Gene
| Gene Model ID | pfu_aug2.0_1491.1_05083 |
|---|---|
| Locus | scaffold1491.1 : 57516 ... 77605 : + |
| To GenomeBrowser | scaffold1491.1:57516..77605 |
| Genes list of scaffold | scaffold1491.1 |
| Synonym | pfu_aug1.0_16.1_07292 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1491.1_05083.t1 | 4 | 1 | Kinesin | 68 | 91 | 5.7e-39 | 133.7 | 3.0 | 15000.0 | -15.6 |
| pfu_aug2.0_1491.1_05083.t1 | 2 | 1 | PB1 | 214 | 288 | 1.3e-08 | 34.3 | 1.4e-11 | 6.8e-08 | 32.0 |
| pfu_aug2.0_1491.1_05083.t1 | 4 | 2 | Kinesin | 464 | 500 | 5.7e-39 | 133.7 | 0.27 | 1300.0 | -2.3 |
| pfu_aug2.0_1491.1_05083.t1 | 1 | 1 | ZZ | 537 | 569 | 1.1e-06 | 28.0 | 6.2e-10 | 3.1e-06 | 26.6 |
| pfu_aug2.0_1491.1_05083.t1 | 4 | 3 | Kinesin | 667 | 672 | 5.7e-39 | 133.7 | 0.58 | 2900.0 | -3.4 |
| pfu_aug2.0_1491.1_05083.t1 | 4 | 4 | Kinesin | 846 | 1049 | 5.7e-39 | 133.7 | 1.10002e-42 | 5.7e-39 | 133.7 |
| pfu_aug2.0_1491.1_05083.t1 | 2 | 2 | PB1 | 941 | 965 | 1.3e-08 | 34.3 | 0.59 | 2900.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1491.1_05083.t1 | gi|291233461|ref|XP_002736671.1| | PREDICTED: next to BRCA1 gene 1 protein-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1491.1_05083.t1 | gi|585675922|ref|XP_006818867.1| | PREDICTED: next to BRCA1 gene 1 protein-like isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1491.1_05083.t1 | gi|260783785|ref|XP_002586952.1| | hypothetical protein BRAFLDRAFT_128978 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1491.1_05083.t1 | gi|395532285|ref|XP_003768201.1| | 1.99993e-41 | |
| pfu_aug2.0_1491.1_05083.t1 | gi|632988247|ref|XP_007883003.1| | PREDICTED: next to BRCA1 gene 1 protein [Callorhinchus milii] | 4.00001e-41 |
Transcript
| Transcript ID | pfu_aug2.0_1491.1_05083.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1491.1_05083.t1 atgagagtcctatcactaaccattcaaaagttatgcccaatgttaaagtttttgaaaattaggtccaaggtcaaggtcan caacaacaacagcagtagtaacaacaaaaacaacaacaacagcagtaagactaacaacaaaaacaactacaacggcagta gtaacaacaaaaacaacaacaacagcagttgcaacaacaaaaacaacgacaacagcagtagctacaacaaaaacaacgac aacagcagtagctacaacaaaaacaacaacaacagcagtaggtacaacaaaaacaacagcagtagctacaacaaaacaac gacaacagcagtagcaacaacaaaaacaacaacaacagcagtagtaacaacaaaaacaacaacaacagcagtagtaacaa caaaaacaacaacaacggcagtagctacaacaaaaacaacaacaacggcagtagctacaacaaaaacaacgacaacagca gtagcaacaacgaaaacaacagcagcagtagcagtagcagtagcaacaaccgtagctgcatcaaaaacaacaacagcaac agcagcaactcaaacgcagcagaataaaatcactgtctcattctgtttgctcaagatggacgacatcatagctctgaacg ttacttttgaaggcgatggcgagagccctgaaatcttccgcctttattcgcgagtaccttggatcgactttgaggccatg ttgaaggcacagtatgattgtgatgacatacaagttttctacattgattcggatggtgactatatcacagtgagcagtga agaagaatacaaagaagcaaagaagctggcaaagcagtgctccaatacgcttcatatgaaagttcgaaatattggtccag acgctaatctttttgagcagaacgaggtccctagtcacgttcccattccccttccaaacggacccttcaaacattctgaa gagtctgaagttacagcgccccctagtgaacaccaagttgaaataccccctgaggagcctcagatagaaagagtcatagt ggtcccaccacaacaagacatcaacagaagtattgaaaacattgttattcaggttgacatggcaacaggagaaagaactg agataaagtgcaccactgggcatgatgttgaaatgactgaaaagaaagaatcctcaagtccaaaagacatacatgtagac gaggagacaggggcttatcacaagggtcagccggcaataaaaaagaagaagcgtgatcgagatttgacgcctgaacgatc agagactcgtagagtgacacagagtgtagatcgggggacaaggtcacgtagacgagcttacgacgcagattcaggagaga gtcacgaagaagcacatctaccctacgctgtatttgttaaatacatggaagagatgaagaaagagctaagatgtgacatt gtgaaggacgttgccaagaagacagtaaaacatgtactgaagggactggacggtgccgtcatacaaggtgtgaaaggtcc cgagggtgctgacccttcaatcacaactgtactaccaaaggcagagaaaaaaccggcagatccaaacgtctctcatccta tttactaccacaacaatgtgtactgtgatttttgtgagaaggtcatcgtaggaccacggtacaagtgctgcaactgcgtg gactatgacctttgtgaacagtgtgaggggatttacggagttcacgaccccaatcatgtctttctgaagcttcgtaagcc gatcaaacttcacagaaaaactccgttaatgaagaacatgctgtacaagatgtatcagctcccgtcgacggagtcagagg aaactccagagaaaggtgctcatggagaagagatggaggaatccccagacgccatgatagagaatctggagaacagaacc aaggctaagatggaaagaattcaagccaagctcgctaggaaaagggaacacctaaaggagaaggaaaagaaactgataga aaaacagaaaaggaaagaagagaaactgaaacagaagttacaacagcagaaagctccacagaaaggaataccagaggggc tagctacaaacatgtttgtgtatggtaatctcggagccaagtatttaggggatgtaaatgtggaagacgggacccgtata cagcctggaacgaaattcctcaaaacttggaagatgcaaaatatcggcaaagtaccctggagggagtcaactaagctgaa gaatgtatacggtaccattccaacgctcaaagacaaagtggacgtacctctccttaaacccggagaacatggatttgtct ctgtgactctcatagcaccagatcaaccagggaagtatcagagtcactggaagatggttgattctggagttcaattcgga catcgagtctggtgtgaaatcgaagtagaggaaaaacttgtcctcgagccacagcaaaaaactccactacagattgtaga gcaagcaaaggctgcagaagaaattgacgacaacaacagtgtgcgagttgccgtgcgatgccgtcccctgagccgtaggg aggaggaaaacaaagtagagtcctgcgtagaaatctctgacactcagccgatcgtgactgtgggagacaaatcaatggca tttgattatgttttccaaccatcggcaaaacagacagaagttttctttgtgatggttgagccattactggaacaagtatt ggaaggtcataatgcggcagttttagcatatggtgagacaggaagtggtagaacgtttaccatgatgggtggtcgagatg tggagggcgttctacctaacaccttacaggctttgttcagcatgatagatagagctacagatgccgaattcacagtgaaa atttcctacatcgaggatttcaaggaccaactctacgacatgatgaagaaacatgacgagagagagccacttagggtcaa agaaagaccagccactggaatctatatccaagatttgacagaggttgaagtgaaaagttacgatgaagccctacagtatc ttcccatcagtgctaacgccacaagttgtatatcttatgcttcttacttcaattactgtaacagggactcttcctttatc ttcacagtgcaggtcgagagacgcagcaaaattgaccagtaa |
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Protein
| Protein ID | pfu_aug2.0_1491.1_05083.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1491.1_05083.t1 MRVLSLTIQKLCPMLKFLKIRSKVKVXNNNSSSNNKNNNNSSKTNNKNNYNGSSNNKNNNNSSCNNKNNDNSSSYNKNND NSSSYNKNNNNSSRYNKNNSSSYNKTTTTAVATTKTTTTAVVTTKTTTTAVVTTKTTTTAVATTKTTTTAVATTKTTTTA VATTKTTAAVAVAVATTVAASKTTTATAATQTQQNKITVSFCLLKMDDIIALNVTFEGDGESPEIFRLYSRVPWIDFEAM LKAQYDCDDIQVFYIDSDGDYITVSSEEEYKEAKKLAKQCSNTLHMKVRNIGPDANLFEQNEVPSHVPIPLPNGPFKHSE ESEVTAPPSEHQVEIPPEEPQIERVIVVPPQQDINRSIENIVIQVDMATGERTEIKCTTGHDVEMTEKKESSSPKDIHVD EETGAYHKGQPAIKKKKRDRDLTPERSETRRVTQSVDRGTRSRRRAYDADSGESHEEAHLPYAVFVKYMEEMKKELRCDI VKDVAKKTVKHVLKGLDGAVIQGVKGPEGADPSITTVLPKAEKKPADPNVSHPIYYHNNVYCDFCEKVIVGPRYKCCNCV DYDLCEQCEGIYGVHDPNHVFLKLRKPIKLHRKTPLMKNMLYKMYQLPSTESEETPEKGAHGEEMEESPDAMIENLENRT KAKMERIQAKLARKREHLKEKEKKLIEKQKRKEEKLKQKLQQQKAPQKGIPEGLATNMFVYGNLGAKYLGDVNVEDGTRI QPGTKFLKTWKMQNIGKVPWRESTKLKNVYGTIPTLKDKVDVPLLKPGEHGFVSVTLIAPDQPGKYQSHWKMVDSGVQFG HRVWCEIEVEEKLVLEPQQKTPLQIVEQAKAAEEIDDNNSVRVAVRCRPLSRREEENKVESCVEISDTQPIVTVGDKSMA FDYVFQPSAKQTEVFFVMVEPLLEQVLEGHNAAVLAYGETGSGRTFTMMGGRDVEGVLPNTLQALFSMIDRATDAEFTVK ISYIEDFKDQLYDMMKKHDEREPLRVKERPATGIYIQDLTEVEVKSYDEALQYLPISANATSCISYASYFNYCNRDSSFI FTVQVERRSKIDQ |
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