Gene
| Gene Model ID | pfu_aug2.0_15.1_16717 |
|---|---|
| Locus | scaffold15.1 : 597214 ... 634473 : + |
| To GenomeBrowser | scaffold15.1:597214..634473 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | pfu_aug1.0_24.1_50552 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15.1_16717.t1 | 3 | 1 | FH2 | 524 | 746 | 0.0 | 240.4 | 3.20001e-41 | 4.7e-37 | 127.7 |
| pfu_aug2.0_15.1_16717.t1 | 3 | 2 | FH2 | 775 | 943 | 0.0 | 240.4 | 5.2e-34 | 7.7e-30 | 104.0 |
| pfu_aug2.0_15.1_16717.t1 | 3 | 3 | FH2 | 947 | 1041 | 0.0 | 240.4 | 4.7e-06 | 0.07 | 12.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15.1_16717.t1 | gi|676445859|ref|XP_009050890.1| | hypothetical protein LOTGIDRAFT_158968 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_15.1_16717.t1 | gi|291243578|ref|XP_002741679.1| | PREDICTED: formin-F-like [Saccoglossus kowalevskii] | 9.0e-36 |
| pfu_aug2.0_15.1_16717.t1 | gi|390347823|ref|XP_003726874.1| | 5.0e-34 | |
| pfu_aug2.0_15.1_16717.t1 | gi|470292123|ref|XP_004343560.1| | hypothetical protein CAOG_07686 [Capsaspora owczarzaki ATCC 30864] | 1.0e-32 |
| pfu_aug2.0_15.1_16717.t1 | gi|260805571|ref|XP_002597660.1| | hypothetical protein BRAFLDRAFT_121697 [Branchiostoma floridae] | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_15.1_16717.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16717.t1 atgatgtcggaacaaggggatttagttgtttccagggcaactcataattttggaatatttcgaaaatctgggaaaagagc aatattccagatcgattttttatccagcaaaataaagatcatacaacgcggaagtgtaaaatacacgtatgacttcgatc aactcatacagtatgactcagaggaaggattgaccatctcagtaaagctcggacacaaagatctggagtttgacgccggt aacacagaggaaaagcttacaatctgtagtctattaggaatcgtcaagggaggggaattgacgtcacaacaagttcagca ggcagagaagcaagaagcagaggaccatccgagttctataaggcgcagaccggcttcggtaatcaaagaaggagttctcg agaagaaagggcatgcagccatacaagtttggagcaaacgtcgagtaaaaatatcccccggggaactatcttacttcaag ccagatgacgagattgcactcaacattgtacagttgtctgcggataagtacatgatgaaaccagtcggcaataatggatt cgttctgattgtatcagatagaaaatatcagcattcaaccaagcatgttgccagcgacgtaaaactgtattgctgctgga gcaaggaatgccgaatagaggaacctgaaagtaaccaacgtctaagtcagattgtgcagagaacagagttactagagaac gttacaaagcaccgcccaaaaaagatgtccagtaaaggcagccgaaaactatccgagcagcaatcgacagatgactttaa ccaacatgaccaattggaagaacaatcagaggaatccagtgatacgagctcgaagagtgagggaaacaactctaataaca gaggatcgcaacgttcgacgaactctagtggaaaatcagttgtgtctattgacaacgaattcccggaaacaattgacaca agcaatcagagcgattctgtaagaaacatttcatcaccaccacttacgtcatcagaatgtgatcagtgtcatactgcaac ccagattttgaaggacaacgttcataaggagtggctatctcccgaagacgaaccggacaaatatgaagatgatgtaattt atgaaaacattcaggcctgtagagctcagaaagaaggtgtccaactgcctgatccgaaagttgacaatacaaagaacggt gcgagtatcaatgatggaagtgaaaatcatatagcagacgacagtgtacgggaaacacaatcagagtcgggcaagaaaaa tgatataagaatttcacagattagacagaatgacacagaaaaagaacatatggaaacaggaaacaaagataataaaggcc aagtcagagtttctataaatcaaaacaaagagattgaagatgatcacaagtgtagcacttttgaacaaattcgggaaaag tttaacgtcactaatactgaacaaggaatgaaactgcctaaccaacaggagcaaaacgaaattacaaatgttccggaagc gcctccaccccctccctctttaccccctccaccacctccgatccatcaacaaggagagagaaagtacaggacacttcatt ggacaccggttcacaagagtcagataaaagggtcagtttggaaaaatacaaaggacgtaaccacgacgttagacgagaat cttcttcaagaaaacttcagcattcagaaacacaatgccatgaaatttacaggagatcaagacgagaaaaaagttttact ggattctcgtcgagctaggaatcttgccatcattctcaatggtctgaaatctgacaaggcgtgcagcatttacgacatcc tcaactcagtgaaagaggacgattcgtttccggcagagaaacttacaaccatcagacgataccagccaacttctgacgat atagaggtttacaagttatacgcggatagaaaggaaatgttggatcccgttgatcagtttatgtacgaactttgcgaaat tcagtgtcttagccttagacttgactttgttctactcctttgggatttcccgagacaactgaaatgttcaacacaggcag tagagaagatcatggcagcctgtgaccaactgatgtccagtcagcagctagtaggtgttctaagctacattcttgccata ggaaattacttatcgtcgaagaacaacgatgaaaaaggatgtgtaggattcaaattgtcgtccctaggaaaggtgaaggt ggatagtgatttacagggatggacggataagctgtcgtgtgtccatgattgtgagggattgtcagtccccgctgtgtcta ctgaaattgaagacgagaaaaaagttttactggattctcgtcgagctaggaatcttgccatcattctcaatggtctgaaa tctgacaaggcgtgcagcatttacgacatcctcaactcagtgaaagaggacgattcgtttccggcagagaaacttacaac catcagacgataccagccaacttctgacgatatagaggtttacaagttatacgcggatagaaaggaaatgttggatcccg ttgatcagtttatgtacgaactttgcgaaattcagtgtcttagccttagacttgactttgttctactcctttgggatttc ccgagacaactgaaatgttcaacacaggcagtagagaagatcatggcagcctgtgaccaactgatgtccagtcagcagct agtaggtgttctaagctacattcttgccataggaaattacttatcgtcgaagaacaacgatgaaaaaggatgtgtaggat tcaaattgtcgtccctaggaaaggtgaaggtggatagtgatttacagggatggacggataagctgtcgtgtgtccatgat tgtgagggattgtcagtccccgctgtgtctactgaaattgaagtgttacggtgcgatttgacaaccttgaagaaaaattt gaaagttttgaaaggcaaactaaagaaaccaacggacaaagagaaggaatttttcaatacagcccaggcaatgttacttg aaatggaatcgacggtcaacaaactggacaaaatgggttcacaagtccagacaaagtatagacgcacattggtaatgtat cataaaattttatctactacaggcgctaagtacgttatcagaataacagcttag |
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Protein
| Protein ID | pfu_aug2.0_15.1_16717.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16717.t1 MMSEQGDLVVSRATHNFGIFRKSGKRAIFQIDFLSSKIKIIQRGSVKYTYDFDQLIQYDSEEGLTISVKLGHKDLEFDAG NTEEKLTICSLLGIVKGGELTSQQVQQAEKQEAEDHPSSIRRRPASVIKEGVLEKKGHAAIQVWSKRRVKISPGELSYFK PDDEIALNIVQLSADKYMMKPVGNNGFVLIVSDRKYQHSTKHVASDVKLYCCWSKECRIEEPESNQRLSQIVQRTELLEN VTKHRPKKMSSKGSRKLSEQQSTDDFNQHDQLEEQSEESSDTSSKSEGNNSNNRGSQRSTNSSGKSVVSIDNEFPETIDT SNQSDSVRNISSPPLTSSECDQCHTATQILKDNVHKEWLSPEDEPDKYEDDVIYENIQACRAQKEGVQLPDPKVDNTKNG ASINDGSENHIADDSVRETQSESGKKNDIRISQIRQNDTEKEHMETGNKDNKGQVRVSINQNKEIEDDHKCSTFEQIREK FNVTNTEQGMKLPNQQEQNEITNVPEAPPPPPSLPPPPPPIHQQGERKYRTLHWTPVHKSQIKGSVWKNTKDVTTTLDEN LLQENFSIQKHNAMKFTGDQDEKKVLLDSRRARNLAIILNGLKSDKACSIYDILNSVKEDDSFPAEKLTTIRRYQPTSDD IEVYKLYADRKEMLDPVDQFMYELCEIQCLSLRLDFVLLLWDFPRQLKCSTQAVEKIMAACDQLMSSQQLVGVLSYILAI GNYLSSKNNDEKGCVGFKLSSLGKVKVDSDLQGWTDKLSCVHDCEGLSVPAVSTEIEDEKKVLLDSRRARNLAIILNGLK SDKACSIYDILNSVKEDDSFPAEKLTTIRRYQPTSDDIEVYKLYADRKEMLDPVDQFMYELCEIQCLSLRLDFVLLLWDF PRQLKCSTQAVEKIMAACDQLMSSQQLVGVLSYILAIGNYLSSKNNDEKGCVGFKLSSLGKVKVDSDLQGWTDKLSCVHD CEGLSVPAVSTEIEVLRCDLTTLKKNLKVLKGKLKKPTDKEKEFFNTAQAMLLEMESTVNKLDKMGSQVQTKYRRTLVMY HKILSTTGAKYVIRITA |
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