Gene
| Gene Model ID | pfu_aug2.0_15.1_16702 |
|---|---|
| Locus | scaffold15.1 : 246488 ... 278167 : + |
| To GenomeBrowser | scaffold15.1:246488..278167 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | pfu_aug1.0_8391.1_60423 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| aromatic-l-amino-acid decarboxylase isoform x5 | GO:0016829 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15.1_16702.t1 | 4 | 1 | Pyridoxal_deC | 23 | 136 | 0.0 | 206.7 | 4.80645e-43 | 7.0e-39 | 133.3 |
| pfu_aug2.0_15.1_16702.t1 | 4 | 2 | Pyridoxal_deC | 173 | 228 | 0.0 | 206.7 | 8.9e-17 | 1.3e-12 | 46.8 |
| pfu_aug2.0_15.1_16702.t1 | 4 | 3 | Pyridoxal_deC | 230 | 262 | 0.0 | 206.7 | 1.5e-08 | 0.00023 | 19.7 |
| pfu_aug2.0_15.1_16702.t1 | 4 | 4 | Pyridoxal_deC | 261 | 283 | 0.0 | 206.7 | 1.1e-05 | 0.16 | 10.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15.1_16702.t1 | gi|157127152|ref|XP_001661058.1| | AAEL010737-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_15.1_16702.t1 | gi|532104011|ref|XP_005337601.1| | PREDICTED: aromatic-L-amino-acid decarboxylase isoform X2 [Ictidomys tridecemlineatus] | 0.0 |
| pfu_aug2.0_15.1_16702.t1 | gi|701363534|ref|XP_010006651.1| | PREDICTED: aromatic-L-amino-acid decarboxylase isoform X5 [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_15.1_16702.t1 | gi|478528498|ref|XP_004438425.1| | PREDICTED: aromatic-L-amino-acid decarboxylase isoform 5 [Ceratotherium simum simum] | 0.0 |
| pfu_aug2.0_15.1_16702.t1 | gi|704551515|ref|XP_010179853.1| | PREDICTED: aromatic-L-amino-acid decarboxylase isoform X5 [Mesitornis unicolor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_15.1_16702.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16702.t1 atgatagattacgtagctgattacttggaaaatatcagagagaggcagccatttcctgacgtcacacctggctaccttag aagtcttatacctgaccaagcccctgaagaaggtgaaaagtatgaagacgttttcaaggacattgaaagagttataatgc caggggttactcactggcaatccccacagttccacgcctattatgcatcggccaattcctatccctctatagtagccgat attctgtcacacagccttagtcctataggctttacctgggcagcaagtccagtctctacagaactagaggttgtcatgat ggactggctgggtaaaatgttaaacttacctgaacagttcctgtctagctcaggtggtcctgggggaggggtcatacagg aagtgcaagcacaacttagcaatcatctagaaaacggcgtagagcgagaccatgtgtccagtaagactgagcatgtcgtg atagcttgtcaacccaataattacttctactcctcttatgcaacgtctttcaactttaatcctcacaaatggctgaaagt gaactttgactgctcggctatgtgggtcaaggacagtcgcctattgagtgacgcctttcagcatgttgaggtagatcctt tgtatctcaaacacgaaaatcaagagaaaatgccggattttgtggatgtgatgttggcccatgagtttgaggagtatatc aagtcagacgagaggtttgagatatttggagaggtggttatgggccttgtttgcttcagactcaagtcagacaagaggtt tgagatatttagggaggtggttatgggccttgtttgcttcaaactcaaggtcaatcagtttgagaaacatccattttgtt ttcttaaatgtgtgtatcatactccatttcagggatcaaatgaactgaatgagaagctgctaaagttgattaatgacgac aggagaatccatattgttccctccaaggtcaaggacacatactttctccgtctggcaatctgtgcttctcgtacaacgag tcaggatgttagactgacgtgggatgtaataattgagatcaccaatggcatggcaagagttgcaggatttatgccaggac ttatattgcccagggataaaaaatatattcattctgtttcaaccagaaactgtaaccaaaatgtttacaacagacagata gaaggacagacattgttaatctatagacttgtattggtttgtaatacggccaaaaaaattaagaacttgtaa |
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Protein
| Protein ID | pfu_aug2.0_15.1_16702.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16702.t1 MIDYVADYLENIRERQPFPDVTPGYLRSLIPDQAPEEGEKYEDVFKDIERVIMPGVTHWQSPQFHAYYASANSYPSIVAD ILSHSLSPIGFTWAASPVSTELEVVMMDWLGKMLNLPEQFLSSSGGPGGGVIQEVQAQLSNHLENGVERDHVSSKTEHVV IACQPNNYFYSSYATSFNFNPHKWLKVNFDCSAMWVKDSRLLSDAFQHVEVDPLYLKHENQEKMPDFVDVMLAHEFEEYI KSDERFEIFGEVVMGLVCFRLKSDKRFEIFREVVMGLVCFKLKVNQFEKHPFCFLKCVYHTPFQGSNELNEKLLKLINDD RRIHIVPSKVKDTYFLRLAICASRTTSQDVRLTWDVIIEITNGMARVAGFMPGLILPRDKKYIHSVSTRNCNQNVYNRQI EGQTLLIYRLVLVCNTAKKIKNL |
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