Gene
| Gene Model ID | pfu_aug2.0_149.1_30299 |
|---|---|
| Locus | scaffold149.1 : 387656 ... 401396 : - |
| To GenomeBrowser | scaffold149.1:387656..401396 |
| Genes list of scaffold | scaffold149.1 |
| Synonym | pfu_aug1.0_12204.1_61013 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_149.1_30299.t1 | 3 | 1 | zf-B_box | 15 | 57 | 3.5e-12 | 45.9 | 5.9e-08 | 0.00011 | 22.0 |
| pfu_aug2.0_149.1_30299.t1 | 3 | 2 | zf-B_box | 73 | 111 | 3.5e-12 | 45.9 | 2.3e-12 | 4.3e-09 | 36.1 |
| pfu_aug2.0_149.1_30299.t1 | 4 | 1 | NHL | 413 | 429 | 1.2e-06 | 28.1 | 0.0017 | 3.1 | 7.9 |
| pfu_aug2.0_149.1_30299.t1 | 3 | 3 | zf-B_box | 419 | 428 | 3.5e-12 | 45.9 | 3.7 | 6800.0 | -3.0 |
| pfu_aug2.0_149.1_30299.t1 | 4 | 2 | NHL | 477 | 486 | 1.2e-06 | 28.1 | 8.0 | 15000.0 | -3.8 |
| pfu_aug2.0_149.1_30299.t1 | 4 | 3 | NHL | 508 | 530 | 1.2e-06 | 28.1 | 2.2e-06 | 0.0041 | 17.0 |
| pfu_aug2.0_149.1_30299.t1 | 4 | 4 | NHL | 553 | 578 | 1.2e-06 | 28.1 | 0.0058 | 11.0 | 6.2 |
Transcript
| Transcript ID | pfu_aug2.0_149.1_30299.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_149.1_30299.t1 atgagtgataatgctgaagcctttcctacccagatagtggtgacctgtggtatatgtgatggaacaaaagacgttcaatg gttttgtaaatggtgtgcgggatctctttgcaacacatgcaaaatctcacatccaagaatctcattgttcaagaatcatg tcgttgtaccgcgcactcatgatatcatgcgactgtacgggccgtctaagattgccgagcagtgccccatccataatgat agggagattactacgtactgcaatcagtgtcaggtcccatgctgtgtcaaatgtcaagtagaaaaacacaaccgccatga tatttctaccatcgaggacaagtatctgtctgcagagaacaggcttaacgacaatgtaaaagagctacaaaaagatgtta tgccaaaactggaaaagatgggagaaaagattcagaaagactgctcagaaagaagagttaggattgaagaggttgataaa gaggtgaacacattcaggaaggaaatgaaggacgctgtcgatgaatcatgtgacggtcttttagaaaaacttcattcaaa agacaacaaattagataaacaaattatgaaagtagattcacagaaaagaaaagttagggaaatgataaaagagatagatg gaattatacaaaagggtaatttggatatgataaagtactccccgccttctcccaaaaccctaatccccattgtacctagc ccaaagctttgtattcctgtcttcatacctgggagtagactggtacccgttctggttccttcgtttacgctatgctactc agtaacagaccggtatcggaaaaaaatcagtagaggtataataataaccattatcagaagtaggacagggaccatagagt ggactgatgatccttctgaacaaaatgtttctccctccactacgtcagtatttgaccgttctttgatcaatatcgataag gtggacgtcatgtcctttcggagtgaaattgatatcacatccattacatcagtaggtaacaacaatgcctgggtcatgta ttgtgaaagtgaaaccatgtatctgtatacccgtagtggtaaagtggagagatctatcacaataaagggctgtggtggca ttgttgacatggcaataagacaggcaggcgaaatgatcattacttgcgatgatatgaaagtgagacatgtttcgttgaaa ggtaatgtgtccattctaattgacacaaaaccttttcatccttacggtatttgcttgtgtgatgatgacgagattgtcgt gtgtatgggtggtcagactaagaaacacttagctgtttattctgtatacactggtttgaagcaacgcgaaatattgggaa ttgactctcagggtaaccagaagatcacagatccgtactgtgttgaacgtaatggcagcgatatgtgtgtggtcaactgg ttaaatgtagtatgtgtggatgagaaagatacaataaggtgggtgtatgatggcaaacaggccaaactcaaagaggagtt ttctccgcgtggattatgtatagacaagttccacaatctgcttgtcactgatgtatacaataattgtgtacattacatag atagggatgggatgctattacagataatactaacaaaagaacaaactggggtacttggaccttggggaatcagtctagca gataacacgggtcaagtctggattggtactctaaacaaaaatgctgccatttggtgtgacagacatccaagtgtgacaga cagaccgcgaacggacaaagtgatccctaagtgtcgctatgctttgcacagctgcaacccagaaaggttttacagaagat ag |
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Protein
| Protein ID | pfu_aug2.0_149.1_30299.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_149.1_30299.t1 MSDNAEAFPTQIVVTCGICDGTKDVQWFCKWCAGSLCNTCKISHPRISLFKNHVVVPRTHDIMRLYGPSKIAEQCPIHND REITTYCNQCQVPCCVKCQVEKHNRHDISTIEDKYLSAENRLNDNVKELQKDVMPKLEKMGEKIQKDCSERRVRIEEVDK EVNTFRKEMKDAVDESCDGLLEKLHSKDNKLDKQIMKVDSQKRKVREMIKEIDGIIQKGNLDMIKYSPPSPKTLIPIVPS PKLCIPVFIPGSRLVPVLVPSFTLCYSVTDRYRKKISRGIIITIIRSRTGTIEWTDDPSEQNVSPSTTSVFDRSLINIDK VDVMSFRSEIDITSITSVGNNNAWVMYCESETMYLYTRSGKVERSITIKGCGGIVDMAIRQAGEMIITCDDMKVRHVSLK GNVSILIDTKPFHPYGICLCDDDEIVVCMGGQTKKHLAVYSVYTGLKQREILGIDSQGNQKITDPYCVERNGSDMCVVNW LNVVCVDEKDTIRWVYDGKQAKLKEEFSPRGLCIDKFHNLLVTDVYNNCVHYIDRDGMLLQIILTKEQTGVLGPWGISLA DNTGQVWIGTLNKNAAIWCDRHPSVTDRPRTDKVIPKCRYALHSCNPERFYRR |
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