Gene
| Gene Model ID | pfu_aug2.0_15.1_16694 |
|---|---|
| Locus | scaffold15.1 : 76370 ... 92255 : - |
| To GenomeBrowser | scaffold15.1:76370..92255 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | pfu_aug1.0_3272.1_01388 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15.1_16694.t1 | 2 | 1 | DNA_pol_B_2 | 538 | 730 | 5.3e-19 | 68.2 | 9.3e-18 | 4.6e-14 | 51.9 |
| pfu_aug2.0_15.1_16694.t1 | 2 | 2 | DNA_pol_B_2 | 964 | 1060 | 5.3e-19 | 68.2 | 5.5e-06 | 0.027 | 13.1 |
| pfu_aug2.0_15.1_16694.t1 | 2 | 1 | TBP | 1104 | 1188 | 6.7e-23 | 79.8 | 8.5e-16 | 4.2e-12 | 45.2 |
| pfu_aug2.0_15.1_16694.t1 | 2 | 2 | TBP | 1194 | 1259 | 6.7e-23 | 79.8 | 1.3e-11 | 6.5e-08 | 31.8 |
| pfu_aug2.0_15.1_16694.t1 | 2 | 1 | rve | 1275 | 1352 | 1.3e-08 | 34.9 | 1.2e-11 | 5.9e-08 | 32.8 |
| pfu_aug2.0_15.1_16694.t1 | 2 | 2 | rve | 1337 | 1382 | 1.3e-08 | 34.9 | 0.13 | 630.0 | 0.4 |
Transcript
| Transcript ID | pfu_aug2.0_15.1_16694.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16694.t1 atggaaatcccttcggacgaattcgatgactggctttcctccattaccgacatacaactctttgaggccatcgaaaaatc ttttcaggaattccaagttctttcatgcgacaattgctcaatgcaattccaaaattcacaaagtttaggcgatgaaaacc agccatcttcatcaagtggacggacgaaaaaaggaaagacatttcagtgtaacagatgcttttcaaaattcaaaaataga tctatcgacttccatcaacacaaagagaatgcttgtagccacaaaaaggtgcttgattttactttcaaagactaccaacc gaacgacctaggtcgtgtagtcattcatcatgacgcggttgaccccatcgttgtcctcttaatgaaagtagaggaactta ccacagacctcatcatggaacatctcatcaacgttctgaatagccatcaagaattgaccttaaatactaccttcaaaatt tcagttgcaatcatttctatgcctagaggtgcaggtcgggtttacaccaccaagctgcgaggggagaacaattccattgc ccggaaacgctccctcgtacaaattgtcaatgatgacaatttgtgtatgaccagggcaattgctgttgcatgggccagta aacaaatatgcgggaaagaagaatgggaggaactaacaagaaaccgcgtcagaggccagtccaacatagatttcatcctc acccaccgaaagatgccaaggacccattacactcacgtcaggaccaagggttccaaggcacaatgtgaactggcagaagc cctgtgccatctgtcaaaggttcctttgaacaggaaaggttgcatcacagaccttcgagattttgaaaaagttcttaaag tcaggattctggtcatcgactcctccatcggtaacagatttagttatgtcggcacaggtggtgaccaagacgtctatcta tatatggttgatcaagaccatttccatgccattgtctcaatcaccggtttcttcagccgcagctacttctgccaaacctg tctcaaaccatacacaaatctggataggcatctgtgtgaaagactttgttcgatatgcaaagagagccattgtacagaaa gcaacacacccgtttcatgtcttagctgtaaaatggagtgccgctccaaagaatgctacgacaggcacaagatgaagccc tccgaaaaagaagagcggatatcaagacaaaccattgatgtcagtgaatgtaaaaaatactggaagtgtacagcttgctg caacgtggtcaaaagactggacagggatataaccaaagtaccccatatctgcggagaatggacctgccagaactgcaaaa agctcgtacacgaaccccatcaatgctacatgagagctctgtctccctccaaagaaaattcccgtcagagaaagctgata ttcttcgactttgaatgcacccagagtaccatctaccaatgtcaggacggataccagccagattcagaaacccggaaatg ctgccattgccgtgaagacatatgcgggcgagaacaacaccttcctaactacgaatgccagccaggagttttgtctttgg ctcttcaccgagcaactgtggtggccaataacatgaaaggttatgatggcgtcttcctccttggttatatgctgcgaaat agcataattcccaagaccgttatatacagtggctccaaaattatgtatatgtacgtacaaaagggaatggaactgcggtt catcgattctttgaatttctttcaaatgcctctcgccaagttaccagacgcctttgacctgcgtgtggaattggaagggg atgcagaattaaggaaaggatactttccccattactttaatgtacccgagaacgtcaactatgtgggtccctatccggaa gctaggtactatggtgcagacagcatgcctacgggtcctcgtcaaaagatgttggatttgttgcaacagaagagggattc gggagccgtctttgacttcgctaaagaaatggatgcatactgccgaagtgacgtcaccattctaatgcaggcatgcatca aattcaaaagtttgatgaagacagccacaaagggaatgatcgaccccttcgattctatcaccattgctggaatgtgccta aacaccttcaggacatgctttctgcaagaagaatggaagatacaacttcaccaaaagacagaattggtccaagataccag agatgagggttgccactggcatggatgcccaacctgttacccaactgaccgttacctcataaaaattctggggacggaca aatcggcaacagagctccacactctgacaagattaagggagaaagccatcaaagacagaggatacaactatgtgagcatc tgggagcaccagtttcgagcccgcctagagtgcaatagtgagatgagagactttgtccaaacccttgacttaatggagcc catcgatcccagggagagtttcttcggcggaagaacgaatgccatacgtctccactgccagattcaaccgggtcaagaga ttcgagtctgtgcagagaaggaacaggacatgccctgccagcacacggacgaagagaggtgttttgtggggacatggacc acgccggagctagccaaagcactggagaaggaataccagatcctcaagatttaccaggtgtatcattggcccaagaccac ccagtacgatccgactctcagagagggaggtctttttgcaaagtacataaacaccttcctaaagttaaagcaggaatcca gtgggtttccgtcttggtgcaaaactatggcagactgtaaaaagtatgtagaacaatactttgcacacgaaggcatacag cttgattgggattttattgaaaagaacaaagggttacgggccttagccaagctgtgtctcaattctctttggggtaagtt gggacagcgaaacaacatgatgtcatcacgctacttttttaaagatcaggtcgatgatttttaccagctcctaaccgaac ggaccaaggtggtacagaatcttaacatcatgaacgaagagacagtccacgtgtcttacgtcagctcttcagagttttct actgtcagtacaaatacaaacatctacttggcaaccttcactaccgcatgggctcgtttgaaactgtacgactctccggg aagacgtgttgtaccaagacacggacagtgtgatctacctttgtcggcctggggaaaacgagcgtccataaggagactac ctgggagaactgaccgacgaagctccactatggttcgtatcagtaatatcgtctgttcggtcgatttggattgccgaatc gaccttagaaatctagccaagaccgttacaaatattcgatatcattccgatcggcacaatgtggccatttggcaaaacag gcgaatcgggggaaattgtctggtgtacgctaaaggaaaactagtgtgtaatggttatgtggaatctaccgaagctgcaa aaaggagactcaggtgtaatgcacgtaaacttcagaaactagggtacccagtgcgctttaaaaagttcagaatctttaca atatccatggttcacgacctgggtattcccatctcgcttccggacttacgcaatgcacgttacgaacccgaaatcattcc cggagctgtattggcaattgaagacgtacgcttcacttgctttcattccggtaaaatcatcatttcgggaatcaaaagag acgaggatatcgatctcttggtattccccaccatttgtgagatctttcagataatgaataagagatacttcagcggaaga ccactcaaagtcaaaacatttaaagccgtagtggaggctatgaacgacatcctggctatgggtagacaaccttctctgtt acgtacagacaaaggatccgaattcaaaaacaaagagttctctctattctgtaaaagaaaaggtatcaaacacttttgga cacagaacgaaacgaaatgcgcatatgccgagcgggtcatcaagactctcaaaatgaaaatctacagaatgatgaccgat cggcacaatgaatatgtagaccatctgccggacatcatcagcagctacaatcacacattccatcggtctttgggcactca acccattctggttactaaagacaacgaaagcgaaatacatttgaagcagtacctgatacgagctaaaaagaaaagacgaa tcagaaggagggcctatggcttgagaatcggtgatcttgtccgaatttcccatctcaaaagtaaatttgatagagagtat caacagaaatacacgggtgaaatatttagagtcaaaagtagaagaaggagagacaacatcccagtgtatacattagaaga ttgggacaaagaccccattgaaggaacgttttataaacaggaattacaaaaggatccaggaagtttgccatcgggacccg gggaatttaccgttactttacaccaatccttacaagtgtctggacactgggaatgctctttgaaggaaatttctatagat tcacctcacacatctttgtttctcggtgtagacttttgcgaggagtcgtttgtcagaagtcaaacattttcaatactgag acacattccgtcagcctcttcctttgacgggcagtatcaattgtgcattgcatctgaggaaaatatgaccacgcacgttt atgattacgataaaaaggcctgggttccttacgtacccgacattgaccggtataaagactattttgtggccataagtgag gggaaggtcaaacccgggaaatacattgttactccacagactggtaaaggagtcacggatcaactttatatcgtctcacc tacagcacaagctgtagaaatggccaaacaaaccatcttggatcaattggaacatagtttgacattgtttgaaaggcagc cacagaagacgggaattctggtaaaggattttgtagaatacagacctgtcaatcaaatagcgaatgattcacccttagag ttcaacattcctgcagcttccatcaactatgtcgatttaaaacgcaccaggctccatgtcaagcttcaactccagaagaa ggacggtactcctgtgaataaagatgaccccgttgcacttaccaattttcccattgcttctctgttttctcaagtcaaca tcaacctacagcatcaacctctcagccaacttggtacgaattatccgtataaagcctatcttgatgtccttctgaatatt actcaagccgatcaggatggacaatttaccagtatgggttatgcccaagacagtgcagggagcatggatgacccagatcc caacatatcgttgtatatgaggcagacatatactagtgaaggacattacgcatttaatgccgatgacttgtttcaagggg atgcccctaattcacttgttatcggatgcgtagcctctagcgcttttaacggaagttatgacttttatcattacaatttt acctttgtaaactttatggtagatggacagacagtactcaccagaccccttcaacccgattacgagaatgaaaattattt ggaggcctttcaaaccttatttgcggatagagaaaagtcattgaatatatcaaggagctcatatccgaaaggatattgcc tctacgttataaagactcaagaagacaatgatacttctaccctgaaaaaaggacatatccgcttggagttgaaatttgca catgcactaccagaatctgtaattcttgtattgtatgcaaagtttcctagtctgttacaaatagaccaagccaggaatgt ctacacttga |
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Protein
| Protein ID | pfu_aug2.0_15.1_16694.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16694.t1 MEIPSDEFDDWLSSITDIQLFEAIEKSFQEFQVLSCDNCSMQFQNSQSLGDENQPSSSSGRTKKGKTFQCNRCFSKFKNR SIDFHQHKENACSHKKVLDFTFKDYQPNDLGRVVIHHDAVDPIVVLLMKVEELTTDLIMEHLINVLNSHQELTLNTTFKI SVAIISMPRGAGRVYTTKLRGENNSIARKRSLVQIVNDDNLCMTRAIAVAWASKQICGKEEWEELTRNRVRGQSNIDFIL THRKMPRTHYTHVRTKGSKAQCELAEALCHLSKVPLNRKGCITDLRDFEKVLKVRILVIDSSIGNRFSYVGTGGDQDVYL YMVDQDHFHAIVSITGFFSRSYFCQTCLKPYTNLDRHLCERLCSICKESHCTESNTPVSCLSCKMECRSKECYDRHKMKP SEKEERISRQTIDVSECKKYWKCTACCNVVKRLDRDITKVPHICGEWTCQNCKKLVHEPHQCYMRALSPSKENSRQRKLI FFDFECTQSTIYQCQDGYQPDSETRKCCHCREDICGREQHLPNYECQPGVLSLALHRATVVANNMKGYDGVFLLGYMLRN SIIPKTVIYSGSKIMYMYVQKGMELRFIDSLNFFQMPLAKLPDAFDLRVELEGDAELRKGYFPHYFNVPENVNYVGPYPE ARYYGADSMPTGPRQKMLDLLQQKRDSGAVFDFAKEMDAYCRSDVTILMQACIKFKSLMKTATKGMIDPFDSITIAGMCL NTFRTCFLQEEWKIQLHQKTELVQDTRDEGCHWHGCPTCYPTDRYLIKILGTDKSATELHTLTRLREKAIKDRGYNYVSI WEHQFRARLECNSEMRDFVQTLDLMEPIDPRESFFGGRTNAIRLHCQIQPGQEIRVCAEKEQDMPCQHTDEERCFVGTWT TPELAKALEKEYQILKIYQVYHWPKTTQYDPTLREGGLFAKYINTFLKLKQESSGFPSWCKTMADCKKYVEQYFAHEGIQ LDWDFIEKNKGLRALAKLCLNSLWGKLGQRNNMMSSRYFFKDQVDDFYQLLTERTKVVQNLNIMNEETVHVSYVSSSEFS TVSTNTNIYLATFTTAWARLKLYDSPGRRVVPRHGQCDLPLSAWGKRASIRRLPGRTDRRSSTMVRISNIVCSVDLDCRI DLRNLAKTVTNIRYHSDRHNVAIWQNRRIGGNCLVYAKGKLVCNGYVESTEAAKRRLRCNARKLQKLGYPVRFKKFRIFT ISMVHDLGIPISLPDLRNARYEPEIIPGAVLAIEDVRFTCFHSGKIIISGIKRDEDIDLLVFPTICEIFQIMNKRYFSGR PLKVKTFKAVVEAMNDILAMGRQPSLLRTDKGSEFKNKEFSLFCKRKGIKHFWTQNETKCAYAERVIKTLKMKIYRMMTD RHNEYVDHLPDIISSYNHTFHRSLGTQPILVTKDNESEIHLKQYLIRAKKKRRIRRRAYGLRIGDLVRISHLKSKFDREY QQKYTGEIFRVKSRRRRDNIPVYTLEDWDKDPIEGTFYKQELQKDPGSLPSGPGEFTVTLHQSLQVSGHWECSLKEISID SPHTSLFLGVDFCEESFVRSQTFSILRHIPSASSFDGQYQLCIASEENMTTHVYDYDKKAWVPYVPDIDRYKDYFVAISE GKVKPGKYIVTPQTGKGVTDQLYIVSPTAQAVEMAKQTILDQLEHSLTLFERQPQKTGILVKDFVEYRPVNQIANDSPLE FNIPAASINYVDLKRTRLHVKLQLQKKDGTPVNKDDPVALTNFPIASLFSQVNINLQHQPLSQLGTNYPYKAYLDVLLNI TQADQDGQFTSMGYAQDSAGSMDDPDPNISLYMRQTYTSEGHYAFNADDLFQGDAPNSLVIGCVASSAFNGSYDFYHYNF TFVNFMVDGQTVLTRPLQPDYENENYLEAFQTLFADREKSLNISRSSYPKGYCLYVIKTQEDNDTSTLKKGHIRLELKFA HALPESVILVLYAKFPSLLQIDQARNVYT |
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