Gene
| Gene Model ID | pfu_aug2.0_15.1_16700 |
|---|---|
| Locus | scaffold15.1 : 190179 ... 199297 : - |
| To GenomeBrowser | scaffold15.1:190179..199297 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15.1_16700.t1 | 1 | 1 | DUF1777 | 81 | 118 | 1.2e-17 | 64.1 | 1.3e-21 | 1.9e-17 | 63.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15.1_16700.t1 | gi|675854484|ref|XP_009012802.1| | hypothetical protein HELRODRAFT_168686 [Helobdella robusta] | 1.0e-14 |
| pfu_aug2.0_15.1_16700.t1 | gi|676446519|ref|XP_009051106.1| | hypothetical protein LOTGIDRAFT_114487, partial [Lottia gigantea] | 1.0e-13 |
| pfu_aug2.0_15.1_16700.t1 | gi|325301265|ref|NP_001191647.1| | RNA binding protein yantar [Aplysia californica] | 2.0e-12 |
| pfu_aug2.0_15.1_16700.t1 | gi|602663424|ref|XP_007437343.1| | PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Python bivittatus] | 7.0e-12 |
| pfu_aug2.0_15.1_16700.t1 | gi|72020978|ref|XP_792162.1| | PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Strongylocentrotus purpuratus] | 8.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_15.1_16700.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16700.t1 atgggagctgtcatgccttgtaaaaggaaagaagatcttcaagggagagagatagaagacgtcacagaagaagtaggtca agatcaagatcacccagaagaaggtcacgagatcgacaccgttcaaggtcaaagtctcccagacacaaagacacaagaga cagggacagggacaggtataatgaaacctcatctaaatcatcacattcacaggaaggatcacatcaaagacctaaagtta aagggaaagaaggtagaggggaatgatatatactgtgcaaatataccaaagaaaaggagatataggcaatacatgaacag acgaggcggatttaacagaccattagactttattgcctga |
|
Protein
| Protein ID | pfu_aug2.0_15.1_16700.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16700.t1 MGAVMPCKRKEDLQGREIEDVTEEVGQDQDHPEEGHEIDTVQGQSLPDTKTQETGTGTGIMKPHLNHHIHRKDHIKDLKL KGKKVEGNDIYCANIPKKRRYRQYMNRRGGFNRPLDFIA |
|