaacaattacctggccacacttgaa ggctcgggaattcactgtctgacaatgttaacgtacctatcactggaaaataacctattgacttcattaggtggactaca gaaaatgaattctctagtggaactttacgtagggaataataagatttctagtgttcgtgaagtgttttttctaaaggtgc tgaccagcctggtgatattggatctctatggtaaccctgttgcctcagaaactgacaactatcgtctcttcatcatatat catctcaagaacctcaaggccctggatggctcagctattgaggccatggaaggtaatcaggccaaggacacgtttggggg gaggctgaccccggacttcgtagccgagaaactaggtcactcaaacttccaagatgtccgagaactagatctacccaact ccagtgttagaatagtagatctgggtatgggagatgctttcattaatttgagaagggtcaattatctcagaccatggacc agcaaaaagtaa |
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Protein
| Protein ID | pfu_aug2.0_149.1_30296.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_149.1_30296.t1 MERYSRLRPEKVGDNDNHWYTKVTSLNLDGQHITKLSGLEKLDNLKYASFNNNDITKLEGLDHCTKIEELSVENNCISKL EGISKLTHLRRFSAGNNYLATLEGSGIHCLTMLTYLSLENNLLTSLGGLQKMNSLVELYVGNNKISSVREVFFLKVLTSL VILDLYGNPVASETDNYRLFIIYHLKNLKALDGSAIGLDHCTKIEELSVENNCISKLEGISKLTHLRRFSAGNNYLATLE GSGIHCLTMLTYLSLENNLLTSLGGLQKMNSLVELYVGNNKISSVREVFFLKVLTSLVILDLYGNPVASETDNYRLFIIY HLKNLKALDGSAIEAMEGNQAKDTFGGRLTPDFVAEKLGHSNFQDVRELDLPNSSVRIVDLGMGDAFINLRRVNYLRPWT SKK |
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