Gene
| Gene Model ID | pfu_aug2.0_15.1_16697 |
|---|---|
| Locus | scaffold15.1 : 151096 ... 155118 : + |
| To GenomeBrowser | scaffold15.1:151096..155118 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | pfu_aug1.0_1669.1_08050 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15.1_16697.t1 | 1 | 1 | RVT_1 | 391 | 522 | 9.7e-15 | 54.5 | 5.3e-18 | 2.0e-14 | 53.4 |
Transcript
| Transcript ID | pfu_aug2.0_15.1_16697.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16697.t1 atggcgacgaggctaacggattcggaaatccacggtttgcagtcattcagtgttgaggacaccaataacattggtacacg atggaagcgatggctgaggtcattcgagctatatgcaggggaaaaaggggtcagtcagccggaacaaaagaaagcgctac tgttacacacggccggttccagggtacaggatatatttttcacacttactttagaacaaggtgaggaaggtgacactgca tatgacaaaactgttaaaacgcttaatagaggacgcagtccgcgccacaggcgcggacgtagccctcatcaagcgatagg aagatcttgcaataattgcaaaattgagggacattttgagttatgttgtaagaaaaaagtcaaagacgacagtcgtaaag ggaaaaaggaagtccgtcagttaactcagaatgaaccagatggggaacataaatatgcatttttggtgattcataaagta gattcgaagcgagatggtattgactcagtatgtgtcaacataggaggcatagatttgtctgcagtcatagattccggagc tacatgcaatgtgatggatcgagcgcagtgggaagatctaaagcgtcaaaatgtaatctgcacttcgacgaaggaatcaa agccgctattcgcatatggcagtaaaactccacttccggttgcgggttcgattaaagctaccgtgagagctaataattgt gagttactcgacgcagaatgcattgtgatcgaaggagatggtcaatgcttattgggtcgcgacacggcaacaaaacttaa ccttcttcgattaggaccagaagtgaatgcagtttcgggtgacggttctaccgggaagcatcctgttcttactaagtatg catccgcgttcacgggtcttggcaaactgaaggatttcaagctagaagtaccgattgatcgagattttgaacctgtagtt caacctgtgcgcagaattccgttttcgctttgcgatagacttgaacaaaagcttgatgagctagagaacttagagaacat tatcgaaaaggcgacaggccctacgacatgggtatctcctgttgtcgtgttaccgaaaggtcaagatgacattcgcatct gtgttgacatgagaaaggccaattccgcagtaaatcgcgaacggtaccccattccaactatggcagaagtgctgcaagat atgaatcatgggaaagtatttagtaaaatagacataaatcttgcctaccaccagattgaattatctgaaaattgtaggga cataactacttttgcaacccataaagggctatataggtataaaagattgatgcttggtatttcatgcgcacctgaaatgt accagaaagtgcttagtacaatattgcaagattgtgagggtgttgaaaatttcatggatgatattgttgtttatggtgaa aatgaaagtgagcacaatgttagattagagagagctattgagagattagttgagaaaggcttcacgcttaatccagacaa gtgtcagttctgtatgtcgaaaattgagtacttgggtcatgtactttctggtaagggcatatatttgcacgaagacaagg ttaaggccattatagatgctagggaacctgagagtgctagtgaagttaaaagcttccttggtttggtcaacttctgtgca aaattcattccagatttggctactatcaatgaacctttgcgaaatctaactaaaaagggggttccctttaagtggggtaa agaacagcagaaatctttcaatcttttgaaggatcacttgtcaaaggcagatacattaaggtatttcgacaagaatgctc ctactcagattattacggatgctagtccagtaggtctcgaagcggtgcttgtacagaaacaaggtcatgagttaaagaag atcctgacaataatctcaacagcactcacaatagagcaccaaattgagcatcgacgaacccctagcaagccagaggtggg accaggtgcccgggaggagtacgcatcccctgttggctag |
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Protein
| Protein ID | pfu_aug2.0_15.1_16697.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16697.t1 MATRLTDSEIHGLQSFSVEDTNNIGTRWKRWLRSFELYAGEKGVSQPEQKKALLLHTAGSRVQDIFFTLTLEQGEEGDTA YDKTVKTLNRGRSPRHRRGRSPHQAIGRSCNNCKIEGHFELCCKKKVKDDSRKGKKEVRQLTQNEPDGEHKYAFLVIHKV DSKRDGIDSVCVNIGGIDLSAVIDSGATCNVMDRAQWEDLKRQNVICTSTKESKPLFAYGSKTPLPVAGSIKATVRANNC ELLDAECIVIEGDGQCLLGRDTATKLNLLRLGPEVNAVSGDGSTGKHPVLTKYASAFTGLGKLKDFKLEVPIDRDFEPVV QPVRRIPFSLCDRLEQKLDELENLENIIEKATGPTTWVSPVVVLPKGQDDIRICVDMRKANSAVNRERYPIPTMAEVLQD MNHGKVFSKIDINLAYHQIELSENCRDITTFATHKGLYRYKRLMLGISCAPEMYQKVLSTILQDCEGVENFMDDIVVYGE NESEHNVRLERAIERLVEKGFTLNPDKCQFCMSKIEYLGHVLSGKGIYLHEDKVKAIIDAREPESASEVKSFLGLVNFCA KFIPDLATINEPLRNLTKKGVPFKWGKEQQKSFNLLKDHLSKADTLRYFDKNAPTQIITDASPVGLEAVLVQKQGHELKK ILTIISTALTIEHQIEHRRTPSKPEVGPGAREEYASPVG |
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