Gene
| Gene Model ID | pfu_aug2.0_15.1_16709 |
|---|---|
| Locus | scaffold15.1 : 370566 ... 407884 : - |
| To GenomeBrowser | scaffold15.1:370566..407884 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | pfu_aug1.0_331.1_07482 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15.1_16709.t1 | 2 | 1 | 7tm_1 | 4 | 327 | 7.0e-12 | 45.0 | 9.5e-16 | 7.0e-12 | 45.0 |
| pfu_aug2.0_15.1_16709.t1 | 2 | 1 | Lung_7-TM_R | 297 | 320 | 0.0 | 260.6 | 0.11 | 780.0 | -1.3 |
| pfu_aug2.0_15.1_16709.t1 | 2 | 2 | Lung_7-TM_R | 554 | 842 | 0.0 | 260.6 | 0.0 | 0.0 | 260.6 |
| pfu_aug2.0_15.1_16709.t1 | 2 | 2 | 7tm_1 | 743 | 743 | 7.0e-12 | 45.0 | 0.71 | 5300.0 | -3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15.1_16709.t1 | gi|344271277|ref|XP_003407466.1| | PREDICTED: protein GPR107 isoform X2 [Loxodonta africana] | 0.0 |
| pfu_aug2.0_15.1_16709.t1 | gi|593714641|ref|XP_007103804.1| | PREDICTED: protein GPR107 isoform X1 [Physeter catodon] | 0.0 |
| pfu_aug2.0_15.1_16709.t1 | gi|556775284|ref|XP_005982763.1| | PREDICTED: protein GPR107 [Pantholops hodgsonii] | 0.0 |
| pfu_aug2.0_15.1_16709.t1 | gi|149642621|ref|NP_001092634.1| | protein GPR107 [Bos taurus] | 0.0 |
| pfu_aug2.0_15.1_16709.t1 | gi|742189658|ref|XP_010855101.1| | PREDICTED: protein GPR107 [Bison bison bison] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_15.1_16709.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16709.t1 atgaacgcgtcttcctctgtagtacttctagggatcgctgtggatcgcttcattggtatctggtgttccgtaagaacaaa gccgttcggaatatctcgagcaaaaggaaccatattgctggccctttttatagctttaatcacgtgttggccagctcttg tgttatttggaagtcaaacagtcatggtgtcagggatagagaccaaaacatgtgggatagacaacaaattcatgggtgaa acactaagaaagtaccccttgatatatggaatgtacctaatgggttcaaatgtgatagttgactctgtttttatcatcat ttattcactaataggtagcaaaatctatagaagaagacgttttggaagtagtacgcaaactgtgcgagcaccgacctctt tcattttcaacaaaaaaagaccaagtgtttattcgtgtacaagctcaactttctatgacgaggaaacgacgtcattaaca agtgctagcaggaataagatcaattttgtggcaaggttggtgaaagaggacggaatgaatggttccgacactaccttaca acgttacggatctctgagacgaagcttcaagtcccgttgtaaatttccgagtactcactccgtccctgaagacgaaattg tcaatgtcaaactaaacgagacaaataatgaaaaacaaaagttccttgatgttgctcgtccgataaggtctgctagtctg ccgaattgcaatatgatagttcacaaagacaaatcaaatggctctaccaaaataaggacttggaatttccgaagccttcc ccgcacagtgtccaatgtaagccatgcatctagtacggaaaataatgccataggacgttatggcagaacatatcacaccg ggaagaccacttttatgcttttcctggtcactctagcgtatatattgacattcgttccttattgtattatctacattctc agaatttctaatgataattactatgccaatcaactttcactttatgttgtgcattcggctgccaacatggaagcgatgag actggggaagaaaaagtttattgtcttaactatcctttgtttgttagcagaggggagaattcacaaattagagttacagg atgatgacaggaaggaaatacagctcagtacgtttggtttcttcaagaaagggacacttgatgtcaatgtcactgcattc cgttactatacagacaaaccaaaaaaggatgatctgtttggctttacccttgacaagagtggaagcagtggaatttcttc atatttgatgaagaactccaataagcaatgtattctgaagagtctaccccaatctgcagataaaaatttggccatcgtgt tattccgaatgcatcttggagctgataaaaaagtggtgattatagaaaagtcaggcaaagacttgctccacttagatata tctgatacatctagaaagccgcccaaagtacaaccaaaggccaccaaaaaggcatctgccttcagtgacaagagtctgat acaacatccaggctcaaagaaaatcaccgagcccattccaaaggctaaccaacaggacaaaaagcccagtcaagtagcac ggcggtccgttaccgaagtaccaccgagtccaaaatttaaggtacaaattctgcatgatgaagaggagggactgtacaat ttatatttccacaattgtttgaattacaaagctgaatcagcctcaaaatttgacttggatattgagataatagaacagaa tgaagataattacctatcagcgggggaaattcccgagtcttatttgttttttgcctttgctgctgtgtatttgggtgttg gaatattctggatggttgtcctaaggcgtatgaaggaagatgtctataagatccattatctgatgtttgctgtcatcatc gtcaaaagtttggcttgtctcttccatgcagtagacatgcattttatatcaacagagggtttccatgaagaagcttgggc ggtgttatattatattgtatatctatctagaggagccttgctgtttgtgacgatcattttgattggtgcaggttgggctt tcatcaaacatgttctttcagacaaggagaaaaaagtctttctaattgtcattccactacaaatacttgacaacatagca tacatcatactagaggagagtgaggaggggcagactcagtacgtcctgtggcaggaaatatttatctttgtagatttgtt ctgttgtggtgctatactcttccctgtcgtatggtcaatacgacatctccatgaagcctcccggacagatggaaaggctg ctatcagtctccttaaattaaaattatttagacaattttatattctgattgtgtgttacatatactttacaagaattatt gtttacctagttaggataacagtaccgtttcagtatgagtggttagatgagttatttagggaacaagctacgtgtgcttt cttcgttattactgggtacaagttcaggccggccccggacaacccgtatctacaggtaccgcaggaagacgaggatgaag aggttgaaatggatgaagttgtaacaaaatcaggagcgtttgacaatatcacacgagtcaacaaagggaagtctacagag gagacgggtctcaaacaaagggagaatagtcatgaatgtacatgtactgttagaaattcaatcaaatttactgagcaact tacctacagtgagagggaacttacaaaaaataaatcatcaactacatgtactgccattcacacttgttgtcttttgacat tatttgaagtctaa |
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Protein
| Protein ID | pfu_aug2.0_15.1_16709.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16709.t1 MNASSSVVLLGIAVDRFIGIWCSVRTKPFGISRAKGTILLALFIALITCWPALVLFGSQTVMVSGIETKTCGIDNKFMGE TLRKYPLIYGMYLMGSNVIVDSVFIIIYSLIGSKIYRRRRFGSSTQTVRAPTSFIFNKKRPSVYSCTSSTFYDEETTSLT SASRNKINFVARLVKEDGMNGSDTTLQRYGSLRRSFKSRCKFPSTHSVPEDEIVNVKLNETNNEKQKFLDVARPIRSASL PNCNMIVHKDKSNGSTKIRTWNFRSLPRTVSNVSHASSTENNAIGRYGRTYHTGKTTFMLFLVTLAYILTFVPYCIIYIL RISNDNYYANQLSLYVVHSAANMEAMRLGKKKFIVLTILCLLAEGRIHKLELQDDDRKEIQLSTFGFFKKGTLDVNVTAF RYYTDKPKKDDLFGFTLDKSGSSGISSYLMKNSNKQCILKSLPQSADKNLAIVLFRMHLGADKKVVIIEKSGKDLLHLDI SDTSRKPPKVQPKATKKASAFSDKSLIQHPGSKKITEPIPKANQQDKKPSQVARRSVTEVPPSPKFKVQILHDEEEGLYN LYFHNCLNYKAESASKFDLDIEIIEQNEDNYLSAGEIPESYLFFAFAAVYLGVGIFWMVVLRRMKEDVYKIHYLMFAVII VKSLACLFHAVDMHFISTEGFHEEAWAVLYYIVYLSRGALLFVTIILIGAGWAFIKHVLSDKEKKVFLIVIPLQILDNIA YIILEESEEGQTQYVLWQEIFIFVDLFCCGAILFPVVWSIRHLHEASRTDGKAAISLLKLKLFRQFYILIVCYIYFTRII VYLVRITVPFQYEWLDELFREQATCAFFVITGYKFRPAPDNPYLQVPQEDEDEEVEMDEVVTKSGAFDNITRVNKGKSTE ETGLKQRENSHECTCTVRNSIKFTEQLTYSERELTKNKSSTTCTAIHTCCLLTLFEV |
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