Gene
| Gene Model ID | pfu_aug2.0_150.1_00321 |
|---|---|
| Locus | scaffold150.1 : 147876 ... 163159 : + |
| To GenomeBrowser | scaffold150.1:147876..163159 |
| Genes list of scaffold | scaffold150.1 |
| Synonym | pfu_aug1.0_9800.1_53424 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_150.1_00321.t1 | 1 | 1 | TTL | 69 | 332 | 0.0 | 177.4 | 0.0 | 0.0 | 176.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_150.1_00321.t1 | gi|676431836|ref|XP_009046380.1| | hypothetical protein LOTGIDRAFT_110692, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_150.1_00321.t1 | gi|524902483|ref|XP_005107488.1| | PREDICTED: tubulin polyglutamylase TTLL4-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_150.1_00321.t1 | gi|260836981|ref|XP_002613484.1| | hypothetical protein BRAFLDRAFT_208506 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_150.1_00321.t1 | gi|260836983|ref|XP_002613485.1| | hypothetical protein BRAFLDRAFT_208219 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_150.1_00321.t1 | gi|645015861|ref|XP_008211236.1| | PREDICTED: tubulin polyglutamylase TTLL4 isoform X1 [Nasonia vitripennis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_150.1_00321.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_150.1_00321.t1 atgtgtcagactgttaacaataatttatatctttgtatttcagttggagacaggatacctgaattggagacagggtactt gaagcatgtgtttgctgtatttgacagactgggatatactgtcggcgactctaagtcagactgggacgtactttggtcac atgagtatccattcgaagccctggccaaacaaatatcagcattgaaacctcatcaaaaagtaaatcatttcccagcgtct gggtacatcactaacaaagtcagtctagtcacctcccccaatcagtacattccgagagctttcaagattccagaagaaaa aaagaaattcctttcctatgctaaaaacaatccagagaaattatgggttcagaaaagaaacagtcatagaggcatcaaga ttaagcgtgtgaaagatttggacttacaggatgaatcatcttttattcaggaatatgtagaccgaccatttcttattgat ggaaggaagtttgacattggtgtatacgcaatcctgacatctatagatcctctgagagtgtacatgctggaaaatgatgc actttttaggttctgtagccatgactaccatccatttaaccctaaggacgtcaagaaatacgttgttggtgatgattaca ctcctgtgtggcatatgccctcattgaaagttctatacaaccatctagaatccaactttaaggttacctttgacacctat cttaaaagtgtcggaaaggaccctcataagatgtggaatgacatacgtacagctataaactctgtatacctctctaaaga accatatctgattggggctgccaggaaatataaatcaacaaggaatttctttgagatggtgagatttgattttgtactgg atgaggagctaaacgtctacttgatggaggtaaacatgtcaccaaatctgtcatcaggccactttgagggtaacacactc ctgtatgagcaggttatctttaatttactaagtctggtgggtgtgtcaagaccagttaccaatgacttcagtaacagtcc agacaaggaggcagatatgagggtgtcggacaaggatatcaccgtgtttcctgaatggtgtatacaaaaacgctgcttac gggactgtaaagccccgagatgccagatgtgtcaccagtgttatactatggagatgaagaaaacattaaagtatgcagtt ctagagcatattaacaaaggacagtgtaccagggtgttccctccccctatgtcgcaagaacaagccttagattggacacc ggaagatgcttctgaaatttttcagcagatgagtcggaaaaaccagcttatgtcaatgtggctttatggctttatagatt atgccattcagtgttttgtttgctcatttacatag |
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Protein
| Protein ID | pfu_aug2.0_150.1_00321.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_150.1_00321.t1 MCQTVNNNLYLCISVGDRIPELETGYLKHVFAVFDRLGYTVGDSKSDWDVLWSHEYPFEALAKQISALKPHQKVNHFPAS GYITNKVSLVTSPNQYIPRAFKIPEEKKKFLSYAKNNPEKLWVQKRNSHRGIKIKRVKDLDLQDESSFIQEYVDRPFLID GRKFDIGVYAILTSIDPLRVYMLENDALFRFCSHDYHPFNPKDVKKYVVGDDYTPVWHMPSLKVLYNHLESNFKVTFDTY LKSVGKDPHKMWNDIRTAINSVYLSKEPYLIGAARKYKSTRNFFEMVRFDFVLDEELNVYLMEVNMSPNLSSGHFEGNTL LYEQVIFNLLSLVGVSRPVTNDFSNSPDKEADMRVSDKDITVFPEWCIQKRCLRDCKAPRCQMCHQCYTMEMKKTLKYAV LEHINKGQCTRVFPPPMSQEQALDWTPEDASEIFQQMSRKNQLMSMWLYGFIDYAIQCFVCSFT |
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