Gene
| Gene Model ID | pfu_aug2.0_1491.1_05084 |
|---|---|
| Locus | scaffold1491.1 : 78037 ... 83495 : - |
| To GenomeBrowser | scaffold1491.1:78037..83495 |
| Genes list of scaffold | scaffold1491.1 |
| Synonym | pfu_aug1.0_11707.1_39212 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| leucine--trna cytoplasmic | GO:0002161 GO:0004823 GO:0005524 GO:0005737 GO:0006429 GO:0006450 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1491.1_05084.t1 | 1 | 1 | tRNA-synt_1e | 125 | 198 | 9.2e-06 | 24.9 | 2.6e-09 | 1.3e-05 | 24.4 |
| pfu_aug2.0_1491.1_05084.t1 | 1 | 1 | tRNA-synt_1g | 130 | 198 | 2.3e-06 | 26.5 | 7.4e-10 | 3.7e-06 | 25.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1491.1_05084.t1 | gi|260833030|ref|XP_002611460.1| | hypothetical protein BRAFLDRAFT_63907 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1491.1_05084.t1 | gi|548351095|ref|XP_005727849.1| | PREDICTED: leucine--tRNA ligase, cytoplasmic-like [Pundamilia nyererei] | 0.0 |
| pfu_aug2.0_1491.1_05084.t1 | gi|498982803|ref|XP_004550393.1| | PREDICTED: leucine--tRNA ligase, cytoplasmic [Maylandia zebra] | 0.0 |
| pfu_aug2.0_1491.1_05084.t1 | gi|348518942|ref|XP_003446990.1| | PREDICTED: leucine--tRNA ligase, cytoplasmic [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_1491.1_05084.t1 | gi|554831824|ref|XP_005926471.1| | PREDICTED: leucine--tRNA ligase, cytoplasmic-like [Haplochromis burtoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1491.1_05084.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1491.1_05084.t1 atggcattagaagccttgtcgaagatagagacgtactctgatgaagtcaggaagaactttgaggctactttagactggct acacgaacatgcctgctctagatcttatggtcttggaaccaagctgccatgggatcctcagtacttgatagagtcactgt ctgactccacaatatacaatgcttactatacggtagcacatctgctgcagggaggagtgtttgatggaagtgggaaaagt ccagctaacatcagacctgagcagatgacccctgagatatgggactacatattctacaaggacaagcccctccctaagac ggatatacccaaggccactctggacaagatgagggcggagttcctgtactggtacccagtagatctgagagtgtcgggca aagacctggtacccaaccatctaacatactatatatataaccactgtgctatgtgggacaaggacaggtcaaggtggcct acaggcattagggccaatggacatttacagcttaactctgagaaaatgtcaaagcaaacaggaaattttttgactttgtc gtcagctatagacaaattttcagctgatgtgtttaagagccccaatacctcttataaagaactccttatcttgactggtc tgaaagccattcactgcaagtatgacgtcatcagactgaaagtgggtgccagaaatagctgctttcagttttag |
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Protein
| Protein ID | pfu_aug2.0_1491.1_05084.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1491.1_05084.t1 MALEALSKIETYSDEVRKNFEATLDWLHEHACSRSYGLGTKLPWDPQYLIESLSDSTIYNAYYTVAHLLQGGVFDGSGKS PANIRPEQMTPEIWDYIFYKDKPLPKTDIPKATLDKMRAEFLYWYPVDLRVSGKDLVPNHLTYYIYNHCAMWDKDRSRWP TGIRANGHLQLNSEKMSKQTGNFLTLSSAIDKFSADVFKSPNTSYKELLILTGLKAIHCKYDVIRLKVGARNSCFQF |
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