Gene
| Gene Model ID | pfu_aug2.0_15.1_16712 |
|---|---|
| Locus | scaffold15.1 : 509304 ... 512241 : + |
| To GenomeBrowser | scaffold15.1:509304..512241 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | pfu_aug1.0_3527.1_08653 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15.1_16712.t1 | 1 | 1 | Myb_DNA-bind_4 | 15 | 114 | 5.8e-06 | 26.3 | 2.9e-09 | 1.1e-05 | 25.5 |
| pfu_aug2.0_15.1_16712.t1 | 1 | 1 | MADF_DNA_bdg | 22 | 112 | 9.1e-12 | 45.0 | 4.3e-15 | 1.6e-11 | 44.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15.1_16712.t1 | gi|350423097|ref|XP_003493384.1| | 1.0e-09 | |
| pfu_aug2.0_15.1_16712.t1 | gi|749777246|ref|XP_011143488.1| | PREDICTED: uncharacterized protein LOC105185577 [Harpegnathos saltator] | 3.0e-09 |
| pfu_aug2.0_15.1_16712.t1 | gi|241804718|ref|XP_002414542.1| | hypothetical protein IscW_ISCW013778 [Ixodes scapularis] | 1.0e-08 |
| pfu_aug2.0_15.1_16712.t1 | gi|512896776|ref|XP_004923991.1| | PREDICTED: uncharacterized protein LOC101746935 isoform X2 [Bombyx mori] | 5.0e-07 |
| pfu_aug2.0_15.1_16712.t1 | gi|449680183|ref|XP_002167661.2| | PREDICTED: uncharacterized protein LOC100204765 isoform X1 [Hydra vulgaris] | 1.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_15.1_16712.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16712.t1 atgtcgaggctgataaagaagcacaaagaaaatttacaactatccagtgaagaggtgactcgcttgatagaatggtacaa atcagaaccgtgtttgtgggacgtccatgtatcatctatttgttcaaaagaaaaaaggtcacagataatagaaaggatta gaagaaaacttatcacggagttcggaatagaatgtacagctgatcaggttaagggcaaactgacgtatctaaggggatat tactcaagagaactaatgaaggaaaataggtcaaaagctatgaatgctggagatgtcaaggtctactgcagtcaatggcc gttcttcaaggacttggatgagtttcttagggaccaaatcacgcctaggtctacctacatgtattccaacacgatggctg tcagcagtcactcagatgacgtcgtggtggaaatggacatagcagacgactcgtcaggtttgtcggtattttcaaacgaa gaccagacagaggctccacctaccaaaaggtcaaggtcgaatgtttctgatccagtgattgtacattatggaacagtcga gaaacatgatgaaagcgaagacgaggacgtcattttcggaaagtacgtgacgtcagaattgaagaaactcacaaatccac gcgagagagcactggcgaaatttagaattcaaaaacttttctttgaaatgcaatttggatcacaaccagaggaaacaaga acaaataaatgtcaaacagaaaaagtagaaaatggctga |
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Protein
| Protein ID | pfu_aug2.0_15.1_16712.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16712.t1 MSRLIKKHKENLQLSSEEVTRLIEWYKSEPCLWDVHVSSICSKEKRSQIIERIRRKLITEFGIECTADQVKGKLTYLRGY YSRELMKENRSKAMNAGDVKVYCSQWPFFKDLDEFLRDQITPRSTYMYSNTMAVSSHSDDVVVEMDIADDSSGLSVFSNE DQTEAPPTKRSRSNVSDPVIVHYGTVEKHDESEDEDVIFGKYVTSELKKLTNPRERALAKFRIQKLFFEMQFGSQPEETR TNKCQTEKVENG |
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