Gene
| Gene Model ID | pfu_aug2.0_1493.1_11702 |
|---|---|
| Locus | scaffold1493.1 : 133776 ... 148138 : + |
| To GenomeBrowser | scaffold1493.1:133776..148138 |
| Genes list of scaffold | scaffold1493.1 |
| Synonym | pfu_aug1.0_6909.1_45535 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1493.1_11702.t1 | 2 | 1 | Ank_2 | 7 | 67 | 3.9e-21 | 75.2 | 1.5e-12 | 4.5e-09 | 36.5 |
| pfu_aug2.0_1493.1_11702.t1 | 3 | 1 | Ank_4 | 7 | 57 | 1.4e-15 | 57.2 | 2.5e-07 | 0.00073 | 19.9 |
| pfu_aug2.0_1493.1_11702.t1 | 4 | 1 | Ank_3 | 7 | 30 | 1.9e-09 | 36.8 | 1.3 | 3800.0 | -1.3 |
| pfu_aug2.0_1493.1_11702.t1 | 4 | 1 | Ank | 8 | 34 | 1.3e-19 | 68.9 | 0.00093 | 2.8 | 7.9 |
| pfu_aug2.0_1493.1_11702.t1 | 5 | 1 | Ank_5 | 10 | 41 | 8.8e-12 | 44.8 | 0.022 | 66.0 | 3.9 |
| pfu_aug2.0_1493.1_11702.t1 | 5 | 2 | Ank_5 | 24 | 75 | 8.8e-12 | 44.8 | 1.1e-07 | 0.00032 | 20.8 |
| pfu_aug2.0_1493.1_11702.t1 | 4 | 2 | Ank | 36 | 68 | 1.3e-19 | 68.9 | 4.4e-09 | 1.3e-05 | 24.7 |
| pfu_aug2.0_1493.1_11702.t1 | 4 | 2 | Ank_3 | 36 | 64 | 1.9e-09 | 36.8 | 5.5e-05 | 0.16 | 12.2 |
| pfu_aug2.0_1493.1_11702.t1 | 3 | 2 | Ank_4 | 55 | 90 | 1.4e-15 | 57.2 | 4.4e-09 | 1.3e-05 | 25.5 |
| pfu_aug2.0_1493.1_11702.t1 | 5 | 3 | Ank_5 | 59 | 108 | 8.8e-12 | 44.8 | 5.5e-11 | 1.6e-07 | 31.3 |
| pfu_aug2.0_1493.1_11702.t1 | 4 | 3 | Ank | 70 | 100 | 1.3e-19 | 68.9 | 2.0e-07 | 0.0006 | 19.4 |
| pfu_aug2.0_1493.1_11702.t1 | 4 | 3 | Ank_3 | 70 | 97 | 1.9e-09 | 36.8 | 0.0025 | 7.3 | 7.1 |
| pfu_aug2.0_1493.1_11702.t1 | 2 | 2 | Ank_2 | 71 | 133 | 3.9e-21 | 75.2 | 1.4e-12 | 4.2e-09 | 36.6 |
| pfu_aug2.0_1493.1_11702.t1 | 3 | 3 | Ank_4 | 81 | 123 | 1.4e-15 | 57.2 | 6.2e-07 | 0.0018 | 18.7 |
| pfu_aug2.0_1493.1_11702.t1 | 4 | 4 | Ank | 103 | 133 | 1.3e-19 | 68.9 | 6.5e-05 | 0.19 | 11.5 |
| pfu_aug2.0_1493.1_11702.t1 | 4 | 4 | Ank_3 | 103 | 128 | 1.9e-09 | 36.8 | 7.0e-05 | 0.21 | 11.9 |
| pfu_aug2.0_1493.1_11702.t1 | 5 | 4 | Ank_5 | 122 | 136 | 8.8e-12 | 44.8 | 3.4 | 10000.0 | -3.0 |
| pfu_aug2.0_1493.1_11702.t1 | 5 | 5 | Ank_5 | 239 | 268 | 8.8e-12 | 44.8 | 1.8 | 5400.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1493.1_11702.t1 | gi|123446669|ref|XP_001312083.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 5.0e-18 |
| pfu_aug2.0_1493.1_11702.t1 | gi|123382197|ref|XP_001298658.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 1.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_1493.1_11702.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1493.1_11702.t1 atgacgaaagctgagcaacttttcgccgctgtcgaaagaggtcaaaagggaaatgctgagaaagtactaagtcaaggagc aaatatcaactgtcgaaacaagatagatggcagtacccctcttattgaagctgccaaacgcagacattttgccatacagc aaatgcttctctgcaatggagcaaatcctaacttaaaggacaataaaggattaactgctcttcactttgtttcggagacg ggggacgtagaaagtatgaaacttctgattgcaagtggggctcatattgactccagggattcgtctggctgttctccctt gttttacagtgtccaaagcgacaaagtgaatgctgttgatcttcttatcttttgtggagcagatgcatttgttaaaaata agaatggcgttagtccatattcgatggggaaaagtaaaagaaatgaagaaataaaacggatactatattacgccgatcat acaaaggaaggaatcaaaaatggagacatctaccttcaacatgtagaactgacggcaggtgaaataacattggacaagat agacttagatgttgaaacttcaaagtcattctcacccaaagcgctcagctttttgtgtcgtagagttcgaccagagtata gtacgcacgctgagattctgccctcagagaaagaaactctgatcagtgatgcttttgaatacatgatatcaacagcacat gtacagggtagtgtggaagtatgtgtcacgttgtattcctacccagaacctcatgaagacgtgtatctgaagacagataa aggaaccaaggcccaacctatagataaagcctctgccatcacaaaaactgaggaaatcaaaggacagccaaagtggaaat gtcgagtaaatctagacataggaaaagttagatcctttgtgatggtgactttgccgaaaattgaagaatttccagtagga acaaaaggtggatcattcatctctgaagttgacccaactatacagattgaagttcaacccaaaatattgagtgcaggaga aataagccttgaggttgcgccaagtcctgtgtacaagcaaaaagattttcaagaagttttgtcagttggtaatttttacg atgttatcaatagcaagcgtgtcgagaaaatccacaaaggtggtgttatatttacaatgcctgttcctgaagactatgag ggcgatggagaactatacattatgtcaggagaaatgtcgagtgatttcgacttcgagaaagaggaagatacagaaacaat tttgcaaagatgggaggtggctgaacgaaatctcagacctacagacggaactgtagtttgttcactttctcatttttcca tatatgttcctctggaaaggagaagcttttcgacggatgatcaaataaaggtagatgctcataatcttttgcgacgatgc ttgcgcaaggagtgcttcctccagttcttctgcttgatcaggtcagactcaggaatgtaccaagcagtcatcgaatgtat ttcgccagataaattagcagaccgattagactactggttgtcaataggatttattcagaaatcgaaatgtatcacaactg atattgagactcgaagtggagaagaatacgaacttgaatttcagggaaatattaggaaagtttatggactccctaatatc aagctgcaatatcatacaaagagacaaaatttccaaacattccatctcgaagtcatagacaaggaaaaggtatgggcggg aaatgtagctatccgttcaaaagaaaatggaaaggacgatcaacaagaagtgatatccattcctatagtccttgaagatg aaataccagaattcgactatggattttttgatgatcccatgttacgaaagatagcgtcattactagggaagccaatgaca tcattcttcaagcgaattgcagacaaactaggaacaccagcatgggtgcaagcattcgttcatttaggattgtccatgca gatcattgatagacacaagtcaaagccaactacaccgtataacaccatagagaacaaaatattcatgattctcagagagt ggcgagagatgtataaggataaagatgacaaaggaatttcagggctgcgttcagctttttcaaaaattaaaaggaaggat atagatgaagaaatgatgatggaactgaagatatggatggagtctcagaccgatgataccgattcattctttgtatggat cgaccgaaatataaaggatctgaaatggaagaaagctatcaaaaaagagatattttccccaatgtctgataattttctga atttactggtcaaaaaccatagaggagcgagcttttgtcaagtaggaatttgcatggaaatgaacgaaagccaaattaac gaaatcatagaagatgaaaccgttccagacagttgcatgaaatatgttcagattttagggcttgccagggataacattgg tgacgtagcaaaatctttcaagatattagtcaacgccctggagttatgtgggctcaacaaagcaaaagagtgggcgatac aaacggcaaaatactggtgtgaagaattcccaggtaaaagctcgaaacttaaaacaaagctcaagagaatatttgtcgaa ctcaatgttaatgctcctcatgacagtgtacacagaggacaagaacaaacggaggaggcagacgacagatcacgaaaatt gagtgagttgtccatacgttctactgaaaccgatgaagaaagtctaccatctactcatggactaagatcagtttcatcgg tgatacgtatggcggaagatgagaaagcaagtcatatgaatttagaagagtgttgtgatgatgtattcccaacccttcca tctaaagaagaactatatggagaagatcgtcaacttgaagaatctgaccattaa |
|
Protein
| Protein ID | pfu_aug2.0_1493.1_11702.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1493.1_11702.t1 MTKAEQLFAAVERGQKGNAEKVLSQGANINCRNKIDGSTPLIEAAKRRHFAIQQMLLCNGANPNLKDNKGLTALHFVSET GDVESMKLLIASGAHIDSRDSSGCSPLFYSVQSDKVNAVDLLIFCGADAFVKNKNGVSPYSMGKSKRNEEIKRILYYADH TKEGIKNGDIYLQHVELTAGEITLDKIDLDVETSKSFSPKALSFLCRRVRPEYSTHAEILPSEKETLISDAFEYMISTAH VQGSVEVCVTLYSYPEPHEDVYLKTDKGTKAQPIDKASAITKTEEIKGQPKWKCRVNLDIGKVRSFVMVTLPKIEEFPVG TKGGSFISEVDPTIQIEVQPKILSAGEISLEVAPSPVYKQKDFQEVLSVGNFYDVINSKRVEKIHKGGVIFTMPVPEDYE GDGELYIMSGEMSSDFDFEKEEDTETILQRWEVAERNLRPTDGTVVCSLSHFSIYVPLERRSFSTDDQIKVDAHNLLRRC LRKECFLQFFCLIRSDSGMYQAVIECISPDKLADRLDYWLSIGFIQKSKCITTDIETRSGEEYELEFQGNIRKVYGLPNI KLQYHTKRQNFQTFHLEVIDKEKVWAGNVAIRSKENGKDDQQEVISIPIVLEDEIPEFDYGFFDDPMLRKIASLLGKPMT SFFKRIADKLGTPAWVQAFVHLGLSMQIIDRHKSKPTTPYNTIENKIFMILREWREMYKDKDDKGISGLRSAFSKIKRKD IDEEMMMELKIWMESQTDDTDSFFVWIDRNIKDLKWKKAIKKEIFSPMSDNFLNLLVKNHRGASFCQVGICMEMNESQIN EIIEDETVPDSCMKYVQILGLARDNIGDVAKSFKILVNALELCGLNKAKEWAIQTAKYWCEEFPGKSSKLKTKLKRIFVE LNVNAPHDSVHRGQEQTEEADDRSRKLSELSIRSTETDEESLPSTHGLRSVSSVIRMAEDEKASHMNLEECCDDVFPTLP SKEELYGEDRQLEESDH |
|