Gene
| Gene Model ID | pfu_aug2.0_15.1_16701 |
|---|---|
| Locus | scaffold15.1 : 199398 ... 202122 : + |
| To GenomeBrowser | scaffold15.1:199398..202122 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | pfu_aug1.0_113813.1_49687 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15.1_16701.t1 | 1 | 1 | RVP | 314 | 414 | 1.8e-06 | 27.7 | 9.9e-10 | 4.9e-06 | 26.3 |
| pfu_aug2.0_15.1_16701.t1 | 1 | 1 | Asp_protease_2 | 320 | 405 | 1.1e-07 | 32.2 | 4.7e-11 | 2.3e-07 | 31.2 |
Transcript
| Transcript ID | pfu_aug2.0_15.1_16701.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16701.t1 atggaatctccaggggaaaatggggttatggcagcccagcaggggcaatggcaggggtacagccctgagtataatatccc atttcctggatatcaaggtcagtccctggagggagtagggactatggtagcccagcaggggcaatcgcagaggtatggcc ctggtgtatacactccgcatatggaagaaacggtttgtcataggcaaatgatgcaattgtctagttgtcacccatcctgg gatcaaggtcaagggtacgtggtacccttgcaggatgggcagtgcatgatgggttcggtaggcaatgaggccactatgat aagtccagttggtatgagttatatggggtcacatggtgaaagtgactgggatcacaggggcccggagcgtccctgtcgtg tggattcgagcagtgtatgggaggacttgaaacacggggggcacgaagcaccctcgtcgttaggagctggaccaagtttc ggatatggccctggcccgaatagaaggacacctggggagttaactgtcgtgggtagtgatggatcacagggacttggtgt gtcctatgggatgtggtctgggcaaggaataggtaatagccccgcccaattagaagtctcccccgaggtagaacctagag atccccctgtccaaaatggtgaaaggaggatgcgtagtcgtgcaccagaccgtagtgcacgctccgatagaagtcggtat tgtagtcctagccctgggtatagggaagaggtaaagagggccaatgaaggcagttcgcaagtggttggtgaatctggtaa tgaaggacatctaggtagagaatgccctgttacatgtggtcctattccctatgtaaaaggtcactcagcctcaaatgagt ctaaaggtggtgagagggttgtgaataccctccttggtgtgaacacaatggagagtgagagtaaaattcctcacgcaaga gtcaaggtcaatggcaaattagaggtcaatgccattgttggtacagggtcaagcgtaaccctaatttcaaaccgagtgta cgacaggttgtcaaggaaaccgaaggtcaagggtcatacagaattcgaaactgctagaggcagtgttatgctcacagagg agcttgaggcaatccccttaaggatggagaagtttgaaaccaagtatttggtttacaagggagatatagtgtgtgacatg atcttaggccttgatctcctatcaagagcaggtgcagttattagttttggcactagcaatgtcaaggctatggctgaaag cacacctctcagtgggtcaggtcagggtcaggtcgaccccaaggtcaatgagggtgtgaaggaggatgagtctcctcctg ttgaccctatgaaactcacccaagatagaaaccagactgaacaaagctccatggttgaccccaaggtcagtaagaatttg aaggaggatgagtctcctcctgttgaccctatgaaattcgcccaagttgttaaccaggctgaacagcaaggccttgatct cctatcaagagcaggtgcagttattagttttggcactagcaacgtcaaggctatggctgaaagcacacctctcagtgggt caggtcagggtcaggttgaccccaaggtcagtaagaatttgaaggaggatgagtctcctcctgtagaccctatgaaactc acccaagatagaaaccagactgaacaaagctccaaggttgaccccaaagtcagtgagggtgtgaaggaggaagagtgttc ccctgttgaccctacgaaattcacccaagttggtaacctggctgaacaactctcattcagacgctggtacatgtacttca gggattaa |
|
Protein
| Protein ID | pfu_aug2.0_15.1_16701.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16701.t1 MESPGENGVMAAQQGQWQGYSPEYNIPFPGYQGQSLEGVGTMVAQQGQSQRYGPGVYTPHMEETVCHRQMMQLSSCHPSW DQGQGYVVPLQDGQCMMGSVGNEATMISPVGMSYMGSHGESDWDHRGPERPCRVDSSSVWEDLKHGGHEAPSSLGAGPSF GYGPGPNRRTPGELTVVGSDGSQGLGVSYGMWSGQGIGNSPAQLEVSPEVEPRDPPVQNGERRMRSRAPDRSARSDRSRY CSPSPGYREEVKRANEGSSQVVGESGNEGHLGRECPVTCGPIPYVKGHSASNESKGGERVVNTLLGVNTMESESKIPHAR VKVNGKLEVNAIVGTGSSVTLISNRVYDRLSRKPKVKGHTEFETARGSVMLTEELEAIPLRMEKFETKYLVYKGDIVCDM ILGLDLLSRAGAVISFGTSNVKAMAESTPLSGSGQGQVDPKVNEGVKEDESPPVDPMKLTQDRNQTEQSSMVDPKVSKNL KEDESPPVDPMKFAQVVNQAEQQGLDLLSRAGAVISFGTSNVKAMAESTPLSGSGQGQVDPKVSKNLKEDESPPVDPMKL TQDRNQTEQSSKVDPKVSEGVKEEECSPVDPTKFTQVGNLAEQLSFRRWYMYFRD |
|