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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1493.1_11701
Locus scaffold1493.1 : 107396 ... 126796 : +
To GenomeBrowser scaffold1493.1:107396..126796
Genes list of scaffold scaffold1493.1
Synonym pfu_aug1.0_3328.1_30395

Manual annotation
Annotation by Blast2GO
Annotation GO
26s proteasome non-atpase regulatory subunit 10 GO:0031323 GO:0044424 GO:0044763 GO:0048523

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1493.1_11701.t1 3 1 Ank_2 7 68 3.7e-22 78.4 5.0e-12 1.5e-08 34.8
pfu_aug2.0_1493.1_11701.t1 4 1 Ank 8 34 5.5e-22 76.4 2.6e-06 0.0078 15.9
pfu_aug2.0_1493.1_11701.t1 4 1 Ank_4 8 57 6.0e-20 71.2 1.7e-08 5.0e-05 23.6
pfu_aug2.0_1493.1_11701.t1 4 1 Ank_3 8 32 3.1e-11 42.3 0.026 77.0 3.9
pfu_aug2.0_1493.1_11701.t1 5 1 Ank_5 10 45 2.3e-17 62.6 2.4e-05 0.072 13.3
pfu_aug2.0_1493.1_11701.t1 5 2 Ank_5 23 77 2.3e-17 62.6 4.2e-10 1.3e-06 28.4
pfu_aug2.0_1493.1_11701.t1 4 2 Ank 37 68 5.5e-22 76.4 2.8e-06 0.0083 15.8
pfu_aug2.0_1493.1_11701.t1 4 2 Ank_3 37 64 3.1e-11 42.3 0.0036 11.0 6.6
pfu_aug2.0_1493.1_11701.t1 4 2 Ank_4 55 91 6.0e-20 71.2 1.7e-08 5.0e-05 23.7
pfu_aug2.0_1493.1_11701.t1 5 3 Ank_5 57 110 2.3e-17 62.6 4.3e-12 1.3e-08 34.8
pfu_aug2.0_1493.1_11701.t1 4 3 Ank 71 101 5.5e-22 76.4 4.0e-09 1.2e-05 24.8
pfu_aug2.0_1493.1_11701.t1 4 3 Ank_4 71 123 6.0e-20 71.2 5.8e-13 1.7e-09 37.8
pfu_aug2.0_1493.1_11701.t1 4 3 Ank_3 71 96 3.1e-11 42.3 4.0e-05 0.12 12.6
pfu_aug2.0_1493.1_11701.t1 3 2 Ank_2 73 132 3.7e-22 78.4 7.1e-14 2.1e-10 40.7
pfu_aug2.0_1493.1_11701.t1 4 4 Ank 104 130 5.5e-22 76.4 8.7e-06 0.026 14.3
pfu_aug2.0_1493.1_11701.t1 4 4 Ank_3 104 129 3.1e-11 42.3 3.3e-05 0.097 12.9
pfu_aug2.0_1493.1_11701.t1 4 4 Ank_4 170 200 6.0e-20 71.2 4.0 12000.0 -3.0
pfu_aug2.0_1493.1_11701.t1 3 3 Ank_2 693 710 3.7e-22 78.4 5.0 15000.0 -3.9
pfu_aug2.0_1493.1_11701.t1 5 4 Ank_5 696 713 2.3e-17 62.6 2.3 6800.0 -2.5
pfu_aug2.0_1493.1_11701.t1 5 5 Ank_5 836 849 2.3e-17 62.6 2.8 8400.0 -2.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1493.1_11701.t1 gi|514757022|ref|XP_005022215.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Anas platyrhynchos] 3.0e-18
pfu_aug2.0_1493.1_11701.t1 gi|723537427|ref|XP_010303683.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 10, partial [Balearica regulorum gibbericeps] 3.0e-18
pfu_aug2.0_1493.1_11701.t1 gi|695158197|ref|XP_009507161.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 10, partial [Phalacrocorax carbo] 5.0e-18
pfu_aug2.0_1493.1_11701.t1 gi|701395457|ref|XP_009995535.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Chaetura pelagica] 6.0e-18
pfu_aug2.0_1493.1_11701.t1 gi|719745222|ref|XP_010211015.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Tinamus guttatus] 7.0e-18

Transcript
Transcript IDpfu_aug2.0_1493.1_11701.t1
Definition-
>pfu_aug2.0_1493.1_11701.t1
atgaagaccaaatcgaagcagttattcattgctgtagaaaaaggacagtccagaaacgttgaggtccttttagaccaggg
tgtcagcgtcaacataagggatgagacagatggttctacgcctctcatccgggcagccaaagggcgaaattacgtcatcc
agcaattactgcttacttatggtgctgatcctaaatcaaaagacgcagccggcctttctgcgcttcattacatagctgag
aatggtgacgtagagagtctgaagctgttgttggcgcatggcgcgtccatggacgccaaggactcctcggggtgtacgcc
attacactatagcgtcgacagaagccgggtgtcaacaaccgatcttttagtattttgtggcgccgatgctaaattaatga
ataagaggaatgttgcaccagctaaagttggaagacatcaaaagattcgctctttgctggaggactctgagaaagtcgtc
gatggaataagaaataatgatattcattttgaatccgtagaactgatagcaggaaagaagatcgttttacctacgataga
cttagaaattgacactccagaaacattttcagcgaaaaacctcagttttctgtgtcggagagtgcgaccggaatattgtt
caaaccgtagaattttacccacgaaaaaagagcttcttattagtgatacgtttgaatacaggacttcctcaactcatttt
aatggaatagttcaaatgggcgttcccctctatgcataccccgaaccctacgaggacatttacctgaaaactgacgccga
cgtcgaatatggacctataaatagatacacaggaatctatagaaacgagagatcgaaaggaaaattaaagtggatgtgct
gtgtggaattggacgtaacgaaagtcaattctttcgttcttgtaacacggccaagagtagaatattttaatgttggagag
aatggtgaaatattctattcagacgtagacaaatttctacaaatacaggttcgaccgaacacatttgaatctgggaagat
aagtttggaggtgattccgagcccagtttataatcaggacacttacaaaaatgtactgtctatcggtcacttctatgaca
tgaatcatagttaccatgttggtaactttcacaaagatggcgtcgggttcacaatgcctatcccaaacgatttcgaagga
gacggtgaactttgtatcctaggagcaaatctgaacagtgatttcgattatgaaaaggatgaagatcgagaaacaatact
tagcaagtgggaaatcatcaatatgaatttgaatccaaaaggaggcaaagagacagttttgagtggtaccttgctcaccg
agctatttccccagaataagacaccccatacaaagagcggatatgtgccagtagagagaagagcgcctattctcgaagaa
gaaacgaaactgaatgcggactccttattacgtcgctcgatgagaaggcaaaaatttcttaactttttcataatgacaaa
accggataagggtttacaccaagctgttatagaatgtgcgcctcctcaaaaagtgacggataggatgaattattggcgtt
cgctcggctacctgcaaaacaaagaggagataagcgtaacacctgacatagagacaaaaaaggatgaagaatatgaaatc
gtatttgagcgaaatataatgaaagcgtatggttcaaaatccatagatcttcagtatcatccgaaaagagacaatttcaa
accgtttcagctagaagtgatagacagggacaaggatgggaggggtgtaatattagtttaccgcaaagtaaatggcgtga
gagatgacaatgaaactacgatcctgccagtggtgctttatgattctttggtggtggacactccacggatcgacgactct
gaattccaaggttttctacggaactctttgttgaagaggatagcagacaagcttggttccccggcgtggattcaggtctg
tatactattgggactctcctttcagacgatagacgagtacagactgaaaccatcaactccaagacaaacattggaacata
agatattcaagattttactggaatggagggaaaggtgcaaaaatagagaggatagaggggtcccggatctcgttttggca
cttcatagagttaacagacctgacttggaaaatgaactcatatcggagttaagaaattggttggatgataaagagggcga
aaaggatgcattcatagaatgggcagaggagaatatgcacggcttgggcagacaaaaagaaataaacgaagaagaggccg
tgccgatgtctgacagcttcctggttttgttcacgcgaaacaacgagcatatgaactgtcatagtctgggactgagtatg
gatctatacgaaagtcaagtcaatgacgtcatagaagatagtacaatacctgatcacatcatgaaattagtaaaggttct
tgtcatggctcgggataagattggtgatgataccaaatcctttactgtcttagccgatgccctggaaacttgtcaactga
tgagtgcacgtgattggctgatgagctcagcaaccaagtggtgtgaaagaaaatctgaaaaagacacaaaattcaggaaa
gatatcaaaagggctttaaaagaacttaacggagagaaaatcgacgacagtgatatggacgacgatctaaaagaggaata
tgaaaagggagattataccaaggatgaaactgaagaaaactaa

Protein
Protein IDpfu_aug2.0_1493.1_11701.t1
Definition-
>pfu_aug2.0_1493.1_11701.t1
MKTKSKQLFIAVEKGQSRNVEVLLDQGVSVNIRDETDGSTPLIRAAKGRNYVIQQLLLTYGADPKSKDAAGLSALHYIAE
NGDVESLKLLLAHGASMDAKDSSGCTPLHYSVDRSRVSTTDLLVFCGADAKLMNKRNVAPAKVGRHQKIRSLLEDSEKVV
DGIRNNDIHFESVELIAGKKIVLPTIDLEIDTPETFSAKNLSFLCRRVRPEYCSNRRILPTKKELLISDTFEYRTSSTHF
NGIVQMGVPLYAYPEPYEDIYLKTDADVEYGPINRYTGIYRNERSKGKLKWMCCVELDVTKVNSFVLVTRPRVEYFNVGE
NGEIFYSDVDKFLQIQVRPNTFESGKISLEVIPSPVYNQDTYKNVLSIGHFYDMNHSYHVGNFHKDGVGFTMPIPNDFEG
DGELCILGANLNSDFDYEKDEDRETILSKWEIINMNLNPKGGKETVLSGTLLTELFPQNKTPHTKSGYVPVERRAPILEE
ETKLNADSLLRRSMRRQKFLNFFIMTKPDKGLHQAVIECAPPQKVTDRMNYWRSLGYLQNKEEISVTPDIETKKDEEYEI
VFERNIMKAYGSKSIDLQYHPKRDNFKPFQLEVIDRDKDGRGVILVYRKVNGVRDDNETTILPVVLYDSLVVDTPRIDDS
EFQGFLRNSLLKRIADKLGSPAWIQVCILLGLSFQTIDEYRLKPSTPRQTLEHKIFKILLEWRERCKNREDRGVPDLVLA
LHRVNRPDLENELISELRNWLDDKEGEKDAFIEWAEENMHGLGRQKEINEEEAVPMSDSFLVLFTRNNEHMNCHSLGLSM
DLYESQVNDVIEDSTIPDHIMKLVKVLVMARDKIGDDTKSFTVLADALETCQLMSARDWLMSSATKWCERKSEKDTKFRK
DIKRALKELNGEKIDDSDMDDDLKEEYEKGDYTKDETEEN

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