Gene
| Gene Model ID | pfu_aug2.0_15.1_16720 |
|---|---|
| Locus | scaffold15.1 : 680229 ... 707773 : - |
| To GenomeBrowser | scaffold15.1:680229..707773 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | pfu_aug1.0_24.1_50555 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15.1_16720.t1 | 2 | 1 | MAM | 28 | 59 | 2.4e-06 | 27.4 | 3.8e-09 | 1.4e-05 | 24.9 |
| pfu_aug2.0_15.1_16720.t1 | 6 | 1 | Kringle | 69 | 140 | 0.0 | 227.5 | 5.2e-24 | 1.9e-20 | 72.7 |
| pfu_aug2.0_15.1_16720.t1 | 6 | 2 | Kringle | 150 | 219 | 0.0 | 227.5 | 5.0e-22 | 1.9e-18 | 66.3 |
| pfu_aug2.0_15.1_16720.t1 | 6 | 3 | Kringle | 231 | 299 | 0.0 | 227.5 | 3.0e-19 | 1.1e-15 | 57.4 |
| pfu_aug2.0_15.1_16720.t1 | 4 | 1 | EGF | 270 | 283 | 7.7e-07 | 28.9 | 0.99 | 3700.0 | -2.0 |
| pfu_aug2.0_15.1_16720.t1 | 4 | 2 | EGF | 304 | 333 | 7.7e-07 | 28.9 | 2.1e-10 | 7.7e-07 | 28.9 |
| pfu_aug2.0_15.1_16720.t1 | 6 | 4 | Kringle | 318 | 336 | 0.0 | 227.5 | 0.46 | 1700.0 | -0.9 |
| pfu_aug2.0_15.1_16720.t1 | 2 | 2 | MAM | 343 | 376 | 2.4e-06 | 27.4 | 0.46 | 1700.0 | -1.4 |
| pfu_aug2.0_15.1_16720.t1 | 6 | 5 | Kringle | 348 | 412 | 0.0 | 227.5 | 2.3e-06 | 0.0084 | 16.1 |
| pfu_aug2.0_15.1_16720.t1 | 6 | 6 | Kringle | 424 | 489 | 0.0 | 227.5 | 5.6e-15 | 2.1e-11 | 43.7 |
| pfu_aug2.0_15.1_16720.t1 | 4 | 3 | EGF | 436 | 441 | 7.7e-07 | 28.9 | 1.1 | 4200.0 | -2.2 |
| pfu_aug2.0_15.1_16720.t1 | 4 | 4 | EGF | 459 | 472 | 7.7e-07 | 28.9 | 0.91 | 3400.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15.1_16720.t1 | gi|700352601|ref|XP_009920512.1| | PREDICTED: plasminogen [Haliaeetus albicilla] | 0.0 |
| pfu_aug2.0_15.1_16720.t1 | gi|1046359|gb|AAC48522.1| | apolipoprotein(a), partial [Erinaceus europaeus] | 0.0 |
| pfu_aug2.0_15.1_16720.t1 | gi|524991615|ref|XP_005043669.1| | PREDICTED: plasminogen-like [Ficedula albicollis] | 0.0 |
| pfu_aug2.0_15.1_16720.t1 | gi|704463331|ref|XP_010084989.1| | PREDICTED: plasminogen [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_15.1_16720.t1 | gi|683926569|ref|XP_009093496.1| | PREDICTED: plasminogen-like [Serinus canaria] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_15.1_16720.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16720.t1 atgtcaaatcctcgaattccaggagataaggcacaacttgtcacagacattgaattaccgagtcatgatggaaaaaacat taacctatttcagataataatagaagcaatccgtggtaacagctgggatagtgatatcgcaattgatgaaatcgcactaa ctagtggaaaatgcgaagatgcaaaaccgagagaatgtttgcaaacatcgactggttcagattataaagggactctgaat attacaaaaaatggagatatatgtcaagcttggatttctcaaactccacacaaacatgacgagtataccgacctagaggg gaatttctgtagaaatcctgatcccggcgattctcaagcaccttggtgttatacaatgaataagaacataacatgggact attgtatcatacctcattgtgagagcgaaaactgtcgccggtctgatatagggtatgagtatgacggagttatccatacg actgtatcaggcaaagaatgtcaacgatgggatagtgttacgccacataaccacacgtacagccacttgagcgcccatga aaatttttgtcgaaacacatttggtagtaaaatgcggccatggtgttatacgacagataaagatctagaatgggatttct gcgatatcccaaagtgtggttctaagcctagggaatgtgcactgacggctataggatatgattattttggaagcaaaact caaacaagtgacggattggcatgtcaaggatgggatagcatgaagcctaatttccatgagtttggtgacatgaaggagca gacgaacttttgtagaaacccaaactggaatgaagaaccatggtgctttaccaagaacgcttctgttgaatggggatctt gcgatatacctttatgtgatgaggaaatgtgtgcctcgttgccttgtcagaatggcggaacatgtattccaaacggggat tcgtatacctgccaatgctacaaatcatatacaggacgtgattgtgaagaatcggttgtagagaacacgcttgaatgtct gatgacgagaaatggtcgtgagtatcaaggaactatgaattttacccgaaccggtcagctatgtcgtaactggaaggata ctcaatatgctgatagttatggtgaccaagggaactactgcagatatttcaatacaaatgaaattatgtgcgagactaac aaaggagatttggagatctgtgatgttcctcactgtcaaacaacgccttcggaatgctcagatactctcaagggtgaacg atatttcggtactatcaacatagacgagaatgggtacatgtgtagaagatgggacacagacaaggattacatggatcatc agactgaggagaattattgcagaaaccctggtggacatggagaacgtccatggtgcctcagagaaaattctgaagatgaa tggggatattgtgatattcctgcatgctaa |
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Protein
| Protein ID | pfu_aug2.0_15.1_16720.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15.1_16720.t1 MSNPRIPGDKAQLVTDIELPSHDGKNINLFQIIIEAIRGNSWDSDIAIDEIALTSGKCEDAKPRECLQTSTGSDYKGTLN ITKNGDICQAWISQTPHKHDEYTDLEGNFCRNPDPGDSQAPWCYTMNKNITWDYCIIPHCESENCRRSDIGYEYDGVIHT TVSGKECQRWDSVTPHNHTYSHLSAHENFCRNTFGSKMRPWCYTTDKDLEWDFCDIPKCGSKPRECALTAIGYDYFGSKT QTSDGLACQGWDSMKPNFHEFGDMKEQTNFCRNPNWNEEPWCFTKNASVEWGSCDIPLCDEEMCASLPCQNGGTCIPNGD SYTCQCYKSYTGRDCEESVVENTLECLMTRNGREYQGTMNFTRTGQLCRNWKDTQYADSYGDQGNYCRYFNTNEIMCETN KGDLEICDVPHCQTTPSECSDTLKGERYFGTINIDENGYMCRRWDTDKDYMDHQTEENYCRNPGGHGERPWCLRENSEDE WGYCDIPAC |
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