Gene
| Gene Model ID | pfu_aug2.0_150.1_00325 |
|---|---|
| Locus | scaffold150.1 : 244571 ... 268567 : - |
| To GenomeBrowser | scaffold150.1:244571..268567 |
| Genes list of scaffold | scaffold150.1 |
| Synonym | pfu_aug1.0_3638.1_23375 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| exportin-5 isoform x3 | GO:0005515 GO:0005654 GO:0005737 GO:0006611 GO:0010467 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_150.1_00325.t1 | 3 | 1 | Xpo1 | 66 | 228 | 2.6e-22 | 79.3 | 6.9e-26 | 2.6e-22 | 79.3 |
| pfu_aug2.0_150.1_00325.t1 | 3 | 2 | Xpo1 | 277 | 295 | 2.6e-22 | 79.3 | 0.17 | 640.0 | 0.1 |
| pfu_aug2.0_150.1_00325.t1 | 3 | 3 | Xpo1 | 512 | 546 | 2.6e-22 | 79.3 | 0.43 | 1600.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_150.1_00325.t1 | gi|593722865|ref|XP_007107639.1| | PREDICTED: exportin-5 isoform X3 [Physeter catodon] | 0.0 |
| pfu_aug2.0_150.1_00325.t1 | gi|694916571|ref|XP_009449601.1| | PREDICTED: exportin-5 [Pan troglodytes] | 0.0 |
| pfu_aug2.0_150.1_00325.t1 | gi|119624611|gb|EAX04206.1| | exportin 5, isoform CRA_a [Homo sapiens] | 0.0 |
| pfu_aug2.0_150.1_00325.t1 | gi|12407633|gb|AAG53603.1|AF271159_1 | RANBP21 [Homo sapiens] | 0.0 |
| pfu_aug2.0_150.1_00325.t1 | gi|22748937|ref|NP_065801.1| | exportin-5 [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_150.1_00325.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_150.1_00325.t1 atgtgtgtacctgttggtctatttctggcacagaccgtacataaacctatcgttaggcattttggtttgcagttattgga acatgttataaagtttcgatggaacgatatgacacaggaccaaaaagactacctgaaagaaaatgcattggagcttatag cagtaggaacccgtaatttgctggaagaagagttccatataaaggatgcagtatcaaggattactgtagaactgataaag agagaatggcctcagctgtggcctaacctacagcaggatctgtatagactcagtcagaaaggggaaacccagacagagtt ggtgttgaagatttatctgagggttgtagaggatgctgtgctgttccagaccatacccaatcagagacggagagaaataa tgctggccctcacatccaacatggacgacctcttcagcttctttgttacagtgttaaaagaacacactgatgctgtagat caaatacaaaagtctggacaaacagttgatcccaaggtgattcaggaacacaacatggccagtgaggcagctctgtgtac attggctggttaccttgactgggtccacatgcagcatatcatggcaaaaaacgctctgctgctccagatgacctgtctgc tgcttagcaacagtagtctgcaactttatgctgcagagtgtctccatattattgttagtagaaggggaaaattggaagat aggaagcctcttctggttctcttcagtgaagatgccatgaatattgttcttcgtacagtagcggatgcagaggctgcctc ctctacagatgagtactactacctgttccttaagaagctctgtctactgctggtggaacttggtaaacagctggcagctt tatggggaaacctaccagaagttggccaacctcagaatttttccacctacctagaggctgtatttgcctttacacagcat ccaagcaggatgctgtgtagctacacacagcctttatgggcgttatttttccgacatgatcacatgtccaaagatcctat actcttgtctttcatcccaaggttgatccaggggacacatagcacacttgtcaaggctggattccctacacagaataaca gtccaagctgtgaatattccagacatgattttgacagtgatgatgactttcatcaattcttgttaaaattgaggtcagaa atctcagagacgttacgtcttgcggcagttttacagccttcaccagctatagcttatgcttttgattggttgaaatcaca gctcacaaaacctattgatacaggaggaggaaaggattattgtaccctgttttctccgtctttcctggaatgggatgcca tgacagtatgtttggagtgtgtgattagtaaactctccaaccctaaatctataccagaattaagtactggtgtactactg ttaaatgaagtgctaaattatcagactcagatattttctgctgtaacgttcaaccaagaaggtcagacaaagtccacacg gagtagagccgttaaaaatgtacgacaacatgcctgctctatattggtcaaaatgtgtaaacaatatgctgatctcatct ttccagtatttgatcagctgtacagccatatcaaaactatcagcagtgatgcagagggacttagtcagatggaaaaatgt atactgatggaagctctcatactcataagcaacaagagcaataacttcatgaagcagtcagagtttcttgaagaaatact cagaccagtgaaggaatattatttgtccaaagaattcacagaagcattctgggatcctgagaagtggatgtcctttattg gtttagaccaagctcctgtcgagcctagctctgctgatacatgtggtataaataggtcccgtatatgttactgtacaaac atgatattggctgtactaaaaaggagtaaatggccagaggaggcccaggctgcagaagagggaggatttatgatcggaaa gagagatgacagcacacctatatttagaaaccctgccacaagtcatattagtctgttactagaaaacctcctggctttta tgaaaacaatgaatgcagtatggcagcctcagtatttacaaaaacggcatcctgccttttcacggacgtatgaattattg gaaaatgaaaaattagcaatattaggtatgccagctccatgtgtagatataacagtcaaccagaataaacttccgtcaga cagaatgcaaaacttcattgtcactacaaatgataataatgtggaaggagcagaagataacatggaggcccaagaagtga tagaggatcaacttacacgacaactcaacagagaatatatggaactactggccactgcacttcatatgaggagaaacgag gttgtagccaatgtagaggaagacagaatggatgatatagagaatcctagtgctgtacagaaagaggaggtggcattgtc caaactcggatgtctctgtatgttaaataagtctgtctatccatccatcatgatgtacgtcttcagtgcgttaacgtgga cagattatgtggcatgccttagaggatgtaacttagcctgctctatgatgaaacagttggttgccaatggtgacgctaca tcagacattgccggcagctttttctatcaggtattgtgtgggttacaggtgcatggacagcatgaagggtcacagtcttc attgctgaatttggccctcaaactctatgaacttttgagacctgcattcccagagataaaaaatgtcttactccagatcc caaacatcaaagagcaggatattcagagctttgatgaaaagatgatcttcataaaaaacccaaagcaaggagttgcagaa aagaaaaagaaggatagttttaagcgtttggtgtcagaagttatagggaagagtataggtcaacagtttaaaagggaggc tcagtacaggaatcttcctccaatcttcagaatcagacctccaaaagaagatataatgaagaaacaagaagatactggtc tttggtcattatttaatccatccaatggccacaatgtatga |
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Protein
| Protein ID | pfu_aug2.0_150.1_00325.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_150.1_00325.t1 MCVPVGLFLAQTVHKPIVRHFGLQLLEHVIKFRWNDMTQDQKDYLKENALELIAVGTRNLLEEEFHIKDAVSRITVELIK REWPQLWPNLQQDLYRLSQKGETQTELVLKIYLRVVEDAVLFQTIPNQRRREIMLALTSNMDDLFSFFVTVLKEHTDAVD QIQKSGQTVDPKVIQEHNMASEAALCTLAGYLDWVHMQHIMAKNALLLQMTCLLLSNSSLQLYAAECLHIIVSRRGKLED RKPLLVLFSEDAMNIVLRTVADAEAASSTDEYYYLFLKKLCLLLVELGKQLAALWGNLPEVGQPQNFSTYLEAVFAFTQH PSRMLCSYTQPLWALFFRHDHMSKDPILLSFIPRLIQGTHSTLVKAGFPTQNNSPSCEYSRHDFDSDDDFHQFLLKLRSE ISETLRLAAVLQPSPAIAYAFDWLKSQLTKPIDTGGGKDYCTLFSPSFLEWDAMTVCLECVISKLSNPKSIPELSTGVLL LNEVLNYQTQIFSAVTFNQEGQTKSTRSRAVKNVRQHACSILVKMCKQYADLIFPVFDQLYSHIKTISSDAEGLSQMEKC ILMEALILISNKSNNFMKQSEFLEEILRPVKEYYLSKEFTEAFWDPEKWMSFIGLDQAPVEPSSADTCGINRSRICYCTN MILAVLKRSKWPEEAQAAEEGGFMIGKRDDSTPIFRNPATSHISLLLENLLAFMKTMNAVWQPQYLQKRHPAFSRTYELL ENEKLAILGMPAPCVDITVNQNKLPSDRMQNFIVTTNDNNVEGAEDNMEAQEVIEDQLTRQLNREYMELLATALHMRRNE VVANVEEDRMDDIENPSAVQKEEVALSKLGCLCMLNKSVYPSIMMYVFSALTWTDYVACLRGCNLACSMMKQLVANGDAT SDIAGSFFYQVLCGLQVHGQHEGSQSSLLNLALKLYELLRPAFPEIKNVLLQIPNIKEQDIQSFDEKMIFIKNPKQGVAE KKKKDSFKRLVSEVIGKSIGQQFKREAQYRNLPPIFRIRPPKEDIMKKQEDTGLWSLFNPSNGHNV |
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